RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CTNNA3Q9UI47 895 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 TERF2Q15554 542 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
PUM3-202ENST00000397885 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
PUM3-202ENST00000397885 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
PUM3-202ENST00000397885 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
PUM3-202ENST00000397885 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 MORC1Q86VD1 984 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 RNF214Q8ND24 703 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 ANKRD36BQ8N2N9 1353 aa13.93□□□□□ -0.18
PUM3-202ENST00000397885 IGSF3O75054 1194 aa13.92□□□□□ -0.18
PUM3-202ENST00000397885 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
PUM3-202ENST00000397885 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
PUM3-202ENST00000397885 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
PUM3-202ENST00000397885 ZBTB40Q9NUA8 1239 aa13.92□□□□□ -0.18
PUM3-202ENST00000397885 QRICH2Q9H0J4 1663 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 YY1AP1Q9H869 796 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 CFAP53Q96M91 514 aa13.91□□□□□ -0.18
PUM3-202ENST00000397885 CDC45O75419 566 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
PUM3-202ENST00000397885 FAM177BA6PVY3 158 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
PUM3-202ENST00000397885 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 ORAI2Q96SN7 254 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 ZDHHC9Q9Y397 364 aa13.9□□□□□ -0.18
PUM3-202ENST00000397885 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 TTC12Q9H892 705 aaPredicted RBP13.89□□□□□ -0.19
PUM3-202ENST00000397885 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 ST18O60284 1047 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 TRIM27P14373 513 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
PUM3-202ENST00000397885 LNPKQ9C0E8 428 aa13.89□□□□□ -0.19
PUM3-202ENST00000397885 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
PUM3-202ENST00000397885 LRP6O75581 1613 aa13.88□□□□□ -0.19
PUM3-202ENST00000397885 ADCY5O95622 1261 aa13.88□□□□□ -0.19
PUM3-202ENST00000397885 PKP1Q13835 747 aa13.88□□□□□ -0.19
PUM3-202ENST00000397885 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 KIF18AQ8NI77 898 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 DDX17Q92841 729 aaKnown RBP13.87□□□□□ -0.19
PUM3-202ENST00000397885 FAM53CQ9NYF3 392 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
PUM3-202ENST00000397885 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
PUM3-202ENST00000397885 SMTNL1A8MU46 457 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 ESCO1Q5FWF5 840 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 NSD2O96028 1365 aa13.87□□□□□ -0.19
PUM3-202ENST00000397885 CAPN2P17655 700 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 GOLGA6L6A8MZA4 724 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 ADGRB1O14514 1584 aa13.86□□□□□ -0.19
PUM3-202ENST00000397885 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
PUM3-202ENST00000397885 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
PUM3-202ENST00000397885 KDM4AO75164 1064 aa13.85□□□□□ -0.19
PUM3-202ENST00000397885 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
PUM3-202ENST00000397885 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
PUM3-202ENST00000397885 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
PUM3-202ENST00000397885 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
PUM3-202ENST00000397885 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
PUM3-202ENST00000397885 SMC4Q9NTJ3 1288 aa13.85□□□□□ -0.19
PUM3-202ENST00000397885 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 MMP14P50281 582 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
PUM3-202ENST00000397885 PRAM1Q96QH2 718 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 GEMIN8Q9NWZ8 242 aaKnown RBP13.84□□□□□ -0.19
PUM3-202ENST00000397885 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
PUM3-202ENST00000397885 BRD1O95696 1058 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
PUM3-202ENST00000397885 USP26Q9BXU7 913 aa13.84□□□□□ -0.19
PUM3-202ENST00000397885 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 TRIM34Q9BYJ4 488 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 MCM2P49736 904 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 MTHFSP49914 203 aa13.82□□□□□ -0.2
PUM3-202ENST00000397885 ZGPATQ8N5A5 531 aaKnown RBP13.82□□□□□ -0.2
PUM3-202ENST00000397885 ZNF397Q8NF99 534 aaPredicted RBP13.82□□□□□ -0.2
PUM3-202ENST00000397885 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
PUM3-202ENST00000397885 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 CCDC183Q5T5S1 534 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 PXDNQ92626 1479 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 SLFNL1Q499Z3 407 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 ANKRD45Q5TZF3 282 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms