RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 GNPATO15228 680 aa33.52■■■□□ 2.96
AC005540.1-201ENST00000413911 PLEKHG2Q9H7P9 1386 aa33.51■■■□□ 2.96
AC005540.1-201ENST00000413911 KDRP35968 1356 aa33.5■■■□□ 2.95
AC005540.1-201ENST00000413911 SENP3-EIF4A1A0A087X0R7 540 aa33.48■■■□□ 2.95
AC005540.1-201ENST00000413911 KDM6AO15550 1401 aaPredicted RBP33.47■■■□□ 2.95
AC005540.1-201ENST00000413911 GIGYF1O75420 1035 aaPredicted RBP33.47■■■□□ 2.95
AC005540.1-201ENST00000413911 AEBP1Q8IUX7 1158 aa33.47■■■□□ 2.95
AC005540.1-201ENST00000413911 WWC3Q9ULE0 1092 aa33.47■■■□□ 2.95
AC005540.1-201ENST00000413911 ERVV-2B6SEH9 535 aa33.46■■■□□ 2.95
AC005540.1-201ENST00000413911 DCAF5Q96JK2 942 aa33.45■■■□□ 2.95
AC005540.1-201ENST00000413911 PLEKHO1Q53GL0 409 aaPredicted RBP33.44■■■□□ 2.94
AC005540.1-201ENST00000413911 MORC1Q86VD1 984 aa33.44■■■□□ 2.94
AC005540.1-201ENST00000413911 ZNF530Q6P9A1 599 aaPredicted RBP33.43■■■□□ 2.94
AC005540.1-201ENST00000413911 RBM42Q9BTD8 480 aaKnown RBP33.42■■■□□ 2.94
AC005540.1-201ENST00000413911 ATP10DQ9P241 1426 aa33.42■■■□□ 2.94
AC005540.1-201ENST00000413911 ZNF831Q5JPB2 1677 aa33.4■■■□□ 2.94
AC005540.1-201ENST00000413911 HSP90AB1P08238 724 aaKnown RBP33.4■■■□□ 2.94
AC005540.1-201ENST00000413911 MMP10P09238 476 aa33.39■■■□□ 2.94
AC005540.1-201ENST00000413911 AMOTQ4VCS5 1084 aa33.39■■■□□ 2.94
AC005540.1-201ENST00000413911 CCER1Q8TC90 406 aaPredicted RBP33.38■■■□□ 2.93
AC005540.1-201ENST00000413911 ADCY9O60503 1353 aa33.37■■■□□ 2.93
AC005540.1-201ENST00000413911 COL5A3P25940 1745 aaPredicted RBP33.37■■■□□ 2.93
AC005540.1-201ENST00000413911 CABP4P57796 275 aa33.37■■■□□ 2.93
AC005540.1-201ENST00000413911 RTCBQ9Y3I0 505 aaKnown RBP33.37■■■□□ 2.93
AC005540.1-201ENST00000413911 TRAPPC3LQ5T215 181 aa33.36■■■□□ 2.93
AC005540.1-201ENST00000413911 SULT6B1Q6IMI4 303 aa33.36■■■□□ 2.93
AC005540.1-201ENST00000413911 IL13P35225 146 aa33.35■■■□□ 2.93
AC005540.1-201ENST00000413911 RC3H1Q5TC82 1133 aaKnown RBP33.35■■■□□ 2.93
AC005540.1-201ENST00000413911 ARHGEF1Q92888 912 aaKnown RBP33.35■■■□□ 2.93
AC005540.1-201ENST00000413911 MTHFSP49914 203 aa33.34■■■□□ 2.93
AC005540.1-201ENST00000413911 KNSTRNQ9Y448 316 aa33.34■■■□□ 2.93
AC005540.1-201ENST00000413911 CNTNAP4Q9C0A0 1308 aa33.33■■■□□ 2.93
AC005540.1-201ENST00000413911 MYH14Q7Z406 1995 aaKnown RBP33.33■■■□□ 2.93
AC005540.1-201ENST00000413911 AMER1Q5JTC6 1135 aaPredicted RBP33.33■■■□□ 2.93
AC005540.1-201ENST00000413911 NFATC2IPQ8NCF5 419 aa33.32■■■□□ 2.92
AC005540.1-201ENST00000413911 KIAA1551Q9HCM1 1747 aa33.32■■■□□ 2.92
AC005540.1-201ENST00000413911 CICQ96RK0 1608 aaPredicted RBP33.31■■■□□ 2.92
AC005540.1-201ENST00000413911 RPS6KA4O75676 772 aa33.31■■■□□ 2.92
AC005540.1-201ENST00000413911 CEP350Q5VT06 3117 aa33.31■■■□□ 2.92
AC005540.1-201ENST00000413911 PXDNLA1KZ92 1463 aa33.31■■■□□ 2.92
AC005540.1-201ENST00000413911 PTCD1O75127 700 aaKnown RBP33.3■■■□□ 2.92
AC005540.1-201ENST00000413911 GYS1P13807 737 aa33.3■■■□□ 2.92
AC005540.1-201ENST00000413911 C1orf141Q5JVX7 400 aa33.3■■■□□ 2.92
AC005540.1-201ENST00000413911 KIF13BQ9NQT8 1826 aa33.3■■■□□ 2.92
AC005540.1-201ENST00000413911 NLGN1Q8N2Q7 840 aa33.29■■■□□ 2.92
AC005540.1-201ENST00000413911 ADRA2BP18089 450 aa33.28■■■□□ 2.92
AC005540.1-201ENST00000413911 ZNF526Q8TF50 670 aaPredicted RBP33.27■■■□□ 2.92
AC005540.1-201ENST00000413911 KIF7Q2M1P5 1343 aa33.27■■■□□ 2.92
AC005540.1-201ENST00000413911 GPBP1L1Q9HC44 474 aaPredicted RBP33.26■■■□□ 2.91
AC005540.1-201ENST00000413911 N4BP2Q86UW6 1770 aaPredicted RBP33.26■■■□□ 2.91
AC005540.1-201ENST00000413911 C10orf71Q711Q0 1435 aa33.26■■■□□ 2.91
AC005540.1-201ENST00000413911 C4AP0C0L4 1744 aa33.25■■■□□ 2.91
AC005540.1-201ENST00000413911 A0A0G2JLW4 131 aa33.24■■■□□ 2.91
AC005540.1-201ENST00000413911 RFC4P35249 363 aa33.24■■■□□ 2.91
AC005540.1-201ENST00000413911 CRKLP46109 303 aaKnown RBP33.24■■■□□ 2.91
AC005540.1-201ENST00000413911 TJP1Q07157 1748 aa33.23■■■□□ 2.91
AC005540.1-201ENST00000413911 SCN11AQ9UI33 1791 aa33.23■■■□□ 2.91
AC005540.1-201ENST00000413911 TGFB2P61812 414 aa33.22■■■□□ 2.91
AC005540.1-201ENST00000413911 LGR6Q9HBX8 967 aa33.21■■■□□ 2.91
AC005540.1-201ENST00000413911 SRP68Q9UHB9 627 aaKnown RBP33.21■■■□□ 2.91
AC005540.1-201ENST00000413911 PER1O15534 1290 aaPredicted RBP33.19■■■□□ 2.9
AC005540.1-201ENST00000413911 DPEP1P16444 411 aa33.18■■■□□ 2.9
AC005540.1-201ENST00000413911 AKAP4Q5JQC9 854 aa33.18■■■□□ 2.9
AC005540.1-201ENST00000413911 INTS5Q6P9B9 1019 aaKnown RBP33.18■■■□□ 2.9
AC005540.1-201ENST00000413911 HMOX1P09601 288 aa33.17■■■□□ 2.9
AC005540.1-201ENST00000413911 CCDC87Q9NVE4 849 aa33.17■■■□□ 2.9
AC005540.1-201ENST00000413911 BCS1LQ9Y276 419 aa33.17■■■□□ 2.9
AC005540.1-201ENST00000413911 PARP3Q9Y6F1 533 aa33.17■■■□□ 2.9
AC005540.1-201ENST00000413911 FKBP8Q14318 412 aa33.16■■■□□ 2.9
AC005540.1-201ENST00000413911 SLC52A2Q9HAB3 445 aa33.15■■■□□ 2.9
AC005540.1-201ENST00000413911 ADAMTS7Q9UKP4 1686 aa33.15■■■□□ 2.9
AC005540.1-201ENST00000413911 USP42Q9H9J4 1324 aaKnown RBP33.14■■■□□ 2.9
AC005540.1-201ENST00000413911 KCNA3P22001 575 aa33.14■■■□□ 2.9
AC005540.1-201ENST00000413911 DNAJC10Q8IXB1 793 aa33.14■■■□□ 2.9
AC005540.1-201ENST00000413911 DDR1Q08345 913 aa33.13■■■□□ 2.89
AC005540.1-201ENST00000413911 BRCA1P38398 1863 aaKnown RBP33.12■■■□□ 2.89
AC005540.1-201ENST00000413911 RNMTO43148 476 aaKnown RBP33.12■■■□□ 2.89
AC005540.1-201ENST00000413911 SLC39A6Q13433 755 aa33.12■■■□□ 2.89
AC005540.1-201ENST00000413911 MRC1P22897 1456 aa33.12■■■□□ 2.89
AC005540.1-201ENST00000413911 MTHFSDQ2M296 383 aaKnown RBP33.11■■■□□ 2.89
AC005540.1-201ENST00000413911 CC2D1BQ5T0F9 858 aaKnown RBP33.11■■■□□ 2.89
AC005540.1-201ENST00000413911 KIF3CO14782 793 aa33.1■■■□□ 2.89
AC005540.1-201ENST00000413911 FCHSD2O94868 740 aa33.08■■■□□ 2.89
AC005540.1-201ENST00000413911 ARHGAP27Q6ZUM4 889 aa33.08■■■□□ 2.89
AC005540.1-201ENST00000413911 KCPQ6ZWJ8 1503 aa33.07■■■□□ 2.89
AC005540.1-201ENST00000413911 VIRMAQ69YN4 1812 aaKnown RBP33.07■■■□□ 2.88
AC005540.1-201ENST00000413911 DIAPH1O60610 1272 aaKnown RBP33.06■■■□□ 2.88
AC005540.1-201ENST00000413911 CYP19A1P11511 503 aaPredicted RBP33.06■■■□□ 2.88
AC005540.1-201ENST00000413911 SOS1Q07889 1333 aaPredicted RBP33.05■■■□□ 2.88
AC005540.1-201ENST00000413911 TM4SF1P30408 202 aa33.05■■■□□ 2.88
AC005540.1-201ENST00000413911 POLRMTO00411 1230 aaKnown RBP33.03■■■□□ 2.88
AC005540.1-201ENST00000413911 HSPA6P17066 643 aa33.03■■■□□ 2.88
AC005540.1-201ENST00000413911 USPL1Q5W0Q7 1092 aa33.03■■■□□ 2.88
AC005540.1-201ENST00000413911 COL3A1P02461 1466 aaPredicted RBP33.02■■■□□ 2.88
AC005540.1-201ENST00000413911 CHRNA5P30532 468 aa33.01■■■□□ 2.87
AC005540.1-201ENST00000413911 PIM2Q9P1W9 311 aa33■■■□□ 2.87
AC005540.1-201ENST00000413911 ZBTB1Q9Y2K1 713 aa33■■■□□ 2.87
AC005540.1-201ENST00000413911 ARFGEF1Q9Y6D6 1849 aa33■■■□□ 2.87
AC005540.1-201ENST00000413911 CNGB1Q14028 1251 aaPredicted RBP32.99■■■□□ 2.87
AC005540.1-201ENST00000413911 ZPR1O75312 459 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms