RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
NELFE-203ENST00000426722 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
NELFE-203ENST00000426722 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
NELFE-203ENST00000426722 ITPK1Q13572 414 aa17.65■□□□□ 0.42
NELFE-203ENST00000426722 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
NELFE-203ENST00000426722 GNPATO15228 680 aa17.64■□□□□ 0.41
NELFE-203ENST00000426722 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
NELFE-203ENST00000426722 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
NELFE-203ENST00000426722 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
NELFE-203ENST00000426722 KDRP35968 1356 aa17.63■□□□□ 0.41
NELFE-203ENST00000426722 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
NELFE-203ENST00000426722 ADRA2BP18089 450 aa17.61■□□□□ 0.41
NELFE-203ENST00000426722 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
NELFE-203ENST00000426722 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
NELFE-203ENST00000426722 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
NELFE-203ENST00000426722 CABP4P57796 275 aa17.6■□□□□ 0.41
NELFE-203ENST00000426722 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
NELFE-203ENST00000426722 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
NELFE-203ENST00000426722 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
NELFE-203ENST00000426722 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
NELFE-203ENST00000426722 KIF13BQ9NQT8 1826 aa17.6■□□□□ 0.41
NELFE-203ENST00000426722 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
NELFE-203ENST00000426722 MTHFSP49914 203 aa17.59■□□□□ 0.41
NELFE-203ENST00000426722 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
NELFE-203ENST00000426722 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
NELFE-203ENST00000426722 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.41
NELFE-203ENST00000426722 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
NELFE-203ENST00000426722 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
NELFE-203ENST00000426722 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
NELFE-203ENST00000426722 MMP10P09238 476 aa17.57■□□□□ 0.4
NELFE-203ENST00000426722 TGFB2P61812 414 aa17.57■□□□□ 0.4
NELFE-203ENST00000426722 IL13P35225 146 aa17.56■□□□□ 0.4
NELFE-203ENST00000426722 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
NELFE-203ENST00000426722 ARHGEF1Q92888 912 aaKnown RBP17.56■□□□□ 0.4
NELFE-203ENST00000426722 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
NELFE-203ENST00000426722 ADCY9O60503 1353 aa17.55■□□□□ 0.4
NELFE-203ENST00000426722 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
NELFE-203ENST00000426722 RFC4P35249 363 aa17.55■□□□□ 0.4
NELFE-203ENST00000426722 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
NELFE-203ENST00000426722 GPBP1L1Q9HC44 474 aaPredicted RBP17.55■□□□□ 0.4
NELFE-203ENST00000426722 NFATC2IPQ8NCF5 419 aa17.54■□□□□ 0.4
NELFE-203ENST00000426722 CCDC87Q9NVE4 849 aa17.54■□□□□ 0.4
NELFE-203ENST00000426722 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
NELFE-203ENST00000426722 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
NELFE-203ENST00000426722 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
NELFE-203ENST00000426722 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
NELFE-203ENST00000426722 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.4
NELFE-203ENST00000426722 GYS1P13807 737 aa17.52■□□□□ 0.4
NELFE-203ENST00000426722 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
NELFE-203ENST00000426722 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
NELFE-203ENST00000426722 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
NELFE-203ENST00000426722 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
NELFE-203ENST00000426722 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
NELFE-203ENST00000426722 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
NELFE-203ENST00000426722 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
NELFE-203ENST00000426722 GOLGB1Q14789 3259 aaKnown RBP17.49■□□□□ 0.39
NELFE-203ENST00000426722 TJP1Q07157 1748 aa17.49■□□□□ 0.39
NELFE-203ENST00000426722 KIF7Q2M1P5 1343 aa17.48■□□□□ 0.39
NELFE-203ENST00000426722 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
NELFE-203ENST00000426722 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
NELFE-203ENST00000426722 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
NELFE-203ENST00000426722 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
NELFE-203ENST00000426722 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
NELFE-203ENST00000426722 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
NELFE-203ENST00000426722 A0A0G2JLW4 131 aa17.46■□□□□ 0.39
NELFE-203ENST00000426722 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.39
NELFE-203ENST00000426722 MRC1P22897 1456 aa17.45■□□□□ 0.38
NELFE-203ENST00000426722 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
NELFE-203ENST00000426722 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
NELFE-203ENST00000426722 DPEP1P16444 411 aa17.45■□□□□ 0.38
NELFE-203ENST00000426722 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
NELFE-203ENST00000426722 FCHSD2O94868 740 aa17.44■□□□□ 0.38
NELFE-203ENST00000426722 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
NELFE-203ENST00000426722 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
NELFE-203ENST00000426722 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
NELFE-203ENST00000426722 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 ZPR1O75312 459 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 HMOX1P09601 288 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 HSPA6P17066 643 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 FKBP8Q14318 412 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 ARHGAP27Q6ZUM4 889 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
NELFE-203ENST00000426722 TM4SF1P30408 202 aa17.42■□□□□ 0.38
NELFE-203ENST00000426722 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
NELFE-203ENST00000426722 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
NELFE-203ENST00000426722 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
NELFE-203ENST00000426722 KIF3CO14782 793 aa17.41■□□□□ 0.38
NELFE-203ENST00000426722 KCNA3P22001 575 aa17.41■□□□□ 0.38
NELFE-203ENST00000426722 SOS1Q07889 1333 aaPredicted RBP17.41■□□□□ 0.38
NELFE-203ENST00000426722 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
NELFE-203ENST00000426722 CC2D1BQ5T0F9 858 aaKnown RBP17.4■□□□□ 0.38
NELFE-203ENST00000426722 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
NELFE-203ENST00000426722 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
NELFE-203ENST00000426722 DDR1Q08345 913 aa17.39■□□□□ 0.37
NELFE-203ENST00000426722 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
NELFE-203ENST00000426722 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
NELFE-203ENST00000426722 NARFQ9UHQ1 456 aa17.39■□□□□ 0.37
NELFE-203ENST00000426722 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
NELFE-203ENST00000426722 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms