RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 C1orf141Q5JVX7 400 aa28.67■■■□□ 2.18
SMIM12-202ENST00000423898 LINC00116Q8NCU8 138 aa28.67■■■□□ 2.18
SMIM12-202ENST00000423898 ATG3Q9NT62 314 aa28.67■■■□□ 2.18
SMIM12-202ENST00000423898 KDM6AO15550 1401 aaPredicted RBP28.67■■■□□ 2.18
SMIM12-202ENST00000423898 KDRP35968 1356 aa28.66■■■□□ 2.18
SMIM12-202ENST00000423898 ATP6V1AP38606 617 aa28.66■■■□□ 2.18
SMIM12-202ENST00000423898 AMIGO3Q86WK7 504 aa28.65■■■□□ 2.18
SMIM12-202ENST00000423898 ITPK1Q13572 414 aa28.64■■■□□ 2.18
SMIM12-202ENST00000423898 SMIM5Q71RC9 77 aa28.64■■■□□ 2.18
SMIM12-202ENST00000423898 CABP4P57796 275 aa28.63■■■□□ 2.17
SMIM12-202ENST00000423898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.62■■■□□ 2.17
SMIM12-202ENST00000423898 RBM42Q9BTD8 480 aaKnown RBP28.61■■■□□ 2.17
SMIM12-202ENST00000423898 CHD4Q14839 1912 aa28.61■■■□□ 2.17
SMIM12-202ENST00000423898 GNPATO15228 680 aa28.6■■■□□ 2.17
SMIM12-202ENST00000423898 GPR162Q16538 588 aa28.6■■■□□ 2.17
SMIM12-202ENST00000423898 NLGN2Q8NFZ4 835 aa28.6■■■□□ 2.17
SMIM12-202ENST00000423898 SCN11AQ9UI33 1791 aa28.6■■■□□ 2.17
SMIM12-202ENST00000423898 GOLGB1Q14789 3259 aaKnown RBP28.59■■■□□ 2.17
SMIM12-202ENST00000423898 HMOX1P09601 288 aa28.59■■■□□ 2.17
SMIM12-202ENST00000423898 SSFA2P28290 1259 aa28.59■■■□□ 2.17
SMIM12-202ENST00000423898 PELP1Q8IZL8 1130 aaKnown RBP28.59■■■□□ 2.17
SMIM12-202ENST00000423898 ZNF831Q5JPB2 1677 aa28.58■■■□□ 2.17
SMIM12-202ENST00000423898 NPC1L1Q9UHC9 1359 aa28.58■■■□□ 2.17
SMIM12-202ENST00000423898 DIAPH1O60610 1272 aaKnown RBP28.57■■■□□ 2.16
SMIM12-202ENST00000423898 COL5A3P25940 1745 aaPredicted RBP28.57■■■□□ 2.16
SMIM12-202ENST00000423898 VIRMAQ69YN4 1812 aaKnown RBP28.56■■■□□ 2.16
SMIM12-202ENST00000423898 SLC4A9Q96Q91 983 aa28.55■■■□□ 2.16
SMIM12-202ENST00000423898 NFATC2IPQ8NCF5 419 aa28.54■■■□□ 2.16
SMIM12-202ENST00000423898 AKAP4Q5JQC9 854 aa28.53■■■□□ 2.16
SMIM12-202ENST00000423898 PTCD1O75127 700 aaKnown RBP28.51■■■□□ 2.15
SMIM12-202ENST00000423898 COL3A1P02461 1466 aaPredicted RBP28.51■■■□□ 2.15
SMIM12-202ENST00000423898 RTCBQ9Y3I0 505 aaKnown RBP28.5■■■□□ 2.15
SMIM12-202ENST00000423898 CD2APQ9Y5K6 639 aa28.48■■■□□ 2.15
SMIM12-202ENST00000423898 U2SURPO15042 1029 aaKnown RBP28.47■■■□□ 2.15
SMIM12-202ENST00000423898 LGR6Q9HBX8 967 aa28.47■■■□□ 2.15
SMIM12-202ENST00000423898 MYH14Q7Z406 1995 aaKnown RBP28.47■■■□□ 2.15
SMIM12-202ENST00000423898 TJP1Q07157 1748 aa28.46■■■□□ 2.15
SMIM12-202ENST00000423898 CNTNAP4Q9C0A0 1308 aa28.46■■■□□ 2.15
SMIM12-202ENST00000423898 MTHFSDQ2M296 383 aaKnown RBP28.46■■■□□ 2.15
SMIM12-202ENST00000423898 TRAPPC3LQ5T215 181 aa28.46■■■□□ 2.15
SMIM12-202ENST00000423898 RC3H1Q5TC82 1133 aaKnown RBP28.46■■■□□ 2.15
SMIM12-202ENST00000423898 SLC52A2Q9HAB3 445 aa28.45■■■□□ 2.14
SMIM12-202ENST00000423898 RNMTO43148 476 aaKnown RBP28.44■■■□□ 2.14
SMIM12-202ENST00000423898 MRC1P22897 1456 aa28.44■■■□□ 2.14
SMIM12-202ENST00000423898 C4AP0C0L4 1744 aa28.43■■■□□ 2.14
SMIM12-202ENST00000423898 YBX3P16989 372 aaKnown RBP eCLIP28.43■■■□□ 2.147e-8■■■■■ 29
SMIM12-202ENST00000423898 ZNF784Q8NCA9 323 aaPredicted RBP28.43■■■□□ 2.14
SMIM12-202ENST00000423898 CICQ96RK0 1608 aaPredicted RBP28.43■■■□□ 2.14
SMIM12-202ENST00000423898 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
SMIM12-202ENST00000423898 RPS6KA4O75676 772 aa28.41■■■□□ 2.14
SMIM12-202ENST00000423898 ADRA2BP18089 450 aa28.41■■■□□ 2.14
SMIM12-202ENST00000423898 ARHGEF1Q92888 912 aaKnown RBP28.41■■■□□ 2.14
SMIM12-202ENST00000423898 MMP10P09238 476 aa28.4■■■□□ 2.14
SMIM12-202ENST00000423898 RFC4P35249 363 aa28.4■■■□□ 2.14
SMIM12-202ENST00000423898 CRKLP46109 303 aaKnown RBP28.4■■■□□ 2.14
SMIM12-202ENST00000423898 CFAP53Q96M91 514 aa28.4■■■□□ 2.14
SMIM12-202ENST00000423898 GRIN3BO60391 1043 aa28.38■■■□□ 2.13
SMIM12-202ENST00000423898 SLC39A6Q13433 755 aa28.38■■■□□ 2.13
SMIM12-202ENST00000423898 NLGN1Q8N2Q7 840 aa28.36■■■□□ 2.13
SMIM12-202ENST00000423898 WWC3Q9ULE0 1092 aa28.35■■■□□ 2.13
SMIM12-202ENST00000423898 KCPQ6ZWJ8 1503 aa28.34■■■□□ 2.13
SMIM12-202ENST00000423898 GYS1P13807 737 aa28.34■■■□□ 2.13
SMIM12-202ENST00000423898 DNAJC10Q8IXB1 793 aa28.34■■■□□ 2.13
SMIM12-202ENST00000423898 GAS2L2Q8NHY3 880 aa28.34■■■□□ 2.13
SMIM12-202ENST00000423898 KIF13BQ9NQT8 1826 aa28.33■■■□□ 2.13
SMIM12-202ENST00000423898 UBR2Q8IWV8 1755 aa28.32■■■□□ 2.12
SMIM12-202ENST00000423898 PPP2R1AP30153 589 aa28.32■■■□□ 2.12
SMIM12-202ENST00000423898 GNAT3A8MTJ3 354 aa28.31■■■□□ 2.12
SMIM12-202ENST00000423898 INTS5Q6P9B9 1019 aaKnown RBP28.31■■■□□ 2.12
SMIM12-202ENST00000423898 SRP68Q9UHB9 627 aaKnown RBP28.31■■■□□ 2.12
SMIM12-202ENST00000423898 NUDCQ9Y266 331 aa28.31■■■□□ 2.12
SMIM12-202ENST00000423898 PRKAR2BP31323 418 aa28.3■■■□□ 2.12
SMIM12-202ENST00000423898 CCDC87Q9NVE4 849 aa28.3■■■□□ 2.12
SMIM12-202ENST00000423898 N4BP2Q86UW6 1770 aaPredicted RBP28.29■■■□□ 2.12
SMIM12-202ENST00000423898 PARP3Q9Y6F1 533 aa28.29■■■□□ 2.12
SMIM12-202ENST00000423898 SIPA1L3O60292 1781 aaPredicted RBP28.29■■■□□ 2.12
SMIM12-202ENST00000423898 USP42Q9H9J4 1324 aaKnown RBP28.28■■■□□ 2.12
SMIM12-202ENST00000423898 TEFQ10587 303 aa28.28■■■□□ 2.12
SMIM12-202ENST00000423898 TTC5Q8N0Z6 440 aa28.28■■■□□ 2.12
SMIM12-202ENST00000423898 RSPH6AQ9H0K4 717 aa28.28■■■□□ 2.12
SMIM12-202ENST00000423898 KIAA1551Q9HCM1 1747 aa28.27■■■□□ 2.12
SMIM12-202ENST00000423898 CYP19A1P11511 503 aaPredicted RBP28.27■■■□□ 2.12
SMIM12-202ENST00000423898 C10orf71Q711Q0 1435 aa28.26■■■□□ 2.12
SMIM12-202ENST00000423898 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
SMIM12-202ENST00000423898 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.11
SMIM12-202ENST00000423898 IL17REQ8NFR9 667 aa28.26■■■□□ 2.11
SMIM12-202ENST00000423898 PHACTR3Q96KR7 559 aa28.26■■■□□ 2.11
SMIM12-202ENST00000423898 PXDNLA1KZ92 1463 aa28.26■■■□□ 2.11
SMIM12-202ENST00000423898 SOS1Q07889 1333 aaPredicted RBP28.24■■■□□ 2.11
SMIM12-202ENST00000423898 FKBP8Q14318 412 aa28.24■■■□□ 2.11
SMIM12-202ENST00000423898 VSIG10Q8N0Z9 540 aa28.24■■■□□ 2.11
SMIM12-202ENST00000423898 ZPR1O75312 459 aa28.23■■■□□ 2.11
SMIM12-202ENST00000423898 ZBTB1Q9Y2K1 713 aa28.23■■■□□ 2.11
SMIM12-202ENST00000423898 TGFB2P61812 414 aa28.22■■■□□ 2.11
SMIM12-202ENST00000423898 COL15A1P39059 1388 aa28.22■■■□□ 2.11
SMIM12-202ENST00000423898 A0A0G2JLW4 131 aa28.2■■■□□ 2.1
SMIM12-202ENST00000423898 USPL1Q5W0Q7 1092 aa28.2■■■□□ 2.1
SMIM12-202ENST00000423898 ZNF790Q6PG37 636 aa28.2■■■□□ 2.1
SMIM12-202ENST00000423898 ZNF496Q96IT1 587 aaPredicted RBP28.19■■■□□ 2.1
SMIM12-202ENST00000423898 CEMIPQ8WUJ3 1361 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms