RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
COL18A1-205ENST00000423214 CD2APQ9Y5K6 639 aa22.11■■□□□ 1.13
COL18A1-205ENST00000423214 GNPATO15228 680 aa22.1■■□□□ 1.13
COL18A1-205ENST00000423214 HSP90AB1P08238 724 aaKnown RBP22.1■■□□□ 1.13
COL18A1-205ENST00000423214 YBX3P16989 372 aaKnown RBP eCLIP22.1■■□□□ 1.134e-6■□□□□ 11.2
COL18A1-205ENST00000423214 AMIGO3Q86WK7 504 aa22.1■■□□□ 1.13
COL18A1-205ENST00000423214 KDRP35968 1356 aa22.09■■□□□ 1.13
COL18A1-205ENST00000423214 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
COL18A1-205ENST00000423214 ZNF530Q6P9A1 599 aaPredicted RBP22.08■■□□□ 1.13
COL18A1-205ENST00000423214 SMIM5Q71RC9 77 aa22.08■■□□□ 1.13
COL18A1-205ENST00000423214 KNSTRNQ9Y448 316 aa22.08■■□□□ 1.13
COL18A1-205ENST00000423214 KDM6AO15550 1401 aaPredicted RBP22.07■■□□□ 1.12
COL18A1-205ENST00000423214 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
COL18A1-205ENST00000423214 ITPK1Q13572 414 aa22.07■■□□□ 1.12
COL18A1-205ENST00000423214 DCAF5Q96JK2 942 aa22.07■■□□□ 1.12
COL18A1-205ENST00000423214 ATG3Q9NT62 314 aa22.07■■□□□ 1.12
COL18A1-205ENST00000423214 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
COL18A1-205ENST00000423214 CICQ96RK0 1608 aaPredicted RBP22.06■■□□□ 1.12
COL18A1-205ENST00000423214 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
COL18A1-205ENST00000423214 TJP1Q07157 1748 aa22.06■■□□□ 1.12
COL18A1-205ENST00000423214 GIGYF1O75420 1035 aaPredicted RBP22.05■■□□□ 1.12
COL18A1-205ENST00000423214 AMOTQ4VCS5 1084 aa22.05■■□□□ 1.12
COL18A1-205ENST00000423214 C1orf141Q5JVX7 400 aa22.05■■□□□ 1.12
COL18A1-205ENST00000423214 RBM42Q9BTD8 480 aaKnown RBP22.05■■□□□ 1.12
COL18A1-205ENST00000423214 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
COL18A1-205ENST00000423214 C1QTNF8P60827 252 aa22.03■■□□□ 1.12
COL18A1-205ENST00000423214 CABP4P57796 275 aa22.02■■□□□ 1.12
COL18A1-205ENST00000423214 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
COL18A1-205ENST00000423214 RTCBQ9Y3I0 505 aaKnown RBP22.02■■□□□ 1.12
COL18A1-205ENST00000423214 BRCA1P38398 1863 aaKnown RBP22.01■■□□□ 1.11
COL18A1-205ENST00000423214 SENP3-EIF4A1A0A087X0R7 540 aa22.01■■□□□ 1.11
COL18A1-205ENST00000423214 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
COL18A1-205ENST00000423214 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
COL18A1-205ENST00000423214 MTHFSP49914 203 aa21.99■■□□□ 1.11
COL18A1-205ENST00000423214 WWC3Q9ULE0 1092 aa21.99■■□□□ 1.11
COL18A1-205ENST00000423214 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
COL18A1-205ENST00000423214 MMP10P09238 476 aa21.98■■□□□ 1.11
COL18A1-205ENST00000423214 ADRA2BP18089 450 aa21.97■■□□□ 1.11
COL18A1-205ENST00000423214 TRAPPC3LQ5T215 181 aa21.97■■□□□ 1.11
COL18A1-205ENST00000423214 KIF7Q2M1P5 1343 aa21.97■■□□□ 1.11
COL18A1-205ENST00000423214 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
COL18A1-205ENST00000423214 SLC4A9Q96Q91 983 aa21.96■■□□□ 1.11
COL18A1-205ENST00000423214 ARFGEF1Q9Y6D6 1849 aa21.95■■□□□ 1.1
COL18A1-205ENST00000423214 IL13P35225 146 aa21.95■■□□□ 1.1
COL18A1-205ENST00000423214 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
COL18A1-205ENST00000423214 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
COL18A1-205ENST00000423214 MRC1P22897 1456 aa21.95■■□□□ 1.1
COL18A1-205ENST00000423214 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
COL18A1-205ENST00000423214 RFC4P35249 363 aa21.94■■□□□ 1.1
COL18A1-205ENST00000423214 ADCY9O60503 1353 aa21.94■■□□□ 1.1
COL18A1-205ENST00000423214 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
COL18A1-205ENST00000423214 NLGN1Q8N2Q7 840 aa21.93■■□□□ 1.1
COL18A1-205ENST00000423214 ADAMTS7Q9UKP4 1686 aa21.93■■□□□ 1.1
COL18A1-205ENST00000423214 UBR2Q8IWV8 1755 aa21.92■■□□□ 1.1
COL18A1-205ENST00000423214 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
COL18A1-205ENST00000423214 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
COL18A1-205ENST00000423214 ARHGEF1Q92888 912 aaKnown RBP21.92■■□□□ 1.1
COL18A1-205ENST00000423214 AKAP4Q5JQC9 854 aa21.91■■□□□ 1.1
COL18A1-205ENST00000423214 GYS1P13807 737 aa21.9■■□□□ 1.1
COL18A1-205ENST00000423214 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
COL18A1-205ENST00000423214 GPBP1L1Q9HC44 474 aaPredicted RBP21.9■■□□□ 1.1
COL18A1-205ENST00000423214 CCDC87Q9NVE4 849 aa21.9■■□□□ 1.1
COL18A1-205ENST00000423214 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
COL18A1-205ENST00000423214 AFDNP55196 1824 aaKnown RBP21.88■■□□□ 1.09
COL18A1-205ENST00000423214 HMOX1P09601 288 aa21.88■■□□□ 1.09
COL18A1-205ENST00000423214 ZNF526Q8TF50 670 aaPredicted RBP21.88■■□□□ 1.09
COL18A1-205ENST00000423214 TGFB2P61812 414 aa21.87■■□□□ 1.09
COL18A1-205ENST00000423214 CC2D1BQ5T0F9 858 aaKnown RBP21.87■■□□□ 1.09
COL18A1-205ENST00000423214 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
COL18A1-205ENST00000423214 KCPQ6ZWJ8 1503 aa21.86■■□□□ 1.09
COL18A1-205ENST00000423214 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
COL18A1-205ENST00000423214 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
COL18A1-205ENST00000423214 USP42Q9H9J4 1324 aaKnown RBP21.84■■□□□ 1.09
COL18A1-205ENST00000423214 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
COL18A1-205ENST00000423214 COL3A1P02461 1466 aaPredicted RBP21.83■■□□□ 1.09
COL18A1-205ENST00000423214 A0A0G2JLW4 131 aa21.83■■□□□ 1.09
COL18A1-205ENST00000423214 RNMTO43148 476 aaKnown RBP21.83■■□□□ 1.09
COL18A1-205ENST00000423214 SRP68Q9UHB9 627 aaKnown RBP21.83■■□□□ 1.09
COL18A1-205ENST00000423214 DLEC1Q9Y238 1755 aa21.83■■□□□ 1.09
COL18A1-205ENST00000423214 PER1O15534 1290 aaPredicted RBP21.81■■□□□ 1.08
COL18A1-205ENST00000423214 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
COL18A1-205ENST00000423214 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
COL18A1-205ENST00000423214 NPC1L1Q9UHC9 1359 aa21.81■■□□□ 1.08
COL18A1-205ENST00000423214 FCHSD2O94868 740 aa21.8■■□□□ 1.08
COL18A1-205ENST00000423214 DPEP1P16444 411 aa21.8■■□□□ 1.08
COL18A1-205ENST00000423214 DNAJC10Q8IXB1 793 aa21.8■■□□□ 1.08
COL18A1-205ENST00000423214 NRXN2Q9P2S2 1712 aa21.8■■□□□ 1.08
COL18A1-205ENST00000423214 SBF1O95248 1867 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 SCN7AQ01118 1682 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 COL15A1P39059 1388 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 ZPR1O75312 459 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 SLC39A6Q13433 755 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 FKBP8Q14318 412 aa21.79■■□□□ 1.08
COL18A1-205ENST00000423214 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
COL18A1-205ENST00000423214 INTS5Q6P9B9 1019 aaKnown RBP21.78■■□□□ 1.08
COL18A1-205ENST00000423214 SOS1Q07889 1333 aaPredicted RBP21.78■■□□□ 1.08
COL18A1-205ENST00000423214 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
COL18A1-205ENST00000423214 CEP350Q5VT06 3117 aa21.77■■□□□ 1.08
COL18A1-205ENST00000423214 DDR1Q08345 913 aa21.76■■□□□ 1.07
COL18A1-205ENST00000423214 ARHGAP27Q6ZUM4 889 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms