RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
MRPL40-202ENST00000443660 ATG3Q9NT62 314 aa20.65■□□□□ 0.9
MRPL40-202ENST00000443660 PHKG2P15735 406 aa20.64■□□□□ 0.89
MRPL40-202ENST00000443660 EYA1Q99502 592 aa20.64■□□□□ 0.89
MRPL40-202ENST00000443660 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.89
MRPL40-202ENST00000443660 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
MRPL40-202ENST00000443660 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
MRPL40-202ENST00000443660 NMRK2Q9NPI5 230 aa20.63■□□□□ 0.89
MRPL40-202ENST00000443660 PARP3Q9Y6F1 533 aa20.63■□□□□ 0.89
MRPL40-202ENST00000443660 TOGARAM1Q9Y4F4 1720 aa20.63■□□□□ 0.89
MRPL40-202ENST00000443660 DPEP1P16444 411 aa20.62■□□□□ 0.89
MRPL40-202ENST00000443660 ADRA2BP18089 450 aa20.62■□□□□ 0.89
MRPL40-202ENST00000443660 RFC4P35249 363 aa20.62■□□□□ 0.89
MRPL40-202ENST00000443660 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
MRPL40-202ENST00000443660 ITGB4P16144 1822 aa20.62■□□□□ 0.89
MRPL40-202ENST00000443660 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
MRPL40-202ENST00000443660 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
MRPL40-202ENST00000443660 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
MRPL40-202ENST00000443660 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
MRPL40-202ENST00000443660 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
MRPL40-202ENST00000443660 C9orf131Q5VYM1 1079 aa20.59■□□□□ 0.89
MRPL40-202ENST00000443660 NCAPD2Q15021 1401 aa20.59■□□□□ 0.89
MRPL40-202ENST00000443660 ERVV-2B6SEH9 535 aa20.58■□□□□ 0.89
MRPL40-202ENST00000443660 RPS6KA4O75676 772 aa20.58■□□□□ 0.89
MRPL40-202ENST00000443660 GYS1P13807 737 aa20.58■□□□□ 0.89
MRPL40-202ENST00000443660 PIM2Q9P1W9 311 aa20.58■□□□□ 0.89
MRPL40-202ENST00000443660 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.88
MRPL40-202ENST00000443660 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
MRPL40-202ENST00000443660 FSTL1Q12841 308 aa20.57■□□□□ 0.88
MRPL40-202ENST00000443660 C10orf71Q711Q0 1435 aa20.57■□□□□ 0.88
MRPL40-202ENST00000443660 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
MRPL40-202ENST00000443660 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
MRPL40-202ENST00000443660 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
MRPL40-202ENST00000443660 DALRD3Q5D0E6 543 aaKnown RBP20.55■□□□□ 0.88
MRPL40-202ENST00000443660 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
MRPL40-202ENST00000443660 SLC4A9Q96Q91 983 aa20.55■□□□□ 0.88
MRPL40-202ENST00000443660 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
MRPL40-202ENST00000443660 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
MRPL40-202ENST00000443660 CNTNAP4Q9C0A0 1308 aa20.54■□□□□ 0.88
MRPL40-202ENST00000443660 KCNA3P22001 575 aa20.54■□□□□ 0.88
MRPL40-202ENST00000443660 CABP4P57796 275 aa20.53■□□□□ 0.88
MRPL40-202ENST00000443660 KDRP35968 1356 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 HTRA3P83110 453 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
MRPL40-202ENST00000443660 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.88
MRPL40-202ENST00000443660 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 RRAGCQ9HB90 399 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 RNF181Q9P0P0 153 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
MRPL40-202ENST00000443660 COL13A1Q5TAT6 717 aaPredicted RBP20.51■□□□□ 0.87
MRPL40-202ENST00000443660 N4BP2Q86UW6 1770 aaPredicted RBP20.5■□□□□ 0.87
MRPL40-202ENST00000443660 KIF13BQ9NQT8 1826 aa20.5■□□□□ 0.87
MRPL40-202ENST00000443660 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
MRPL40-202ENST00000443660 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
MRPL40-202ENST00000443660 AMOTQ4VCS5 1084 aa20.48■□□□□ 0.87
MRPL40-202ENST00000443660 CRKLP46109 303 aaKnown RBP20.47■□□□□ 0.87
MRPL40-202ENST00000443660 MTHFSP49914 203 aa20.47■□□□□ 0.87
MRPL40-202ENST00000443660 ZNF530Q6P9A1 599 aaPredicted RBP20.47■□□□□ 0.87
MRPL40-202ENST00000443660 SMC1BQ8NDV3 1235 aa20.47■□□□□ 0.87
MRPL40-202ENST00000443660 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
MRPL40-202ENST00000443660 KIAA1551Q9HCM1 1747 aa20.47■□□□□ 0.87
MRPL40-202ENST00000443660 CAPN15O75808 1086 aa20.46■□□□□ 0.87
MRPL40-202ENST00000443660 FKBP8Q14318 412 aa20.46■□□□□ 0.87
MRPL40-202ENST00000443660 TNS4Q8IZW8 715 aa20.46■□□□□ 0.87
MRPL40-202ENST00000443660 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
MRPL40-202ENST00000443660 KCPQ6ZWJ8 1503 aa20.45■□□□□ 0.86
MRPL40-202ENST00000443660 CHRNA5P30532 468 aa20.45■□□□□ 0.86
MRPL40-202ENST00000443660 C1orf141Q5JVX7 400 aa20.45■□□□□ 0.86
MRPL40-202ENST00000443660 USP42Q9H9J4 1324 aaKnown RBP20.45■□□□□ 0.86
MRPL40-202ENST00000443660 DDR1Q08345 913 aa20.44■□□□□ 0.86
MRPL40-202ENST00000443660 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
MRPL40-202ENST00000443660 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
MRPL40-202ENST00000443660 ZPR1O75312 459 aa20.43■□□□□ 0.86
MRPL40-202ENST00000443660 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
MRPL40-202ENST00000443660 ZNF831Q5JPB2 1677 aa20.42■□□□□ 0.86
MRPL40-202ENST00000443660 TM4SF1P30408 202 aa20.41■□□□□ 0.86
MRPL40-202ENST00000443660 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
MRPL40-202ENST00000443660 VEGFAP15692 232 aaPredicted RBP20.4■□□□□ 0.86
MRPL40-202ENST00000443660 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
MRPL40-202ENST00000443660 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
MRPL40-202ENST00000443660 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
MRPL40-202ENST00000443660 PRELPP51888 382 aa20.39■□□□□ 0.85
MRPL40-202ENST00000443660 LMNB1P20700 586 aa20.38■□□□□ 0.85
MRPL40-202ENST00000443660 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
MRPL40-202ENST00000443660 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
MRPL40-202ENST00000443660 GLTPD2A6NH11 291 aa20.37■□□□□ 0.85
MRPL40-202ENST00000443660 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
MRPL40-202ENST00000443660 RASSF7Q02833 373 aa20.36■□□□□ 0.85
MRPL40-202ENST00000443660 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
MRPL40-202ENST00000443660 BRCA1P38398 1863 aaKnown RBP20.35■□□□□ 0.85
MRPL40-202ENST00000443660 TTLL6Q8N841 843 aa20.35■□□□□ 0.85
MRPL40-202ENST00000443660 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
MRPL40-202ENST00000443660 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
MRPL40-202ENST00000443660 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
MRPL40-202ENST00000443660 HSPA1AP0DMV8 641 aaKnown RBP20.33■□□□□ 0.85
MRPL40-202ENST00000443660 HSPA1BP0DMV9 641 aaKnown RBP20.33■□□□□ 0.85
MRPL40-202ENST00000443660 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
MRPL40-202ENST00000443660 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
MRPL40-202ENST00000443660 SERPINB2P05120 415 aa20.32■□□□□ 0.84
MRPL40-202ENST00000443660 NFIXQ14938 502 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms