RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 AEBP1Q8IUX7 1158 aa32.14■■■□□ 2.74
TMEM238-201ENST00000444469 LINC00116Q8NCU8 138 aa32.14■■■□□ 2.74
TMEM238-201ENST00000444469 MTHFSP49914 203 aa32.13■■■□□ 2.73
TMEM238-201ENST00000444469 GNPATO15228 680 aa32.12■■■□□ 2.73
TMEM238-201ENST00000444469 NLGN2Q8NFZ4 835 aa32.12■■■□□ 2.73
TMEM238-201ENST00000444469 RBM42Q9BTD8 480 aaKnown RBP32.12■■■□□ 2.73
TMEM238-201ENST00000444469 IL13P35225 146 aa32.1■■■□□ 2.73
TMEM238-201ENST00000444469 ITPK1Q13572 414 aa32.1■■■□□ 2.73
TMEM238-201ENST00000444469 CC2D1BQ5T0F9 858 aaKnown RBP32.09■■■□□ 2.73
TMEM238-201ENST00000444469 UBR3Q6ZT12 1888 aa32.06■■■□□ 2.72
TMEM238-201ENST00000444469 CD2APQ9Y5K6 639 aa32.06■■■□□ 2.72
TMEM238-201ENST00000444469 KDRP35968 1356 aa32.06■■■□□ 2.72
TMEM238-201ENST00000444469 SMIM5Q71RC9 77 aa32.05■■■□□ 2.72
TMEM238-201ENST00000444469 RTCBQ9Y3I0 505 aaKnown RBP32.05■■■□□ 2.72
TMEM238-201ENST00000444469 KDM6AO15550 1401 aaPredicted RBP32.05■■■□□ 2.72
TMEM238-201ENST00000444469 GRIN3BO60391 1043 aa32.04■■■□□ 2.72
TMEM238-201ENST00000444469 CNGB1Q14028 1251 aaPredicted RBP32.04■■■□□ 2.72
TMEM238-201ENST00000444469 AMIGO3Q86WK7 504 aa32.04■■■□□ 2.72
TMEM238-201ENST00000444469 CHD4Q14839 1912 aa32.04■■■□□ 2.72
TMEM238-201ENST00000444469 ZNF784Q8NCA9 323 aaPredicted RBP32.03■■■□□ 2.72
TMEM238-201ENST00000444469 PER1O15534 1290 aaPredicted RBP32.01■■■□□ 2.71
TMEM238-201ENST00000444469 DIAPH1O60610 1272 aaKnown RBP32.01■■■□□ 2.71
TMEM238-201ENST00000444469 HMOX1P09601 288 aa32■■■□□ 2.71
TMEM238-201ENST00000444469 AKAP4Q5JQC9 854 aa32■■■□□ 2.71
TMEM238-201ENST00000444469 TRAPPC3LQ5T215 181 aa32■■■□□ 2.71
TMEM238-201ENST00000444469 NFATC2IPQ8NCF5 419 aa32■■■□□ 2.71
TMEM238-201ENST00000444469 PTCD1O75127 700 aaKnown RBP31.99■■■□□ 2.71
TMEM238-201ENST00000444469 RC3H1Q5TC82 1133 aaKnown RBP31.97■■■□□ 2.71
TMEM238-201ENST00000444469 ZNF831Q5JPB2 1677 aa31.96■■■□□ 2.71
TMEM238-201ENST00000444469 ADRA2BP18089 450 aa31.96■■■□□ 2.71
TMEM238-201ENST00000444469 CNTNAP4Q9C0A0 1308 aa31.96■■■□□ 2.71
TMEM238-201ENST00000444469 SLC4A9Q96Q91 983 aa31.95■■■□□ 2.71
TMEM238-201ENST00000444469 NPC1L1Q9UHC9 1359 aa31.94■■■□□ 2.7
TMEM238-201ENST00000444469 YBX3P16989 372 aaKnown RBP eCLIP31.93■■■□□ 2.7
TMEM238-201ENST00000444469 RFC4P35249 363 aa31.93■■■□□ 2.7
TMEM238-201ENST00000444469 NLGN1Q8N2Q7 840 aa31.92■■■□□ 2.7
TMEM238-201ENST00000444469 U2SURPO15042 1029 aaKnown RBP31.91■■■□□ 2.7
TMEM238-201ENST00000444469 RPS6KA4O75676 772 aa31.91■■■□□ 2.7
TMEM238-201ENST00000444469 MMP10P09238 476 aa31.91■■■□□ 2.7
TMEM238-201ENST00000444469 SLC52A2Q9HAB3 445 aa31.9■■■□□ 2.7
TMEM238-201ENST00000444469 ARHGEF1Q92888 912 aaKnown RBP31.89■■■□□ 2.7
TMEM238-201ENST00000444469 COL5A3P25940 1745 aaPredicted RBP31.89■■■□□ 2.69
TMEM238-201ENST00000444469 SCN11AQ9UI33 1791 aa31.89■■■□□ 2.69
TMEM238-201ENST00000444469 RNMTO43148 476 aaKnown RBP31.87■■■□□ 2.69
TMEM238-201ENST00000444469 CRKLP46109 303 aaKnown RBP31.86■■■□□ 2.69
TMEM238-201ENST00000444469 CFAP53Q96M91 514 aa31.86■■■□□ 2.69
TMEM238-201ENST00000444469 MTHFSDQ2M296 383 aaKnown RBP31.85■■■□□ 2.69
TMEM238-201ENST00000444469 LGR6Q9HBX8 967 aa31.85■■■□□ 2.69
TMEM238-201ENST00000444469 WWC3Q9ULE0 1092 aa31.83■■■□□ 2.69
TMEM238-201ENST00000444469 PARP3Q9Y6F1 533 aa31.83■■■□□ 2.69
TMEM238-201ENST00000444469 UTRNP46939 3433 aa31.82■■■□□ 2.69
TMEM238-201ENST00000444469 CCDC87Q9NVE4 849 aa31.82■■■□□ 2.68
TMEM238-201ENST00000444469 GYS1P13807 737 aa31.81■■■□□ 2.68
TMEM238-201ENST00000444469 GAS2L2Q8NHY3 880 aa31.8■■■□□ 2.68
TMEM238-201ENST00000444469 MRC1P22897 1456 aa31.79■■■□□ 2.68
TMEM238-201ENST00000444469 CICQ96RK0 1608 aaPredicted RBP31.78■■■□□ 2.68
TMEM238-201ENST00000444469 SLC39A6Q13433 755 aa31.78■■■□□ 2.68
TMEM238-201ENST00000444469 DNAJC10Q8IXB1 793 aa31.78■■■□□ 2.68
TMEM238-201ENST00000444469 TTC5Q8N0Z6 440 aa31.78■■■□□ 2.68
TMEM238-201ENST00000444469 COL3A1P02461 1466 aaPredicted RBP31.78■■■□□ 2.68
TMEM238-201ENST00000444469 TJP1Q07157 1748 aa31.78■■■□□ 2.68
TMEM238-201ENST00000444469 GIGYF1O75420 1035 aaPredicted RBP31.77■■■□□ 2.68
TMEM238-201ENST00000444469 NUDCQ9Y266 331 aa31.77■■■□□ 2.68
TMEM238-201ENST00000444469 TGFB2P61812 414 aa31.76■■■□□ 2.67
TMEM238-201ENST00000444469 TEFQ10587 303 aa31.76■■■□□ 2.67
TMEM238-201ENST00000444469 GNAT3A8MTJ3 354 aa31.74■■■□□ 2.67
TMEM238-201ENST00000444469 ZPR1O75312 459 aa31.74■■■□□ 2.67
TMEM238-201ENST00000444469 C4AP0C0L4 1744 aa31.74■■■□□ 2.67
TMEM238-201ENST00000444469 USP42Q9H9J4 1324 aaKnown RBP31.74■■■□□ 2.67
TMEM238-201ENST00000444469 INTS5Q6P9B9 1019 aaKnown RBP31.73■■■□□ 2.67
TMEM238-201ENST00000444469 SRP68Q9UHB9 627 aaKnown RBP31.73■■■□□ 2.67
TMEM238-201ENST00000444469 MYH14Q7Z406 1995 aaKnown RBP31.73■■■□□ 2.67
TMEM238-201ENST00000444469 C10orf71Q711Q0 1435 aa31.72■■■□□ 2.67
TMEM238-201ENST00000444469 C1QTNF8P60827 252 aa31.71■■■□□ 2.67
TMEM238-201ENST00000444469 PXDNLA1KZ92 1463 aa31.71■■■□□ 2.67
TMEM238-201ENST00000444469 VSIG10Q8N0Z9 540 aa31.7■■■□□ 2.67
TMEM238-201ENST00000444469 VIRMAQ69YN4 1812 aaKnown RBP31.7■■■□□ 2.66
TMEM238-201ENST00000444469 CYP19A1P11511 503 aaPredicted RBP31.69■■■□□ 2.66
TMEM238-201ENST00000444469 BCS1LQ9Y276 419 aa31.69■■■□□ 2.66
TMEM238-201ENST00000444469 ADAMTS7Q9UKP4 1686 aa31.69■■■□□ 2.66
TMEM238-201ENST00000444469 ATP10DQ9P241 1426 aa31.68■■■□□ 2.66
TMEM238-201ENST00000444469 A0A0G2JLW4 131 aa31.68■■■□□ 2.66
TMEM238-201ENST00000444469 FKBP8Q14318 412 aa31.68■■■□□ 2.66
TMEM238-201ENST00000444469 KCPQ6ZWJ8 1503 aa31.68■■■□□ 2.66
TMEM238-201ENST00000444469 PRKAR2BP31323 418 aa31.67■■■□□ 2.66
TMEM238-201ENST00000444469 SOS1Q07889 1333 aaPredicted RBP31.67■■■□□ 2.66
TMEM238-201ENST00000444469 GOLGB1Q14789 3259 aaKnown RBP31.67■■■□□ 2.66
TMEM238-201ENST00000444469 KIF13BQ9NQT8 1826 aa31.66■■■□□ 2.66
TMEM238-201ENST00000444469 STARD3NLO95772 234 aa31.66■■■□□ 2.66
TMEM238-201ENST00000444469 U2AF1L5P0DN76 240 aaPredicted RBP31.66■■■□□ 2.66
TMEM238-201ENST00000444469 U2AF1Q01081 240 aaKnown RBP eCLIP31.66■■■□□ 2.66
TMEM238-201ENST00000444469 PPP2R1AP30153 589 aa31.65■■■□□ 2.66
TMEM238-201ENST00000444469 USPL1Q5W0Q7 1092 aa31.65■■■□□ 2.66
TMEM238-201ENST00000444469 GPBP1L1Q9HC44 474 aaPredicted RBP31.65■■■□□ 2.66
TMEM238-201ENST00000444469 SENP3-EIF4A1A0A087X0R7 540 aa31.64■■■□□ 2.66
TMEM238-201ENST00000444469 DPEP1P16444 411 aa31.64■■■□□ 2.66
TMEM238-201ENST00000444469 COL15A1P39059 1388 aa31.64■■■□□ 2.66
TMEM238-201ENST00000444469 FCHSD2O94868 740 aa31.63■■■□□ 2.65
TMEM238-201ENST00000444469 ZBTB1Q9Y2K1 713 aa31.63■■■□□ 2.65
TMEM238-201ENST00000444469 CANXP27824 592 aaKnown RBP31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms