RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 ABTB2Q8N961 1025 aa30.67■■■□□ 2.5
LMBR1-209ENST00000434453 NECTIN2Q92692 538 aa30.67■■■□□ 2.5
LMBR1-209ENST00000434453 LTN1O94822 1766 aa30.67■■■□□ 2.5
LMBR1-209ENST00000434453 FKBP5Q13451 457 aaPredicted RBP30.67■■■□□ 2.5
LMBR1-209ENST00000434453 EXOC6BQ9Y2D4 811 aa30.67■■■□□ 2.5
LMBR1-209ENST00000434453 PNMA6EA0A0J9YXQ4 647 aa30.65■■■□□ 2.5
LMBR1-209ENST00000434453 LTV1Q96GA3 475 aaPredicted RBP30.65■■■□□ 2.5
LMBR1-209ENST00000434453 CASC1Q6TDU7 716 aa30.65■■■□□ 2.5
LMBR1-209ENST00000434453 CLEC17AQ6ZS10 378 aa30.65■■■□□ 2.5
LMBR1-209ENST00000434453 TAF7Q15545 349 aaPredicted RBP30.63■■■□□ 2.49
LMBR1-209ENST00000434453 GNAI3P08754 354 aa30.62■■■□□ 2.49
LMBR1-209ENST00000434453 TSHZ3Q63HK5 1081 aa30.62■■■□□ 2.49
LMBR1-209ENST00000434453 USHBP1Q8N6Y0 703 aa30.62■■■□□ 2.49
LMBR1-209ENST00000434453 SOS1Q07889 1333 aaPredicted RBP30.61■■■□□ 2.49
LMBR1-209ENST00000434453 SETD1BQ9UPS6 1966 aaKnown RBP30.61■■■□□ 2.49
LMBR1-209ENST00000434453 REC8O95072 547 aa30.61■■■□□ 2.49
LMBR1-209ENST00000434453 BABAM1Q9NWV8 329 aa30.61■■■□□ 2.49
LMBR1-209ENST00000434453 ERC2O15083 957 aa30.61■■■□□ 2.49
LMBR1-209ENST00000434453 ATP8B2P98198 1209 aa30.61■■■□□ 2.49
LMBR1-209ENST00000434453 MRE11P49959 708 aa30.6■■■□□ 2.49
LMBR1-209ENST00000434453 PXDNLA1KZ92 1463 aa30.59■■■□□ 2.49
LMBR1-209ENST00000434453 IBTKQ9P2D0 1353 aaPredicted RBP30.59■■■□□ 2.49
LMBR1-209ENST00000434453 CHD2O14647 1828 aaKnown RBP30.59■■■□□ 2.49
LMBR1-209ENST00000434453 LRRCC1Q9C099 1032 aa30.58■■■□□ 2.49
LMBR1-209ENST00000434453 USP44Q9H0E7 712 aa30.58■■■□□ 2.49
LMBR1-209ENST00000434453 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
LMBR1-209ENST00000434453 SKOR2Q2VWA4 1001 aaPredicted RBP30.57■■■□□ 2.48
LMBR1-209ENST00000434453 LRRFIP2Q9Y608 721 aaKnown RBP30.57■■■□□ 2.48
LMBR1-209ENST00000434453 NFAT5O94916 1531 aa30.57■■■□□ 2.48
LMBR1-209ENST00000434453 GAS2L3Q86XJ1 694 aa30.57■■■□□ 2.48
LMBR1-209ENST00000434453 GRPEL1Q9HAV7 217 aa30.57■■■□□ 2.48
LMBR1-209ENST00000434453 CEMIPQ8WUJ3 1361 aa30.56■■■□□ 2.48
LMBR1-209ENST00000434453 BAG4O95429 457 aaKnown RBP30.56■■■□□ 2.48
LMBR1-209ENST00000434453 CYP2E1P05181 493 aaPredicted RBP30.56■■■□□ 2.48
LMBR1-209ENST00000434453 RRAGDQ9NQL2 400 aaPredicted RBP30.56■■■□□ 2.48
LMBR1-209ENST00000434453 PHF8Q9UPP1 1060 aa30.55■■■□□ 2.48
LMBR1-209ENST00000434453 MED1Q15648 1581 aaPredicted RBP30.55■■■□□ 2.48
LMBR1-209ENST00000434453 PTMSP20962 102 aa30.55■■■□□ 2.48
LMBR1-209ENST00000434453 ISY1Q9ULR0 285 aaKnown RBP30.55■■■□□ 2.48
LMBR1-209ENST00000434453 MX1P20591 662 aa30.54■■■□□ 2.48
LMBR1-209ENST00000434453 PHAXQ9H814 394 aaKnown RBP30.54■■■□□ 2.48
LMBR1-209ENST00000434453 RGPD2P0DJD1 1756 aa30.54■■■□□ 2.48
LMBR1-209ENST00000434453 PKP1Q13835 747 aa30.54■■■□□ 2.48
LMBR1-209ENST00000434453 ANO8Q9HCE9 1232 aaPredicted RBP30.54■■■□□ 2.48
LMBR1-209ENST00000434453 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
LMBR1-209ENST00000434453 IP6K1Q92551 441 aa30.53■■■□□ 2.48
LMBR1-209ENST00000434453 ST18O60284 1047 aa30.52■■■□□ 2.48
LMBR1-209ENST00000434453 HDGFL1Q5TGJ6 251 aa30.52■■■□□ 2.48
LMBR1-209ENST00000434453 NBPF6Q5VWK0 638 aa30.51■■■□□ 2.48
LMBR1-209ENST00000434453 NBPF4Q96M43 638 aa30.51■■■□□ 2.48
LMBR1-209ENST00000434453 KDM3BQ7LBC6 1761 aa30.51■■■□□ 2.48
LMBR1-209ENST00000434453 ZGPATQ8N5A5 531 aaKnown RBP30.51■■■□□ 2.47
LMBR1-209ENST00000434453 ESYT1Q9BSJ8 1104 aa30.51■■■□□ 2.47
LMBR1-209ENST00000434453 STAP2Q9UGK3 403 aa30.51■■■□□ 2.47
LMBR1-209ENST00000434453 RBM33Q96EV2 1170 aaKnown RBP30.5■■■□□ 2.47
LMBR1-209ENST00000434453 NUCB2P80303 420 aa30.49■■■□□ 2.47
LMBR1-209ENST00000434453 LGR6Q9HBX8 967 aa30.49■■■□□ 2.47
LMBR1-209ENST00000434453 UBTFL1P0CB47 393 aaPredicted RBP30.48■■■□□ 2.47
LMBR1-209ENST00000434453 SSH3Q8TE77 659 aa30.47■■■□□ 2.47
LMBR1-209ENST00000434453 CWC22Q9HCG8 908 aaKnown RBP30.47■■■□□ 2.47
LMBR1-209ENST00000434453 CHMLP26374 656 aa30.47■■■□□ 2.47
LMBR1-209ENST00000434453 EIF4A1P60842 406 aaKnown RBP30.47■■■□□ 2.47
LMBR1-209ENST00000434453 GOLGA6L22H0YM25 854 aa30.46■■■□□ 2.47
LMBR1-209ENST00000434453 UNC5CLQ8IV45 518 aa30.46■■■□□ 2.47
LMBR1-209ENST00000434453 PHRF1Q9P1Y6 1649 aaKnown RBP30.46■■■□□ 2.47
LMBR1-209ENST00000434453 LMO7Q8WWI1 1683 aa30.45■■■□□ 2.47
LMBR1-209ENST00000434453 KLHL40Q2TBA0 621 aa30.45■■■□□ 2.46
LMBR1-209ENST00000434453 ZDHHC9Q9Y397 364 aa30.45■■■□□ 2.46
LMBR1-209ENST00000434453 KCNQ3O43525 872 aa30.43■■■□□ 2.46
LMBR1-209ENST00000434453 PALD1Q9ULE6 856 aa30.43■■■□□ 2.46
LMBR1-209ENST00000434453 POLA2Q14181 598 aa30.43■■■□□ 2.46
LMBR1-209ENST00000434453 SRCIN1Q9C0H9 1055 aa30.43■■■□□ 2.46
LMBR1-209ENST00000434453 EIF2S2P20042 333 aaKnown RBP30.42■■■□□ 2.46
LMBR1-209ENST00000434453 RILPL2Q969X0 211 aa30.42■■■□□ 2.46
LMBR1-209ENST00000434453 IL1RAPL2Q9NP60 686 aa30.42■■■□□ 2.46
LMBR1-209ENST00000434453 MCTP1Q6DN14 999 aa30.42■■■□□ 2.46
LMBR1-209ENST00000434453 TRIM6-TRIM34B2RNG4 842 aa30.41■■■□□ 2.46
LMBR1-209ENST00000434453 NEK4P51957 841 aa30.41■■■□□ 2.46
LMBR1-209ENST00000434453 PPP1R42Q7Z4L9 355 aa30.41■■■□□ 2.46
LMBR1-209ENST00000434453 CHPF2Q9P2E5 772 aa30.41■■■□□ 2.46
LMBR1-209ENST00000434453 DDX49Q9Y6V7 483 aaKnown RBP30.41■■■□□ 2.46
LMBR1-209ENST00000434453 LMBRD1Q9NUN5 540 aa30.41■■■□□ 2.46
LMBR1-209ENST00000434453 AOX1Q06278 1338 aa30.4■■■□□ 2.46
LMBR1-209ENST00000434453 HOXB7P09629 217 aa30.39■■■□□ 2.46
LMBR1-209ENST00000434453 LRRC59Q96AG4 307 aaKnown RBP30.39■■■□□ 2.46
LMBR1-209ENST00000434453 IL25Q9H293 177 aa30.39■■■□□ 2.46
LMBR1-209ENST00000434453 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.39■■■□□ 2.46
LMBR1-209ENST00000434453 ADGRL3Q9HAR2 1447 aa30.39■■■□□ 2.46
LMBR1-209ENST00000434453 NBPF7P0C2Y1 421 aaPredicted RBP30.39■■■□□ 2.46
LMBR1-209ENST00000434453 TMX3Q96JJ7 454 aa30.38■■■□□ 2.45
LMBR1-209ENST00000434453 ESCO1Q5FWF5 840 aa30.38■■■□□ 2.45
LMBR1-209ENST00000434453 BEND3Q5T5X7 828 aa30.38■■■□□ 2.45
LMBR1-209ENST00000434453 ANKLE2Q86XL3 938 aa30.38■■■□□ 2.45
LMBR1-209ENST00000434453 IL17RAQ96F46 866 aa30.38■■■□□ 2.45
LMBR1-209ENST00000434453 PSME1Q06323 249 aa30.37■■■□□ 2.45
LMBR1-209ENST00000434453 NUTM1Q86Y26 1132 aa30.37■■■□□ 2.45
LMBR1-209ENST00000434453 ANO2Q9NQ90 1003 aa30.37■■■□□ 2.45
LMBR1-209ENST00000434453 ZNF142P52746 1687 aaPredicted RBP30.35■■■□□ 2.45
LMBR1-209ENST00000434453 PI4KAP2A4QPH2 592 aa30.35■■■□□ 2.45
LMBR1-209ENST00000434453 SURF6O75683 361 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms