RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 SMC3Q9UQE7 1217 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 CECR2Q9BXF3 1484 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 MTA2O94776 668 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 HSP90AB1P08238 724 aaKnown RBP6.98□□□□□ -1.29
CNGA1-202ENST00000402813 LONRF1Q17RB8 773 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 ALDH8A1Q9H2A2 487 aaPredicted RBP6.98□□□□□ -1.29
CNGA1-202ENST00000402813 CXorf56Q9H5V9 222 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 EID1Q9Y6B2 187 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 LZTS3O60299 673 aaPredicted RBP6.98□□□□□ -1.29
CNGA1-202ENST00000402813 TMEM164Q5U3C3 297 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 ANKRD13DQ6ZTN6 518 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 TMX1Q9H3N1 280 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 CHST12Q9NRB3 414 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 SYNJ1O43426 1573 aa6.98□□□□□ -1.29
CNGA1-202ENST00000402813 TBX3O15119 743 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 FECHP22830 423 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 ATICP31939 592 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 SERPINB4P48594 390 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 CLK1P49759 484 aaKnown RBP6.97□□□□□ -1.29
CNGA1-202ENST00000402813 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 FRS2Q8WU20 508 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 GOLGA1Q92805 767 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 TFIP11Q9UBB9 837 aaKnown RBP6.97□□□□□ -1.29
CNGA1-202ENST00000402813 SLC45A1Q9Y2W3 748 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 TNFRSF10BO14763 440 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 PLEKHG4Q58EX7 1191 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 PRPF38AQ8NAV1 312 aaKnown RBP6.97□□□□□ -1.29
CNGA1-202ENST00000402813 ZNF700Q9H0M5 742 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 YY1AP1Q9H869 796 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 ZMIZ1Q9ULJ6 1067 aa6.97□□□□□ -1.29
CNGA1-202ENST00000402813 DCAF8L1A6NGE4 600 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 CAND2O75155 1236 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 RNASEH2AO75792 299 aaKnown RBP6.96□□□□□ -1.29
CNGA1-202ENST00000402813 PDE4AP27815 886 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 CTHP32929 405 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 CCDC93Q567U6 631 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 SYCP2LQ5T4T6 812 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 CCDC89Q8N998 374 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 BIN2Q9UBW5 565 aaPredicted RBP6.96□□□□□ -1.29
CNGA1-202ENST00000402813 ASAP1Q9ULH1 1129 aa6.96□□□□□ -1.29
CNGA1-202ENST00000402813 DIS3Q9Y2L1 958 aaKnown RBP6.96□□□□□ -1.29
CNGA1-202ENST00000402813 KANK3Q6NY19 840 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 PAF1Q8N7H5 531 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 ERP27Q96DN0 273 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 BORCS6Q96GS4 357 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 POLG2Q9UHN1 485 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 MRVI1Q9Y6F6 885 aa6.96□□□□□ -1.3
CNGA1-202ENST00000402813 PDE6BP35913 854 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 MYSM1Q5VVJ2 828 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 ARNT2Q9HBZ2 717 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
CNGA1-202ENST00000402813 RBP3P10745 1247 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 NOS2P35228 1153 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 TAS1R3Q7RTX0 852 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 TSR2Q969E8 191 aaKnown RBP6.95□□□□□ -1.3
CNGA1-202ENST00000402813 CRISPLD2Q9H0B8 497 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 ALG2Q9H553 416 aa6.95□□□□□ -1.3
CNGA1-202ENST00000402813 VAMP4O75379 141 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 KIAA1958Q8N8K9 716 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 FMNL2Q96PY5 1086 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 RANBP17Q9H2T7 1088 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 ISY1Q9ULR0 285 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 MAFBQ9Y5Q3 323 aaPredicted RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 CASP2P42575 452 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 TRAPPC10P48553 1259 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 ZC3H12AQ5D1E8 599 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 TAF3Q5VWG9 929 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 RAVER1Q8IY67 606 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 OGFOD1Q8N543 542 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 CCDC47Q96A33 483 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 ENAMQ9NRM1 1142 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 CLIC5Q9NZA1 410 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 BICRAQ9NZM4 1560 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 EIF5P55010 431 aaKnown RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 INO80DQ53TQ3 878 aaPredicted RBP6.94□□□□□ -1.3
CNGA1-202ENST00000402813 CATIPQ7Z7H3 387 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 STK32AQ8WU08 396 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
CNGA1-202ENST00000402813 PRXQ9BXM0 1461 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 BPNT1O95861 308 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 RRM1P23921 792 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 CD151P48509 253 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 CLK2P49760 499 aaKnown RBP6.93□□□□□ -1.3
CNGA1-202ENST00000402813 IQCEQ6IPM2 695 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 KIF21AQ7Z4S6 1674 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 GNL2Q13823 731 aaKnown RBP6.93□□□□□ -1.3
CNGA1-202ENST00000402813 HIC1Q14526 733 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 WASHC4Q2M389 1173 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 HSCBQ8IWL3 235 aa6.93□□□□□ -1.3
CNGA1-202ENST00000402813 MRFAP1L1Q96HT8 127 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms