RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
GABRE-202ENST00000417300 E9PSI1 815 aa15.53■□□□□ 0.08
GABRE-202ENST00000417300 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
GABRE-202ENST00000417300 TRMT2AQ8IZ69 625 aaKnown RBP15.53■□□□□ 0.08
GABRE-202ENST00000417300 PHACTR3Q96KR7 559 aa15.53■□□□□ 0.08
GABRE-202ENST00000417300 ERBB3P21860 1342 aa15.52■□□□□ 0.08
GABRE-202ENST00000417300 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
GABRE-202ENST00000417300 HTRA3P83110 453 aa15.52■□□□□ 0.08
GABRE-202ENST00000417300 NEUROD2Q15784 382 aa15.52■□□□□ 0.08
GABRE-202ENST00000417300 TRIM35Q9UPQ4 493 aa15.52■□□□□ 0.08
GABRE-202ENST00000417300 RIPK4P57078 832 aa15.51■□□□□ 0.07
GABRE-202ENST00000417300 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
GABRE-202ENST00000417300 ANKRD24Q8TF21 1146 aa15.51■□□□□ 0.07
GABRE-202ENST00000417300 LTV1Q96GA3 475 aaPredicted RBP15.51■□□□□ 0.07
GABRE-202ENST00000417300 AXIN2Q9Y2T1 843 aa15.51■□□□□ 0.07
GABRE-202ENST00000417300 IL16Q14005 1332 aa15.5■□□□□ 0.07
GABRE-202ENST00000417300 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
GABRE-202ENST00000417300 WDR90Q96KV7 1748 aa15.49■□□□□ 0.07
GABRE-202ENST00000417300 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
GABRE-202ENST00000417300 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
GABRE-202ENST00000417300 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
GABRE-202ENST00000417300 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
GABRE-202ENST00000417300 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
GABRE-202ENST00000417300 PLEKHG2Q9H7P9 1386 aa15.48■□□□□ 0.07
GABRE-202ENST00000417300 BCL9O00512 1426 aa15.47■□□□□ 0.07
GABRE-202ENST00000417300 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
GABRE-202ENST00000417300 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
GABRE-202ENST00000417300 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.07
GABRE-202ENST00000417300 COL5A2P05997 1499 aaPredicted RBP15.46■□□□□ 0.06
GABRE-202ENST00000417300 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
GABRE-202ENST00000417300 HSPA1AP0DMV8 641 aaKnown RBP15.45■□□□□ 0.06
GABRE-202ENST00000417300 HSPA1BP0DMV9 641 aaKnown RBP15.45■□□□□ 0.06
GABRE-202ENST00000417300 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
GABRE-202ENST00000417300 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
GABRE-202ENST00000417300 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
GABRE-202ENST00000417300 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
GABRE-202ENST00000417300 CRB1P82279 1406 aa15.44■□□□□ 0.06
GABRE-202ENST00000417300 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
GABRE-202ENST00000417300 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
GABRE-202ENST00000417300 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
GABRE-202ENST00000417300 HTATSF1O43719 755 aaKnown RBP15.42■□□□□ 0.06
GABRE-202ENST00000417300 RBM46Q8TBY0 533 aaKnown RBP15.42■□□□□ 0.06
GABRE-202ENST00000417300 NEFLP07196 543 aa15.41■□□□□ 0.06
GABRE-202ENST00000417300 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
GABRE-202ENST00000417300 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
GABRE-202ENST00000417300 IFT57Q9NWB7 429 aa15.41■□□□□ 0.06
GABRE-202ENST00000417300 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
GABRE-202ENST00000417300 PKD1L3Q7Z443 1732 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 PAPPAQ13219 1627 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 TOM1L2Q6ZVM7 507 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
GABRE-202ENST00000417300 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 CDCA7Q9BWT1 371 aaPredicted RBP15.4■□□□□ 0.06
GABRE-202ENST00000417300 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 TFCP2L1Q9NZI6 479 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 PNPLA7Q6ZV29 1317 aa15.4■□□□□ 0.06
GABRE-202ENST00000417300 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
GABRE-202ENST00000417300 GNAI1P63096 354 aa15.39■□□□□ 0.05
GABRE-202ENST00000417300 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
GABRE-202ENST00000417300 COL24A1Q17RW2 1714 aa15.39■□□□□ 0.05
GABRE-202ENST00000417300 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 MEGF6O75095 1541 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 GNAT3A8MTJ3 354 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 FSTL1Q12841 308 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
GABRE-202ENST00000417300 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 THUMPD2Q9BTF0 503 aaKnown RBP15.38■□□□□ 0.05
GABRE-202ENST00000417300 LRRC4BQ9NT99 713 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
GABRE-202ENST00000417300 TNS2Q63HR2 1409 aa15.37■□□□□ 0.05
GABRE-202ENST00000417300 EXOC5O00471 708 aa15.37■□□□□ 0.05
GABRE-202ENST00000417300 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
GABRE-202ENST00000417300 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
GABRE-202ENST00000417300 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
GABRE-202ENST00000417300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.053e-10■■□□□ 11.6
GABRE-202ENST00000417300 VIRMAQ69YN4 1812 aaKnown RBP15.37■□□□□ 0.05
GABRE-202ENST00000417300 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
GABRE-202ENST00000417300 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
GABRE-202ENST00000417300 TSR2Q969E8 191 aaKnown RBP15.36■□□□□ 0.05
GABRE-202ENST00000417300 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
GABRE-202ENST00000417300 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
GABRE-202ENST00000417300 MSH5O43196 834 aa15.35■□□□□ 0.05
GABRE-202ENST00000417300 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
GABRE-202ENST00000417300 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
GABRE-202ENST00000417300 MCM10Q7L590 875 aa15.35■□□□□ 0.05
GABRE-202ENST00000417300 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
GABRE-202ENST00000417300 FKBP8Q14318 412 aa15.34■□□□□ 0.05
GABRE-202ENST00000417300 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
GABRE-202ENST00000417300 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
GABRE-202ENST00000417300 CHL1O00533 1208 aa15.33■□□□□ 0.04
GABRE-202ENST00000417300 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
GABRE-202ENST00000417300 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
GABRE-202ENST00000417300 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
GABRE-202ENST00000417300 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
GABRE-202ENST00000417300 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
GABRE-202ENST00000417300 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
GABRE-202ENST00000417300 SPG7Q9UQ90 795 aa15.32■□□□□ 0.04
GABRE-202ENST00000417300 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms