RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
RPL28-204ENST00000431533 IGSF1Q8N6C5 1336 aa20.88■□□□□ 0.93
RPL28-204ENST00000431533 GNPATO15228 680 aa20.88■□□□□ 0.93
RPL28-204ENST00000431533 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
RPL28-204ENST00000431533 CC2D1BQ5T0F9 858 aaKnown RBP20.87■□□□□ 0.93
RPL28-204ENST00000431533 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
RPL28-204ENST00000431533 UBR3Q6ZT12 1888 aa20.87■□□□□ 0.93
RPL28-204ENST00000431533 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
RPL28-204ENST00000431533 ERVV-2B6SEH9 535 aa20.85■□□□□ 0.93
RPL28-204ENST00000431533 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
RPL28-204ENST00000431533 RTCBQ9Y3I0 505 aaKnown RBP20.85■□□□□ 0.93
RPL28-204ENST00000431533 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
RPL28-204ENST00000431533 ATG3Q9NT62 314 aa20.84■□□□□ 0.93
RPL28-204ENST00000431533 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
RPL28-204ENST00000431533 ITPK1Q13572 414 aa20.83■□□□□ 0.93
RPL28-204ENST00000431533 AMOTQ4VCS5 1084 aa20.83■□□□□ 0.93
RPL28-204ENST00000431533 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
RPL28-204ENST00000431533 DCAF5Q96JK2 942 aa20.83■□□□□ 0.93
RPL28-204ENST00000431533 ADRA2BP18089 450 aa20.82■□□□□ 0.92
RPL28-204ENST00000431533 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
RPL28-204ENST00000431533 MMP10P09238 476 aa20.8■□□□□ 0.92
RPL28-204ENST00000431533 TGFB2P61812 414 aa20.8■□□□□ 0.92
RPL28-204ENST00000431533 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
RPL28-204ENST00000431533 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
RPL28-204ENST00000431533 CABP4P57796 275 aa20.79■□□□□ 0.92
RPL28-204ENST00000431533 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
RPL28-204ENST00000431533 ADCY9O60503 1353 aa20.79■□□□□ 0.92
RPL28-204ENST00000431533 RFC4P35249 363 aa20.78■□□□□ 0.92
RPL28-204ENST00000431533 ZNF526Q8TF50 670 aaPredicted RBP20.78■□□□□ 0.92
RPL28-204ENST00000431533 CCDC87Q9NVE4 849 aa20.78■□□□□ 0.92
RPL28-204ENST00000431533 MTHFSP49914 203 aa20.77■□□□□ 0.92
RPL28-204ENST00000431533 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
RPL28-204ENST00000431533 HSPA6P17066 643 aa20.76■□□□□ 0.91
RPL28-204ENST00000431533 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
RPL28-204ENST00000431533 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
RPL28-204ENST00000431533 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
RPL28-204ENST00000431533 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
RPL28-204ENST00000431533 KDRP35968 1356 aa20.75■□□□□ 0.91
RPL28-204ENST00000431533 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
RPL28-204ENST00000431533 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
RPL28-204ENST00000431533 AEBP1Q8IUX7 1158 aa20.75■□□□□ 0.91
RPL28-204ENST00000431533 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
RPL28-204ENST00000431533 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
RPL28-204ENST00000431533 ARHGEF1Q92888 912 aaKnown RBP20.74■□□□□ 0.91
RPL28-204ENST00000431533 IL13P35225 146 aa20.73■□□□□ 0.91
RPL28-204ENST00000431533 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
RPL28-204ENST00000431533 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
RPL28-204ENST00000431533 PXDNLA1KZ92 1463 aa20.7■□□□□ 0.9
RPL28-204ENST00000431533 GYS1P13807 737 aa20.7■□□□□ 0.9
RPL28-204ENST00000431533 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
RPL28-204ENST00000431533 CICQ96RK0 1608 aaPredicted RBP20.7■□□□□ 0.9
RPL28-204ENST00000431533 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
RPL28-204ENST00000431533 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
RPL28-204ENST00000431533 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
RPL28-204ENST00000431533 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
RPL28-204ENST00000431533 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
RPL28-204ENST00000431533 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
RPL28-204ENST00000431533 FCHSD2O94868 740 aa20.68■□□□□ 0.9
RPL28-204ENST00000431533 HMOX1P09601 288 aa20.68■□□□□ 0.9
RPL28-204ENST00000431533 IFFO2Q5TF58 517 aa20.68■□□□□ 0.9
RPL28-204ENST00000431533 NFATC2IPQ8NCF5 419 aa20.68■□□□□ 0.9
RPL28-204ENST00000431533 DPEP1P16444 411 aa20.67■□□□□ 0.9
RPL28-204ENST00000431533 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
RPL28-204ENST00000431533 KIF3CO14782 793 aa20.66■□□□□ 0.9
RPL28-204ENST00000431533 PIM2Q9P1W9 311 aa20.66■□□□□ 0.9
RPL28-204ENST00000431533 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
RPL28-204ENST00000431533 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
RPL28-204ENST00000431533 TOMM70O94826 608 aa20.65■□□□□ 0.9
RPL28-204ENST00000431533 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
RPL28-204ENST00000431533 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
RPL28-204ENST00000431533 APLP1P51693 650 aa20.64■□□□□ 0.89
RPL28-204ENST00000431533 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.89
RPL28-204ENST00000431533 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
RPL28-204ENST00000431533 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
RPL28-204ENST00000431533 ZPR1O75312 459 aa20.62■□□□□ 0.89
RPL28-204ENST00000431533 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
RPL28-204ENST00000431533 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
RPL28-204ENST00000431533 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
RPL28-204ENST00000431533 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
RPL28-204ENST00000431533 MYH14Q7Z406 1995 aaKnown RBP20.6■□□□□ 0.89
RPL28-204ENST00000431533 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
RPL28-204ENST00000431533 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
RPL28-204ENST00000431533 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
RPL28-204ENST00000431533 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
RPL28-204ENST00000431533 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
RPL28-204ENST00000431533 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
RPL28-204ENST00000431533 FKBP8Q14318 412 aa20.58■□□□□ 0.89
RPL28-204ENST00000431533 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
RPL28-204ENST00000431533 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
RPL28-204ENST00000431533 KCNA3P22001 575 aa20.57■□□□□ 0.88
RPL28-204ENST00000431533 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
RPL28-204ENST00000431533 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
RPL28-204ENST00000431533 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
RPL28-204ENST00000431533 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
RPL28-204ENST00000431533 RBM46Q8TBY0 533 aaKnown RBP20.55■□□□□ 0.88
RPL28-204ENST00000431533 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
RPL28-204ENST00000431533 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
RPL28-204ENST00000431533 TM4SF1P30408 202 aa20.54■□□□□ 0.88
RPL28-204ENST00000431533 DDR1Q08345 913 aa20.54■□□□□ 0.88
RPL28-204ENST00000431533 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms