RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 SRGAP3O43295 1099 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 EYA3Q99504 573 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 ZNF76P36508 570 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 UTP14AQ9BVJ6 771 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 HOOK1Q9UJC3 728 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-202ENST00000418600 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ABCC1P33527 1531 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 ATP6V1DQ9Y5K8 247 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMEM94Q12767 1356 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
SYNGAP1-202ENST00000418600 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 LDHCP07864 332 aa20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 PCMTD1Q96MG8 357 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 MPHOSPH6Q99547 160 aaKnown RBP20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 MKNK2Q9HBH9 465 aa20.28■□□□□ 0.84
SYNGAP1-202ENST00000418600 H0YIN7 160 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 C1orf115Q9H7X2 142 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 HLA-DOAP06340 250 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 TSR1Q2NL82 804 aaKnown RBP20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 SCLT1Q96NL6 688 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
SYNGAP1-202ENST00000418600 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.83
SYNGAP1-202ENST00000418600 PANK1Q8TE04 598 aa20.27■□□□□ 0.83
SYNGAP1-202ENST00000418600 FLAD1Q8NFF5 587 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 GSTO1P78417 241 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF335Q9H4Z2 1342 aaPredicted RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 KRT18P05783 430 aaKnown RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 NUP133Q8WUM0 1156 aa20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
SYNGAP1-202ENST00000418600 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 VEZTQ9HBM0 779 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 TNIP1Q15025 636 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAP3K12Q12852 859 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
SYNGAP1-202ENST00000418600 GOLGA6L1Q8N7Z2 621 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 CT47B1P0C2W7 299 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 AAMPQ13685 434 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
SYNGAP1-202ENST00000418600 BAG3O95817 575 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 FAM196AQ6ZSG2 479 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 DCAF5Q96JK2 942 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 TPM3P06753 285 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 UGGT1Q9NYU2 1555 aa20.22■□□□□ 0.83
SYNGAP1-202ENST00000418600 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZC3H12CQ9C0D7 883 aaKnown RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 MAP3K2Q9Y2U5 619 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ANKRD20A12PQ8NF67 263 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 DPY19L2Q6NUT2 758 aa20.21■□□□□ 0.83
SYNGAP1-202ENST00000418600 SHANK2Q9UPX8 1470 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 SLC39A6Q13433 755 aa20.2■□□□□ 0.82
SYNGAP1-202ENST00000418600 HSP90AB2PQ58FF8 381 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 FLT4P35916 1363 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 LDHAL6AQ6ZMR3 332 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 EPS15P42566 896 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 TNNI2P48788 182 aa20.19■□□□□ 0.82
SYNGAP1-202ENST00000418600 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 MATR3P43243 847 aaKnown RBP eCLIP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 IP6K1Q92551 441 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 SEC63Q9UGP8 760 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 TPM1P09493 284 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 CUL5Q93034 780 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 EHMT1Q9H9B1 1298 aa20.18■□□□□ 0.82
SYNGAP1-202ENST00000418600 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms