RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
ATP13A3-204ENST00000446356 HRH3Q9Y5N1 445 aa11.85□□□□□ -0.51
ATP13A3-204ENST00000446356 TMEM229AB2RXF0 380 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 VEGFBP49765 207 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 CLDN10P78369 228 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 POU4F2Q12837 409 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 CCDC155Q8N6L0 562 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 VRTNQ9H8Y1 702 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 SERPINA10Q9UK55 444 aa11.84□□□□□ -0.51
ATP13A3-204ENST00000446356 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
ATP13A3-204ENST00000446356 WFS1O76024 890 aa11.83□□□□□ -0.52
ATP13A3-204ENST00000446356 SMTNP53814 917 aa11.83□□□□□ -0.52
ATP13A3-204ENST00000446356 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
ATP13A3-204ENST00000446356 CFAP70Q5T0N1 1121 aa11.83□□□□□ -0.52
ATP13A3-204ENST00000446356 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 H3BM21 787 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 RFX1P22670 979 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 RHBDD1Q8TEB9 315 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 ZNF358Q9NW07 568 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
ATP13A3-204ENST00000446356 NFX1Q12986 1120 aaKnown RBP11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 LCE2AQ5TA79 106 aaPredicted RBP11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 SIX5Q8N196 739 aa11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 IRF7Q92985 503 aa11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 TIMMDC1Q9NPL8 285 aa11.81□□□□□ -0.52
ATP13A3-204ENST00000446356 A6NJY4 79 aa11.8□□□□□ -0.52
ATP13A3-204ENST00000446356 TREML4Q6UXN2 200 aa11.8□□□□□ -0.52
ATP13A3-204ENST00000446356 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
ATP13A3-204ENST00000446356 DYRK1BQ9Y463 629 aa11.79□□□□□ -0.52
ATP13A3-204ENST00000446356 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 ITGA6P23229 1130 aa11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 PHKA2P46019 1235 aa11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 NIFKQ9BYG3 293 aaKnown RBP11.78□□□□□ -0.52
ATP13A3-204ENST00000446356 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L21D6R901 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 SEC13P55735 322 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 MTFR1Q15390 333 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 C4orf17Q53FE4 359 aa11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
ATP13A3-204ENST00000446356 A0A1B0GTH6 734 aa11.76□□□□□ -0.53
ATP13A3-204ENST00000446356 CDK2AP1O14519 115 aa11.76□□□□□ -0.53
ATP13A3-204ENST00000446356 CRTC2Q53ET0 693 aaPredicted RBP11.76□□□□□ -0.53
ATP13A3-204ENST00000446356 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
ATP13A3-204ENST00000446356 CDC14CA4D256 554 aa11.75□□□□□ -0.53
ATP13A3-204ENST00000446356 M0R2N6 131 aa11.75□□□□□ -0.53
ATP13A3-204ENST00000446356 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
ATP13A3-204ENST00000446356 PTK7Q13308 1070 aa11.75□□□□□ -0.53
ATP13A3-204ENST00000446356 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
ATP13A3-204ENST00000446356 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
ATP13A3-204ENST00000446356 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
ATP13A3-204ENST00000446356 SCHIP1Q9P0W5 487 aaPredicted RBP11.74□□□□□ -0.53
ATP13A3-204ENST00000446356 TIMELESSQ9UNS1 1208 aa11.74□□□□□ -0.53
ATP13A3-204ENST00000446356 H7C1W4 665 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 DPYDQ12882 1025 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
ATP13A3-204ENST00000446356 F11P03951 625 aa11.72□□□□□ -0.53
ATP13A3-204ENST00000446356 VSIG8P0DPA2 414 aa11.72□□□□□ -0.53
ATP13A3-204ENST00000446356 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
ATP13A3-204ENST00000446356 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
ATP13A3-204ENST00000446356 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 SLC9A9Q8IVB4 645 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 TSEN2Q8NCE0 465 aaKnown RBP11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 AIDAQ96BJ3 306 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 GPAMQ9HCL2 828 aa11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 IQSEC3Q9UPP2 1182 aaPredicted RBP11.71□□□□□ -0.53
ATP13A3-204ENST00000446356 EPHA4P54764 986 aa11.7□□□□□ -0.54
ATP13A3-204ENST00000446356 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
ATP13A3-204ENST00000446356 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
ATP13A3-204ENST00000446356 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
ATP13A3-204ENST00000446356 HINFPQ9BQA5 517 aa11.7□□□□□ -0.54
ATP13A3-204ENST00000446356 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
ATP13A3-204ENST00000446356 FOXK2Q01167 660 aa11.69□□□□□ -0.54
ATP13A3-204ENST00000446356 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
ATP13A3-204ENST00000446356 VWA5B2Q8N398 1253 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms