RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 CCDC87Q9NVE4 849 aa25.93■■□□□ 1.74
HDLBP-218ENST00000441124 TMF1P82094 1093 aa25.92■■□□□ 1.74
HDLBP-218ENST00000441124 TRAPPC3LQ5T215 181 aa25.92■■□□□ 1.74
HDLBP-218ENST00000441124 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
HDLBP-218ENST00000441124 NKX1-1Q15270 411 aaPredicted RBP25.91■■□□□ 1.74
HDLBP-218ENST00000441124 NLGN1Q8N2Q7 840 aa25.91■■□□□ 1.74
HDLBP-218ENST00000441124 RTCBQ9Y3I0 505 aaKnown RBP25.91■■□□□ 1.74
HDLBP-218ENST00000441124 WDR90Q96KV7 1748 aa25.91■■□□□ 1.74
HDLBP-218ENST00000441124 ITGB4P16144 1822 aa25.91■■□□□ 1.74
HDLBP-218ENST00000441124 C10orf71Q711Q0 1435 aa25.89■■□□□ 1.74
HDLBP-218ENST00000441124 FSTL1Q12841 308 aa25.89■■□□□ 1.74
HDLBP-218ENST00000441124 JMYQ8N9B5 988 aa25.89■■□□□ 1.74
HDLBP-218ENST00000441124 EMILIN1Q9Y6C2 1016 aa25.89■■□□□ 1.74
HDLBP-218ENST00000441124 N4BP2Q86UW6 1770 aaPredicted RBP25.89■■□□□ 1.73
HDLBP-218ENST00000441124 PARP3Q9Y6F1 533 aa25.88■■□□□ 1.73
HDLBP-218ENST00000441124 ATG3Q9NT62 314 aa25.87■■□□□ 1.73
HDLBP-218ENST00000441124 KDM2BQ8NHM5 1336 aa25.87■■□□□ 1.73
HDLBP-218ENST00000441124 TONSLQ96HA7 1378 aa25.86■■□□□ 1.73
HDLBP-218ENST00000441124 PLEKHG2Q9H7P9 1386 aa25.86■■□□□ 1.73
HDLBP-218ENST00000441124 RBM42Q9BTD8 480 aaKnown RBP25.86■■□□□ 1.73
HDLBP-218ENST00000441124 RNF181Q9P0P0 153 aa25.86■■□□□ 1.73
HDLBP-218ENST00000441124 KIF24Q5T7B8 1368 aa25.85■■□□□ 1.73
HDLBP-218ENST00000441124 KCPQ6ZWJ8 1503 aa25.85■■□□□ 1.73
HDLBP-218ENST00000441124 RRAGCQ9HB90 399 aa25.85■■□□□ 1.73
HDLBP-218ENST00000441124 MAP2P11137 1827 aaKnown RBP25.84■■□□□ 1.73
HDLBP-218ENST00000441124 RFC4P35249 363 aa25.84■■□□□ 1.73
HDLBP-218ENST00000441124 ARHGEF1Q92888 912 aaKnown RBP25.84■■□□□ 1.73
HDLBP-218ENST00000441124 PKD1L3Q7Z443 1732 aa25.83■■□□□ 1.73
HDLBP-218ENST00000441124 KIAA1551Q9HCM1 1747 aa25.83■■□□□ 1.73
HDLBP-218ENST00000441124 SLC24A1O60721 1099 aa25.83■■□□□ 1.73
HDLBP-218ENST00000441124 IFNL2Q8IZJ0 200 aa25.83■■□□□ 1.73
HDLBP-218ENST00000441124 PIM2Q9P1W9 311 aa25.83■■□□□ 1.73
HDLBP-218ENST00000441124 GYS1P13807 737 aa25.82■■□□□ 1.72
HDLBP-218ENST00000441124 PHKG2P15735 406 aa25.82■■□□□ 1.72
HDLBP-218ENST00000441124 PRELPP51888 382 aa25.82■■□□□ 1.72
HDLBP-218ENST00000441124 DALRD3Q5D0E6 543 aaKnown RBP25.81■■□□□ 1.72
HDLBP-218ENST00000441124 KIF13BQ9NQT8 1826 aa25.8■■□□□ 1.72
HDLBP-218ENST00000441124 KCNA3P22001 575 aa25.8■■□□□ 1.72
HDLBP-218ENST00000441124 ADRA2BP18089 450 aa25.79■■□□□ 1.72
HDLBP-218ENST00000441124 EYA1Q99502 592 aa25.79■■□□□ 1.72
HDLBP-218ENST00000441124 SMC1BQ8NDV3 1235 aa25.78■■□□□ 1.72
HDLBP-218ENST00000441124 SLC4A9Q96Q91 983 aa25.78■■□□□ 1.72
HDLBP-218ENST00000441124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.722e-15■□□□□ 10.1
HDLBP-218ENST00000441124 C4AP0C0L4 1744 aa25.77■■□□□ 1.72
HDLBP-218ENST00000441124 DCAF5Q96JK2 942 aa25.77■■□□□ 1.72
HDLBP-218ENST00000441124 KDRP35968 1356 aa25.77■■□□□ 1.72
HDLBP-218ENST00000441124 RPS6KA4O75676 772 aa25.76■■□□□ 1.71
HDLBP-218ENST00000441124 RC3H1Q5TC82 1133 aaKnown RBP25.76■■□□□ 1.71
HDLBP-218ENST00000441124 NCAPD2Q15021 1401 aa25.75■■□□□ 1.71
HDLBP-218ENST00000441124 CNTNAP4Q9C0A0 1308 aa25.74■■□□□ 1.71
HDLBP-218ENST00000441124 CHRNA5P30532 468 aa25.74■■□□□ 1.71
HDLBP-218ENST00000441124 HSPA1AP0DMV8 641 aaKnown RBP25.73■■□□□ 1.71
HDLBP-218ENST00000441124 HSPA1BP0DMV9 641 aaKnown RBP25.73■■□□□ 1.71
HDLBP-218ENST00000441124 SRP68Q9UHB9 627 aaKnown RBP25.73■■□□□ 1.71
HDLBP-218ENST00000441124 KIF20BQ96Q89 1820 aa25.72■■□□□ 1.71
HDLBP-218ENST00000441124 WASHC2AQ641Q2 1341 aa25.71■■□□□ 1.71
HDLBP-218ENST00000441124 FKBP8Q14318 412 aa25.7■■□□□ 1.7
HDLBP-218ENST00000441124 CARD14Q9BXL6 1004 aa25.7■■□□□ 1.7
HDLBP-218ENST00000441124 ERVV-2B6SEH9 535 aa25.69■■□□□ 1.7
HDLBP-218ENST00000441124 RASSF7Q02833 373 aa25.69■■□□□ 1.7
HDLBP-218ENST00000441124 DDR1Q08345 913 aa25.69■■□□□ 1.7
HDLBP-218ENST00000441124 PTCD1O75127 700 aaKnown RBP25.68■■□□□ 1.7
HDLBP-218ENST00000441124 CABP4P57796 275 aa25.68■■□□□ 1.7
HDLBP-218ENST00000441124 CDCA8Q53HL2 280 aa25.67■■□□□ 1.7
HDLBP-218ENST00000441124 BRCA1P38398 1863 aaKnown RBP25.66■■□□□ 1.7
HDLBP-218ENST00000441124 CRKLP46109 303 aaKnown RBP25.66■■□□□ 1.7
HDLBP-218ENST00000441124 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
HDLBP-218ENST00000441124 ARFGEF1Q9Y6D6 1849 aa25.65■■□□□ 1.7
HDLBP-218ENST00000441124 USP42Q9H9J4 1324 aaKnown RBP25.64■■□□□ 1.7
HDLBP-218ENST00000441124 VEGFAP15692 232 aaPredicted RBP25.64■■□□□ 1.7
HDLBP-218ENST00000441124 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
HDLBP-218ENST00000441124 EIF4A2Q14240 407 aaKnown RBP25.64■■□□□ 1.7
HDLBP-218ENST00000441124 TNRC6CQ9HCJ0 1690 aaKnown RBP25.64■■□□□ 1.69
HDLBP-218ENST00000441124 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
HDLBP-218ENST00000441124 POLKQ9UBT6 870 aa25.63■■□□□ 1.69
HDLBP-218ENST00000441124 PLEKHO1Q53GL0 409 aaPredicted RBP25.61■■□□□ 1.69
HDLBP-218ENST00000441124 GLTPD2A6NH11 291 aa25.6■■□□□ 1.69
HDLBP-218ENST00000441124 POLRMTO00411 1230 aaKnown RBP25.6■■□□□ 1.69
HDLBP-218ENST00000441124 LMNB1P20700 586 aa25.6■■□□□ 1.69
HDLBP-218ENST00000441124 PCNTO95613 3336 aa25.6■■□□□ 1.69
HDLBP-218ENST00000441124 COL5A3P25940 1745 aaPredicted RBP25.59■■□□□ 1.69
HDLBP-218ENST00000441124 ZC3H4Q9UPT8 1303 aaKnown RBP25.59■■□□□ 1.69
HDLBP-218ENST00000441124 KDM6AO15550 1401 aaPredicted RBP25.58■■□□□ 1.69
HDLBP-218ENST00000441124 ZPR1O75312 459 aa25.58■■□□□ 1.69
HDLBP-218ENST00000441124 MTHFSP49914 203 aa25.58■■□□□ 1.69
HDLBP-218ENST00000441124 ZNF831Q5JPB2 1677 aa25.57■■□□□ 1.68
HDLBP-218ENST00000441124 USPL1Q5W0Q7 1092 aa25.56■■□□□ 1.68
HDLBP-218ENST00000441124 ANKRD26Q9UPS8 1709 aa25.55■■□□□ 1.68
HDLBP-218ENST00000441124 TM4SF1P30408 202 aa25.55■■□□□ 1.68
HDLBP-218ENST00000441124 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
HDLBP-218ENST00000441124 NFATC2IPQ8NCF5 419 aa25.55■■□□□ 1.68
HDLBP-218ENST00000441124 MYH14Q7Z406 1995 aaKnown RBP25.54■■□□□ 1.68
HDLBP-218ENST00000441124 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
HDLBP-218ENST00000441124 MKRN1Q9UHC7 482 aaKnown RBP25.53■■□□□ 1.68
HDLBP-218ENST00000441124 AMOTQ4VCS5 1084 aa25.52■■□□□ 1.68
HDLBP-218ENST00000441124 TTLL6Q8N841 843 aa25.52■■□□□ 1.68
HDLBP-218ENST00000441124 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
HDLBP-218ENST00000441124 SBF1O95248 1867 aa25.5■■□□□ 1.67
HDLBP-218ENST00000441124 NFIXQ14938 502 aa25.5■■□□□ 1.67
HDLBP-218ENST00000441124 C2CD5Q86YS7 1000 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms