RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RBCK1Q9BYM8 510 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 PPP1R1BQ9UD71 204 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 RGS20O76081 388 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 TREHO43280 583 aa6.22□□□□□ -1.41
CDC42BPA-207ENST00000441725 FAM13AO94988 1023 aa6.22□□□□□ -1.41
CDC42BPA-207ENST00000441725 IGFBP4P22692 258 aa6.22□□□□□ -1.41
CDC42BPA-207ENST00000441725 HDLBPQ00341 1268 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-207ENST00000441725 FOXO3O43524 673 aa6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 MYCP01106 439 aaPredicted RBP6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 SCG3Q8WXD2 468 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 FAM161BQ96MY7 647 aa6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 SAP130Q9H0E3 1048 aa6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 BCL11AQ9H165 835 aa6.21□□□□□ -1.41
CDC42BPA-207ENST00000441725 FMR1Q06787 632 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■□□ 18.6
CDC42BPA-207ENST00000441725 PPP1R18Q6NYC8 613 aa6.21□□□□□ -1.42
CDC42BPA-207ENST00000441725 TNS4Q8IZW8 715 aa6.21□□□□□ -1.42
CDC42BPA-207ENST00000441725 SCAMP3O14828 347 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 NDUFB5O43674 189 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 SCNN1DP51172 638 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 UBXN4Q92575 508 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 KCTD15Q96SI1 283 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 SLC6A16Q9GZN6 736 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 RNF19AQ9NV58 838 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 SH3BP2P78314 561 aa6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 TSPAN10Q9H1Z9 355 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 CDK11AQ9UQ88 783 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-207ENST00000441725 ATAD2Q6PL18 1390 aa6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 MAPK8P45983 427 aa6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 EPHA4P54764 986 aa6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 SF3A1Q15459 793 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 TMC1Q8TDI8 760 aa6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 CHMP7Q8WUX9 453 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 CCDC87Q9NVE4 849 aa6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 CDV3Q9UKY7 258 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 FCF1Q9Y324 198 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-207ENST00000441725 ERVH48-1M5A8F1 160 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 GGCXP38435 758 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 RAD51AP2Q09MP3 1159 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 INTS6LQ5JSJ4 861 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 BRPF3Q9ULD4 1205 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 A0A1W2PRU2 124 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 IGHA2P01877 340 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 EIF1AXP47813 144 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 GDF10P55107 478 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 DSC3Q14574 896 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 C16orf46Q6P387 395 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 PIK3R5Q8WYR1 880 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
CDC42BPA-207ENST00000441725 FZD6O60353 706 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 LDHBP07195 334 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 ERVK-9P63128 1117 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 EHHADHQ08426 723 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 TMEM87AQ8NBN3 555 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 DUSP9Q99956 384 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 PRKD2Q9BZL6 878 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 OSBPL3Q9H4L5 887 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 GPR182O15218 404 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 S1PR4O95977 384 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 XPCQ01831 940 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 NT5DC4Q86YG4 428 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 VTI1AQ96AJ9 217 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 WWC3Q9ULE0 1092 aa6.17□□□□□ -1.42
CDC42BPA-207ENST00000441725 WASLO00401 505 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 AAMPQ13685 434 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 SPATA32Q96LK8 384 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 SETDB2Q96T68 719 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 TNFRSF10BO14763 440 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 BACH1O14867 736 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 INHAP05111 366 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 TBCELQ5QJ74 424 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 COX20Q5RI15 118 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 CC2D2BQ6DHV5 1058 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 CITED4Q96RK1 184 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 ETNK1Q9HBU6 452 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 MRS2Q9HD23 443 aa6.16□□□□□ -1.42
CDC42BPA-207ENST00000441725 RNF223E7ERA6 249 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 PLCB3Q01970 1234 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 VASH1Q7L8A9 365 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 TMC4Q7Z404 712 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 DMRTB1Q96MA1 342 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 FAM129BQ96TA1 746 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 STIM2Q9P246 746 aa6.15□□□□□ -1.43
CDC42BPA-207ENST00000441725 PPP1R12BO60237 982 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 SORBS3O60504 671 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 DAB2P98082 770 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 FANCCQ00597 558 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 FAM26DQ5JW98 314 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 ESF1Q9H501 851 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 CYLDQ9NQC7 956 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 TMPRSS4Q9NRS4 437 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 ZBTB39O15060 712 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 ATCAYQ86WG3 371 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms