RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 DCAF5Q96JK2 942 aa15.67■□□□□ 0.1
CRIM1-202ENST00000413985 A0A1W2PP64 1363 aa15.66■□□□□ 0.1
CRIM1-202ENST00000413985 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
CRIM1-202ENST00000413985 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
CRIM1-202ENST00000413985 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
CRIM1-202ENST00000413985 MKRN1Q9UHC7 482 aaKnown RBP15.65■□□□□ 0.1
CRIM1-202ENST00000413985 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
CRIM1-202ENST00000413985 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
CRIM1-202ENST00000413985 RASSF7Q02833 373 aa15.64■□□□□ 0.09
CRIM1-202ENST00000413985 HDGFL2Q7Z4V5 671 aaPredicted RBP15.64■□□□□ 0.09
CRIM1-202ENST00000413985 CCDC87Q9NVE4 849 aa15.64■□□□□ 0.09
CRIM1-202ENST00000413985 CGNL1Q0VF96 1302 aa15.64■□□□□ 0.09
CRIM1-202ENST00000413985 RRS1Q15050 365 aaKnown RBP15.63■□□□□ 0.09
CRIM1-202ENST00000413985 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
CRIM1-202ENST00000413985 TMF1P82094 1093 aa15.62■□□□□ 0.09
CRIM1-202ENST00000413985 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
CRIM1-202ENST00000413985 GYS1P13807 737 aa15.61■□□□□ 0.09
CRIM1-202ENST00000413985 CHRNA5P30532 468 aa15.61■□□□□ 0.09
CRIM1-202ENST00000413985 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
CRIM1-202ENST00000413985 DALRD3Q5D0E6 543 aaKnown RBP15.61■□□□□ 0.09
CRIM1-202ENST00000413985 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
CRIM1-202ENST00000413985 VEGFAP15692 232 aaPredicted RBP15.6■□□□□ 0.09
CRIM1-202ENST00000413985 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
CRIM1-202ENST00000413985 PRDM10Q9NQV6 1147 aa15.6■□□□□ 0.09
CRIM1-202ENST00000413985 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
CRIM1-202ENST00000413985 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
CRIM1-202ENST00000413985 PARP3Q9Y6F1 533 aa15.59■□□□□ 0.09
CRIM1-202ENST00000413985 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 GLTPD2A6NH11 291 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 POTECB2RU33 542 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 ABHD8Q96I13 439 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 COG3Q96JB2 828 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 RTCBQ9Y3I0 505 aaKnown RBP15.58■□□□□ 0.08
CRIM1-202ENST00000413985 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
CRIM1-202ENST00000413985 KDM6AO15550 1401 aaPredicted RBP15.58■□□□□ 0.08
CRIM1-202ENST00000413985 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
CRIM1-202ENST00000413985 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
CRIM1-202ENST00000413985 ATG3Q9NT62 314 aa15.56■□□□□ 0.08
CRIM1-202ENST00000413985 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
CRIM1-202ENST00000413985 KDRP35968 1356 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 LBX1P52954 281 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 DDR1Q08345 913 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 HSP90AB2PQ58FF8 381 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 TMOD3Q9NYL9 352 aa15.55■□□□□ 0.08
CRIM1-202ENST00000413985 CNTNAP1P78357 1384 aa15.54■□□□□ 0.08
CRIM1-202ENST00000413985 POTEIP0CG38 1075 aa15.54■□□□□ 0.08
CRIM1-202ENST00000413985 POTEJP0CG39 1038 aa15.54■□□□□ 0.08
CRIM1-202ENST00000413985 CTCFP49711 727 aaPredicted RBP15.54■□□□□ 0.08
CRIM1-202ENST00000413985 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
CRIM1-202ENST00000413985 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
CRIM1-202ENST00000413985 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
CRIM1-202ENST00000413985 ZC3H4Q9UPT8 1303 aaKnown RBP15.53■□□□□ 0.08
CRIM1-202ENST00000413985 RFC4P35249 363 aa15.53■□□□□ 0.08
CRIM1-202ENST00000413985 SRP68Q9UHB9 627 aaKnown RBP15.53■□□□□ 0.08
CRIM1-202ENST00000413985 FKBP8Q14318 412 aa15.52■□□□□ 0.08
CRIM1-202ENST00000413985 MYH14Q7Z406 1995 aaKnown RBP15.52■□□□□ 0.07
CRIM1-202ENST00000413985 LMNB1P20700 586 aa15.51■□□□□ 0.07
CRIM1-202ENST00000413985 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
CRIM1-202ENST00000413985 AIDAQ96BJ3 306 aa15.51■□□□□ 0.07
CRIM1-202ENST00000413985 INSRP06213 1382 aa15.5■□□□□ 0.07
CRIM1-202ENST00000413985 ADRA2BP18089 450 aa15.5■□□□□ 0.07
CRIM1-202ENST00000413985 VEGFBP49765 207 aa15.5■□□□□ 0.07
CRIM1-202ENST00000413985 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
CRIM1-202ENST00000413985 CCDC85CA6NKD9 419 aa15.49■□□□□ 0.07
CRIM1-202ENST00000413985 RPS6KA4O75676 772 aa15.49■□□□□ 0.07
CRIM1-202ENST00000413985 HSPA8P11142 646 aaKnown RBP15.49■□□□□ 0.07
CRIM1-202ENST00000413985 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
CRIM1-202ENST00000413985 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
CRIM1-202ENST00000413985 CNTNAP4Q9C0A0 1308 aa15.48■□□□□ 0.07
CRIM1-202ENST00000413985 NFKBIEO00221 500 aa15.48■□□□□ 0.07
CRIM1-202ENST00000413985 RC3H1Q5TC82 1133 aaKnown RBP15.48■□□□□ 0.07
CRIM1-202ENST00000413985 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
CRIM1-202ENST00000413985 WBP1LQ9NX94 342 aa15.48■□□□□ 0.07
CRIM1-202ENST00000413985 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
CRIM1-202ENST00000413985 NCAPD2Q15021 1401 aa15.47■□□□□ 0.07
CRIM1-202ENST00000413985 ZNF831Q5JPB2 1677 aa15.47■□□□□ 0.07
CRIM1-202ENST00000413985 PHKG2P15735 406 aa15.46■□□□□ 0.07
CRIM1-202ENST00000413985 RGS19P49795 217 aa15.46■□□□□ 0.07
CRIM1-202ENST00000413985 SPG7Q9UQ90 795 aa15.46■□□□□ 0.07
CRIM1-202ENST00000413985 FLT4P35916 1363 aa15.46■□□□□ 0.07
CRIM1-202ENST00000413985 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
CRIM1-202ENST00000413985 USP42Q9H9J4 1324 aaKnown RBP15.45■□□□□ 0.06
CRIM1-202ENST00000413985 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
CRIM1-202ENST00000413985 FYB1O15117 783 aa15.45■□□□□ 0.06
CRIM1-202ENST00000413985 SIN3AQ96ST3 1273 aa15.44■□□□□ 0.06
CRIM1-202ENST00000413985 AFDNP55196 1824 aaKnown RBP15.44■□□□□ 0.06
CRIM1-202ENST00000413985 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
CRIM1-202ENST00000413985 TM4SF1P30408 202 aa15.43■□□□□ 0.06
CRIM1-202ENST00000413985 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
CRIM1-202ENST00000413985 DDNO94850 711 aaPredicted RBP15.42■□□□□ 0.06
CRIM1-202ENST00000413985 CRKLP46109 303 aaKnown RBP15.42■□□□□ 0.06
CRIM1-202ENST00000413985 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
CRIM1-202ENST00000413985 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
CRIM1-202ENST00000413985 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
CRIM1-202ENST00000413985 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
CRIM1-202ENST00000413985 TMEM88BA6NKF7 163 aa15.4■□□□□ 0.06
CRIM1-202ENST00000413985 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
CRIM1-202ENST00000413985 TTLL6Q8N841 843 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms