RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CPDO75976 1380 aa27.37■■□□□ 1.97
CNEP1R1-202ENST00000427478 BTBD11A6QL63 1104 aa27.37■■□□□ 1.97
CNEP1R1-202ENST00000427478 NUCB1Q02818 461 aa27.37■■□□□ 1.97
CNEP1R1-202ENST00000427478 RAPGEF4Q8WZA2 1011 aa27.37■■□□□ 1.97
CNEP1R1-202ENST00000427478 ADAMTS7Q9UKP4 1686 aa27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 EIF4A1P60842 406 aaKnown RBP27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 FLIIQ13045 1269 aa27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 SLC4A10Q6U841 1118 aa27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 NOP58Q9Y2X3 529 aaKnown RBP27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
CNEP1R1-202ENST00000427478 HDGFL1Q5TGJ6 251 aa27.35■■□□□ 1.97
CNEP1R1-202ENST00000427478 MEGF6O75095 1541 aa27.35■■□□□ 1.97
CNEP1R1-202ENST00000427478 KCNQ3O43525 872 aa27.35■■□□□ 1.97
CNEP1R1-202ENST00000427478 GCC1Q96CN9 775 aa27.35■■□□□ 1.97
CNEP1R1-202ENST00000427478 FKBP5Q13451 457 aaPredicted RBP27.34■■□□□ 1.97
CNEP1R1-202ENST00000427478 MEIS3Q99687 375 aa27.34■■□□□ 1.97
CNEP1R1-202ENST00000427478 ABCA3Q99758 1704 aa27.34■■□□□ 1.97
CNEP1R1-202ENST00000427478 ATP10DQ9P241 1426 aa27.33■■□□□ 1.97
CNEP1R1-202ENST00000427478 LNPKQ9C0E8 428 aa27.33■■□□□ 1.97
CNEP1R1-202ENST00000427478 N4BP2Q86UW6 1770 aaPredicted RBP27.33■■□□□ 1.97
CNEP1R1-202ENST00000427478 CHD1LQ86WJ1 897 aa27.32■■□□□ 1.96
CNEP1R1-202ENST00000427478 SCN11AQ9UI33 1791 aa27.32■■□□□ 1.96
CNEP1R1-202ENST00000427478 TATP17735 454 aaPredicted RBP27.32■■□□□ 1.96
CNEP1R1-202ENST00000427478 CCT4P50991 539 aaKnown RBP27.32■■□□□ 1.96
CNEP1R1-202ENST00000427478 NHSL1Q5SYE7 1610 aa27.31■■□□□ 1.96
CNEP1R1-202ENST00000427478 ZBTB47Q9UFB7 747 aaPredicted RBP27.31■■□□□ 1.96
CNEP1R1-202ENST00000427478 EIF2S2P20042 333 aaKnown RBP27.3■■□□□ 1.96
CNEP1R1-202ENST00000427478 ANKRD45Q5TZF3 282 aa27.3■■□□□ 1.96
CNEP1R1-202ENST00000427478 PKD1L3Q7Z443 1732 aa27.28■■□□□ 1.96
CNEP1R1-202ENST00000427478 HOXB7P09629 217 aa27.28■■□□□ 1.96
CNEP1R1-202ENST00000427478 ANP32EQ9BTT0 268 aa27.28■■□□□ 1.96
CNEP1R1-202ENST00000427478 SEC24BO95487 1268 aa27.28■■□□□ 1.96
CNEP1R1-202ENST00000427478 ANKRD44Q8N8A2 993 aa27.28■■□□□ 1.96
CNEP1R1-202ENST00000427478 CEP85Q6P2H3 762 aa27.27■■□□□ 1.96
CNEP1R1-202ENST00000427478 PRDM11Q9NQV5 511 aa27.27■■□□□ 1.96
CNEP1R1-202ENST00000427478 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
CNEP1R1-202ENST00000427478 PHAXQ9H814 394 aaKnown RBP27.26■■□□□ 1.95
CNEP1R1-202ENST00000427478 KDM6AO15550 1401 aaPredicted RBP27.26■■□□□ 1.95
CNEP1R1-202ENST00000427478 RPAP2Q8IXW5 612 aaPredicted RBP27.25■■□□□ 1.95
CNEP1R1-202ENST00000427478 PXDNLA1KZ92 1463 aa27.25■■□□□ 1.95
CNEP1R1-202ENST00000427478 PHKG2P15735 406 aa27.25■■□□□ 1.95
CNEP1R1-202ENST00000427478 CHPF2Q9P2E5 772 aa27.25■■□□□ 1.95
CNEP1R1-202ENST00000427478 DDRGK1Q96HY6 314 aa27.24■■□□□ 1.95
CNEP1R1-202ENST00000427478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.23■■□□□ 1.957e-6■■□□□ 12.8
CNEP1R1-202ENST00000427478 DCTPP1Q9H773 170 aa27.22■■□□□ 1.95
CNEP1R1-202ENST00000427478 PARP4Q9UKK3 1724 aaKnown RBP27.22■■□□□ 1.95
CNEP1R1-202ENST00000427478 IFNL2Q8IZJ0 200 aa27.21■■□□□ 1.95
CNEP1R1-202ENST00000427478 CHMP4AQ9BY43 222 aa27.21■■□□□ 1.95
CNEP1R1-202ENST00000427478 PLEKHG2Q9H7P9 1386 aa27.21■■□□□ 1.95
CNEP1R1-202ENST00000427478 COL5A2P05997 1499 aaPredicted RBP27.2■■□□□ 1.94
CNEP1R1-202ENST00000427478 WDR17Q8IZU2 1322 aa27.19■■□□□ 1.94
CNEP1R1-202ENST00000427478 HEG1Q9ULI3 1381 aa27.19■■□□□ 1.94
CNEP1R1-202ENST00000427478 GIGYF1O75420 1035 aaPredicted RBP27.19■■□□□ 1.94
CNEP1R1-202ENST00000427478 SLC52A2Q9HAB3 445 aa27.19■■□□□ 1.94
CNEP1R1-202ENST00000427478 ANXA1P04083 346 aa27.18■■□□□ 1.94
CNEP1R1-202ENST00000427478 GNAI2P04899 355 aa27.17■■□□□ 1.94
CNEP1R1-202ENST00000427478 C5P01031 1676 aa27.17■■□□□ 1.94
CNEP1R1-202ENST00000427478 PRAMEF22A3QJZ6 481 aa27.17■■□□□ 1.94
CNEP1R1-202ENST00000427478 CYP27B1O15528 508 aa27.17■■□□□ 1.94
CNEP1R1-202ENST00000427478 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
CNEP1R1-202ENST00000427478 MRC1P22897 1456 aa27.16■■□□□ 1.94
CNEP1R1-202ENST00000427478 GNAI3P08754 354 aa27.16■■□□□ 1.94
CNEP1R1-202ENST00000427478 SLC39A6Q13433 755 aa27.15■■□□□ 1.94
CNEP1R1-202ENST00000427478 NFATC2IPQ8NCF5 419 aa27.15■■□□□ 1.94
CNEP1R1-202ENST00000427478 DBF4Q9UBU7 674 aaPredicted RBP27.15■■□□□ 1.94
CNEP1R1-202ENST00000427478 HMMRO75330 724 aa27.14■■□□□ 1.93
CNEP1R1-202ENST00000427478 ZNF790Q6PG37 636 aa27.14■■□□□ 1.93
CNEP1R1-202ENST00000427478 UPF2Q9HAU5 1272 aaKnown RBP27.14■■□□□ 1.93
CNEP1R1-202ENST00000427478 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
CNEP1R1-202ENST00000427478 BCL11AQ9H165 835 aa27.13■■□□□ 1.93
CNEP1R1-202ENST00000427478 ROBO1Q9Y6N7 1651 aa27.12■■□□□ 1.93
CNEP1R1-202ENST00000427478 BMP2KLQ5H9B9 411 aa27.11■■□□□ 1.93
CNEP1R1-202ENST00000427478 PI4KAP2A4QPH2 592 aa27.11■■□□□ 1.93
CNEP1R1-202ENST00000427478 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
CNEP1R1-202ENST00000427478 PI4KAP1Q8N8J0 262 aa27.11■■□□□ 1.93
CNEP1R1-202ENST00000427478 SRCIN1Q9C0H9 1055 aa27.11■■□□□ 1.93
CNEP1R1-202ENST00000427478 APBB1O00213 710 aa27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 HSP90AB1P08238 724 aaKnown RBP27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 DNAAF4Q8WXU2 420 aa27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 USP44Q9H0E7 712 aa27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 STRN4Q9NRL3 753 aa27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 ADCY9O60503 1353 aa27.1■■□□□ 1.93
CNEP1R1-202ENST00000427478 LRRFIP2Q9Y608 721 aaKnown RBP27.09■■□□□ 1.93
CNEP1R1-202ENST00000427478 UBTFL1P0CB47 393 aaPredicted RBP27.08■■□□□ 1.93
CNEP1R1-202ENST00000427478 SHANK3Q9BYB0 1731 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 SMARCA5O60264 1052 aaPredicted RBP27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 TBC1D32Q96NH3 1257 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 PCDH11XQ9BZA7 1347 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 PCDH11YQ9BZA8 1340 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 MFAP1P55081 439 aaKnown RBP27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 BEND3Q5T5X7 828 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 LARP1Q6PKG0 1096 aaKnown RBP27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 PLEKHM2Q8IWE5 1019 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 C16orf71Q8IYS4 520 aaPredicted RBP27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 CARD10Q9BWT7 1032 aa27.07■■□□□ 1.92
CNEP1R1-202ENST00000427478 SLC4A3P48751 1232 aa27.06■■□□□ 1.92
CNEP1R1-202ENST00000427478 ZCRB1Q8TBF4 217 aaKnown RBP27.06■■□□□ 1.92
CNEP1R1-202ENST00000427478 PNMA6EA0A0J9YXQ4 647 aa27.05■■□□□ 1.92
CNEP1R1-202ENST00000427478 CABP4P57796 275 aa27.05■■□□□ 1.92
CNEP1R1-202ENST00000427478 EVA1CP58658 441 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms