RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 SPC24Q8NBT2 197 aa16.38■□□□□ 0.21
LRCH3-203ENST00000425562 ERC2O15083 957 aa16.38■□□□□ 0.21
LRCH3-203ENST00000425562 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
LRCH3-203ENST00000425562 REC8O95072 547 aa16.37■□□□□ 0.21
LRCH3-203ENST00000425562 MAP7D2Q96T17 732 aa16.37■□□□□ 0.21
LRCH3-203ENST00000425562 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
LRCH3-203ENST00000425562 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
LRCH3-203ENST00000425562 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
LRCH3-203ENST00000425562 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
LRCH3-203ENST00000425562 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
LRCH3-203ENST00000425562 EDC4Q6P2E9 1401 aaKnown RBP16.37■□□□□ 0.21
LRCH3-203ENST00000425562 ZNF710Q8N1W2 664 aa16.36■□□□□ 0.21
LRCH3-203ENST00000425562 PPP4R3BQ5MIZ7 849 aa16.36■□□□□ 0.21
LRCH3-203ENST00000425562 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
LRCH3-203ENST00000425562 ATP7BP35670 1465 aa16.36■□□□□ 0.21
LRCH3-203ENST00000425562 ADCY5O95622 1261 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 PTCH1Q13635 1447 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
LRCH3-203ENST00000425562 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
LRCH3-203ENST00000425562 FIBPO43427 364 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 TERF1P54274 439 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
LRCH3-203ENST00000425562 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
LRCH3-203ENST00000425562 MSH6P52701 1360 aa16.34■□□□□ 0.21
LRCH3-203ENST00000425562 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
LRCH3-203ENST00000425562 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
LRCH3-203ENST00000425562 ACEP12821 1306 aa16.34■□□□□ 0.21
LRCH3-203ENST00000425562 SLC4A2P04920 1241 aa16.33■□□□□ 0.21
LRCH3-203ENST00000425562 G2E3Q7L622 706 aa16.33■□□□□ 0.21
LRCH3-203ENST00000425562 MBD3O95983 291 aa16.33■□□□□ 0.2
LRCH3-203ENST00000425562 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-203ENST00000425562 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
LRCH3-203ENST00000425562 CCDC94Q9BW85 323 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-203ENST00000425562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
LRCH3-203ENST00000425562 CPA1P15085 419 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
LRCH3-203ENST00000425562 BRD1O95696 1058 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 PDE1AP54750 535 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 IL25Q9H293 177 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 IL1RAPL2Q9NP60 686 aa16.32■□□□□ 0.2
LRCH3-203ENST00000425562 ROBO2Q9HCK4 1378 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 RIMBP3CA6NJZ7 1639 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 RIMBP3BA6NNM3 1639 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 RIMBP3Q9UFD9 1639 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 MYRIPQ8NFW9 859 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-203ENST00000425562 SMAP1Q8IYB5 467 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-203ENST00000425562 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
LRCH3-203ENST00000425562 KNDC1Q76NI1 1749 aa16.3■□□□□ 0.2
LRCH3-203ENST00000425562 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-203ENST00000425562 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
LRCH3-203ENST00000425562 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-203ENST00000425562 U2AF2P26368 475 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■□ 23.5
LRCH3-203ENST00000425562 MCM5P33992 734 aa16.29■□□□□ 0.2
LRCH3-203ENST00000425562 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
LRCH3-203ENST00000425562 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
LRCH3-203ENST00000425562 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
LRCH3-203ENST00000425562 PYCARDQ9ULZ3 195 aa16.28■□□□□ 0.2
LRCH3-203ENST00000425562 LTKP29376 864 aa16.28■□□□□ 0.2
LRCH3-203ENST00000425562 SYAP1Q96A49 352 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-203ENST00000425562 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
LRCH3-203ENST00000425562 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
LRCH3-203ENST00000425562 KIF3AQ9Y496 699 aa16.27■□□□□ 0.2
LRCH3-203ENST00000425562 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
LRCH3-203ENST00000425562 CHL1O00533 1208 aa16.27■□□□□ 0.19
LRCH3-203ENST00000425562 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.19
LRCH3-203ENST00000425562 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.19
LRCH3-203ENST00000425562 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.19
LRCH3-203ENST00000425562 AP5Z1O43299 807 aa16.26■□□□□ 0.19
LRCH3-203ENST00000425562 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-203ENST00000425562 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
LRCH3-203ENST00000425562 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
LRCH3-203ENST00000425562 NRXN3Q9Y4C0 1643 aa16.26■□□□□ 0.19
LRCH3-203ENST00000425562 ATP10DQ9P241 1426 aa16.26■□□□□ 0.19
LRCH3-203ENST00000425562 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
LRCH3-203ENST00000425562 CAMK4Q16566 473 aa16.26■□□□□ 0.19
LRCH3-203ENST00000425562 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
LRCH3-203ENST00000425562 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
LRCH3-203ENST00000425562 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
LRCH3-203ENST00000425562 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
LRCH3-203ENST00000425562 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
LRCH3-203ENST00000425562 MCCP23508 829 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 DMTNQ08495 405 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 TCHHQ07283 1943 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 RGS12O14924 1447 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 AMPHP49418 695 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 FAM173BQ6P4H8 233 aa16.24■□□□□ 0.19
LRCH3-203ENST00000425562 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
LRCH3-203ENST00000425562 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
LRCH3-203ENST00000425562 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
LRCH3-203ENST00000425562 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
LRCH3-203ENST00000425562 MX1P20591 662 aa16.23■□□□□ 0.19
LRCH3-203ENST00000425562 FERMT3Q86UX7 667 aa16.23■□□□□ 0.19
LRCH3-203ENST00000425562 RBM33Q96EV2 1170 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms