RNA–Protein interactions for RNA: ENST00000408946.6

PYM1-203, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 1 (best) BASIC

Gene PYM1, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-203ENST00000408946 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
PYM1-203ENST00000408946 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
PYM1-203ENST00000408946 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
PYM1-203ENST00000408946 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
PYM1-203ENST00000408946 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
PYM1-203ENST00000408946 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
PYM1-203ENST00000408946 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
PYM1-203ENST00000408946 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
PYM1-203ENST00000408946 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
PYM1-203ENST00000408946 PKD1L3Q7Z443 1732 aa17.4■□□□□ 0.38
PYM1-203ENST00000408946 FYB1O15117 783 aa17.39■□□□□ 0.37
PYM1-203ENST00000408946 DPEP1P16444 411 aa17.39■□□□□ 0.37
PYM1-203ENST00000408946 C9orf131Q5VYM1 1079 aa17.39■□□□□ 0.37
PYM1-203ENST00000408946 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.37
PYM1-203ENST00000408946 TESK2Q96S53 571 aa17.39■□□□□ 0.37
PYM1-203ENST00000408946 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
PYM1-203ENST00000408946 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
PYM1-203ENST00000408946 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
PYM1-203ENST00000408946 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
PYM1-203ENST00000408946 INSRP06213 1382 aa17.38■□□□□ 0.37
PYM1-203ENST00000408946 TGFB2P61812 414 aa17.37■□□□□ 0.37
PYM1-203ENST00000408946 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
PYM1-203ENST00000408946 NKX1-1Q15270 411 aaPredicted RBP17.37■□□□□ 0.37
PYM1-203ENST00000408946 FCHSD2O94868 740 aa17.36■□□□□ 0.37
PYM1-203ENST00000408946 KCNA3P22001 575 aa17.36■□□□□ 0.37
PYM1-203ENST00000408946 PRELPP51888 382 aa17.36■□□□□ 0.37
PYM1-203ENST00000408946 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
PYM1-203ENST00000408946 ATP6V1AP38606 617 aa17.35■□□□□ 0.37
PYM1-203ENST00000408946 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
PYM1-203ENST00000408946 WASHC2AQ641Q2 1341 aa17.35■□□□□ 0.37
PYM1-203ENST00000408946 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
PYM1-203ENST00000408946 FLT4P35916 1363 aa17.34■□□□□ 0.37
PYM1-203ENST00000408946 ATG3Q9NT62 314 aa17.34■□□□□ 0.37
PYM1-203ENST00000408946 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
PYM1-203ENST00000408946 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
PYM1-203ENST00000408946 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
PYM1-203ENST00000408946 FSTL1Q12841 308 aa17.33■□□□□ 0.36
PYM1-203ENST00000408946 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
PYM1-203ENST00000408946 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
PYM1-203ENST00000408946 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
PYM1-203ENST00000408946 KDRP35968 1356 aa17.32■□□□□ 0.36
PYM1-203ENST00000408946 GYS1P13807 737 aa17.32■□□□□ 0.36
PYM1-203ENST00000408946 TMF1P82094 1093 aa17.32■□□□□ 0.36
PYM1-203ENST00000408946 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
PYM1-203ENST00000408946 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
PYM1-203ENST00000408946 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
PYM1-203ENST00000408946 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
PYM1-203ENST00000408946 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
PYM1-203ENST00000408946 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
PYM1-203ENST00000408946 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
PYM1-203ENST00000408946 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
PYM1-203ENST00000408946 DCAF5Q96JK2 942 aa17.29■□□□□ 0.36
PYM1-203ENST00000408946 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
PYM1-203ENST00000408946 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
PYM1-203ENST00000408946 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
PYM1-203ENST00000408946 PHKG2P15735 406 aa17.28■□□□□ 0.36
PYM1-203ENST00000408946 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
PYM1-203ENST00000408946 SBF1O95248 1867 aa17.28■□□□□ 0.36
PYM1-203ENST00000408946 ANP32CO43423 234 aa17.27■□□□□ 0.36
PYM1-203ENST00000408946 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
PYM1-203ENST00000408946 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
PYM1-203ENST00000408946 EYA1Q99502 592 aa17.27■□□□□ 0.36
PYM1-203ENST00000408946 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
PYM1-203ENST00000408946 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
PYM1-203ENST00000408946 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
PYM1-203ENST00000408946 KDM2BQ8NHM5 1336 aa17.26■□□□□ 0.35
PYM1-203ENST00000408946 CHRNA5P30532 468 aa17.26■□□□□ 0.35
PYM1-203ENST00000408946 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
PYM1-203ENST00000408946 PARP3Q9Y6F1 533 aa17.26■□□□□ 0.35
PYM1-203ENST00000408946 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
PYM1-203ENST00000408946 DDR1Q08345 913 aa17.25■□□□□ 0.35
PYM1-203ENST00000408946 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
PYM1-203ENST00000408946 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
PYM1-203ENST00000408946 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
PYM1-203ENST00000408946 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
PYM1-203ENST00000408946 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
PYM1-203ENST00000408946 RASSF7Q02833 373 aa17.24■□□□□ 0.35
PYM1-203ENST00000408946 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
PYM1-203ENST00000408946 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
PYM1-203ENST00000408946 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 RFC4P35249 363 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 FKBP8Q14318 412 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
PYM1-203ENST00000408946 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
PYM1-203ENST00000408946 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
PYM1-203ENST00000408946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■□ 24.5
PYM1-203ENST00000408946 ZNF831Q5JPB2 1677 aa17.22■□□□□ 0.35
PYM1-203ENST00000408946 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
PYM1-203ENST00000408946 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
PYM1-203ENST00000408946 ADAMTS7Q9UKP4 1686 aa17.17■□□□□ 0.34
PYM1-203ENST00000408946 POLRMTO00411 1230 aaKnown RBP17.17■□□□□ 0.34
PYM1-203ENST00000408946 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
PYM1-203ENST00000408946 POTECB2RU33 542 aa17.16■□□□□ 0.34
PYM1-203ENST00000408946 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
PYM1-203ENST00000408946 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
PYM1-203ENST00000408946 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
PYM1-203ENST00000408946 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
PYM1-203ENST00000408946 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms