RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
PTPRE-203ENST00000442830 PANK3Q9H999 370 aa18.89■□□□□ 0.61
PTPRE-203ENST00000442830 YBX3P16989 372 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPRE-203ENST00000442830 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
PTPRE-203ENST00000442830 ASAP1Q9ULH1 1129 aa18.88■□□□□ 0.61
PTPRE-203ENST00000442830 GNPATO15228 680 aa18.87■□□□□ 0.61
PTPRE-203ENST00000442830 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
PTPRE-203ENST00000442830 KDRP35968 1356 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
PTPRE-203ENST00000442830 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
PTPRE-203ENST00000442830 RTCBQ9Y3I0 505 aaKnown RBP18.85■□□□□ 0.61
PTPRE-203ENST00000442830 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
PTPRE-203ENST00000442830 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
PTPRE-203ENST00000442830 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
PTPRE-203ENST00000442830 CNTNAP4Q9C0A0 1308 aa18.83■□□□□ 0.61
PTPRE-203ENST00000442830 CABP4P57796 275 aa18.83■□□□□ 0.6
PTPRE-203ENST00000442830 ITPK1Q13572 414 aa18.83■□□□□ 0.6
PTPRE-203ENST00000442830 TRAPPC3LQ5T215 181 aa18.83■□□□□ 0.6
PTPRE-203ENST00000442830 NLGN1Q8N2Q7 840 aa18.83■□□□□ 0.6
PTPRE-203ENST00000442830 CICQ96RK0 1608 aaPredicted RBP18.82■□□□□ 0.6
PTPRE-203ENST00000442830 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
PTPRE-203ENST00000442830 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
PTPRE-203ENST00000442830 MTHFSP49914 203 aa18.81■□□□□ 0.6
PTPRE-203ENST00000442830 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
PTPRE-203ENST00000442830 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-203ENST00000442830 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
PTPRE-203ENST00000442830 TGFB2P61812 414 aa18.79■□□□□ 0.6
PTPRE-203ENST00000442830 ADCY9O60503 1353 aa18.79■□□□□ 0.6
PTPRE-203ENST00000442830 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
PTPRE-203ENST00000442830 MMP10P09238 476 aa18.78■□□□□ 0.6
PTPRE-203ENST00000442830 RFC4P35249 363 aa18.78■□□□□ 0.6
PTPRE-203ENST00000442830 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
PTPRE-203ENST00000442830 C4AP0C0L4 1744 aa18.77■□□□□ 0.6
PTPRE-203ENST00000442830 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
PTPRE-203ENST00000442830 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
PTPRE-203ENST00000442830 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
PTPRE-203ENST00000442830 VIRMAQ69YN4 1812 aaKnown RBP18.76■□□□□ 0.59
PTPRE-203ENST00000442830 C10orf71Q711Q0 1435 aa18.75■□□□□ 0.59
PTPRE-203ENST00000442830 IL13P35225 146 aa18.75■□□□□ 0.59
PTPRE-203ENST00000442830 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
PTPRE-203ENST00000442830 PARP3Q9Y6F1 533 aa18.75■□□□□ 0.59
PTPRE-203ENST00000442830 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
PTPRE-203ENST00000442830 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
PTPRE-203ENST00000442830 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
PTPRE-203ENST00000442830 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
PTPRE-203ENST00000442830 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-203ENST00000442830 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-203ENST00000442830 SMIM5Q71RC9 77 aa18.73■□□□□ 0.59
PTPRE-203ENST00000442830 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
PTPRE-203ENST00000442830 TJP1Q07157 1748 aa18.73■□□□□ 0.59
PTPRE-203ENST00000442830 BRCA1P38398 1863 aaKnown RBP18.73■□□□□ 0.59
PTPRE-203ENST00000442830 GYS1P13807 737 aa18.72■□□□□ 0.59
PTPRE-203ENST00000442830 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
PTPRE-203ENST00000442830 ARFGEF1Q9Y6D6 1849 aa18.72■□□□□ 0.59
PTPRE-203ENST00000442830 MRC1P22897 1456 aa18.71■□□□□ 0.59
PTPRE-203ENST00000442830 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
PTPRE-203ENST00000442830 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
PTPRE-203ENST00000442830 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
PTPRE-203ENST00000442830 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
PTPRE-203ENST00000442830 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
PTPRE-203ENST00000442830 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
PTPRE-203ENST00000442830 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
PTPRE-203ENST00000442830 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
PTPRE-203ENST00000442830 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
PTPRE-203ENST00000442830 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
PTPRE-203ENST00000442830 ZPR1O75312 459 aa18.65■□□□□ 0.58
PTPRE-203ENST00000442830 UBR2Q8IWV8 1755 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 A0A0G2JLW4 131 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
PTPRE-203ENST00000442830 FCHSD2O94868 740 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
PTPRE-203ENST00000442830 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 WWC3Q9ULE0 1092 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 CEP350Q5VT06 3117 aa18.64■□□□□ 0.57
PTPRE-203ENST00000442830 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
PTPRE-203ENST00000442830 DPEP1P16444 411 aa18.63■□□□□ 0.57
PTPRE-203ENST00000442830 HSPA6P17066 643 aa18.63■□□□□ 0.57
PTPRE-203ENST00000442830 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
PTPRE-203ENST00000442830 ARHGAP27Q6ZUM4 889 aa18.62■□□□□ 0.57
PTPRE-203ENST00000442830 SOS1Q07889 1333 aaPredicted RBP18.62■□□□□ 0.57
PTPRE-203ENST00000442830 KCPQ6ZWJ8 1503 aa18.61■□□□□ 0.57
PTPRE-203ENST00000442830 HMOX1P09601 288 aa18.61■□□□□ 0.57
PTPRE-203ENST00000442830 FKBP8Q14318 412 aa18.61■□□□□ 0.57
PTPRE-203ENST00000442830 COL15A1P39059 1388 aa18.6■□□□□ 0.57
PTPRE-203ENST00000442830 CYP19A1P11511 503 aaPredicted RBP18.6■□□□□ 0.57
PTPRE-203ENST00000442830 DALRD3Q5D0E6 543 aaKnown RBP18.6■□□□□ 0.57
PTPRE-203ENST00000442830 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
PTPRE-203ENST00000442830 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
PTPRE-203ENST00000442830 GAS2L2Q8NHY3 880 aa18.6■□□□□ 0.57
PTPRE-203ENST00000442830 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
PTPRE-203ENST00000442830 STARD3NLO95772 234 aa18.59■□□□□ 0.57
PTPRE-203ENST00000442830 TM4SF1P30408 202 aa18.59■□□□□ 0.57
PTPRE-203ENST00000442830 MTHFSDQ2M296 383 aaKnown RBP18.59■□□□□ 0.57
PTPRE-203ENST00000442830 CC2D1BQ5T0F9 858 aaKnown RBP18.59■□□□□ 0.57
PTPRE-203ENST00000442830 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
PTPRE-203ENST00000442830 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms