RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 GTF2E1P29083 439 aaPredicted RBP7.68□□□□□ -1.18
GABPB1-204ENST00000396464 CLN3Q13286 438 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 MCM6Q14566 821 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 KANK3Q6NY19 840 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 LYPD4Q6UWN0 246 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 MBIPQ9NS73 344 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 USP35Q9P2H5 1018 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 ARHGEF15O94989 841 aa7.67□□□□□ -1.18
GABPB1-204ENST00000396464 GSK3AP49840 483 aa7.67□□□□□ -1.18
GABPB1-204ENST00000396464 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
GABPB1-204ENST00000396464 PRM3Q9NNZ6 103 aa7.67□□□□□ -1.18
GABPB1-204ENST00000396464 TIMMDC1Q9NPL8 285 aa7.67□□□□□ -1.18
GABPB1-204ENST00000396464 NSFL1CQ9UNZ2 370 aaKnown RBP7.67□□□□□ -1.18
GABPB1-204ENST00000396464 CELA2BP08218 269 aaPredicted RBP7.66□□□□□ -1.18
GABPB1-204ENST00000396464 GAS6Q14393 721 aa7.66□□□□□ -1.18
GABPB1-204ENST00000396464 DBN1Q16643 649 aa7.66□□□□□ -1.18
GABPB1-204ENST00000396464 NBPF10Q6P3W6 841 aaKnown RBP7.66□□□□□ -1.18
GABPB1-204ENST00000396464 NBPF15Q8N660 670 aa7.66□□□□□ -1.18
GABPB1-204ENST00000396464 SCTRP47872 440 aa7.65□□□□□ -1.18
GABPB1-204ENST00000396464 GPAT2Q6NUI2 795 aa7.65□□□□□ -1.18
GABPB1-204ENST00000396464 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
GABPB1-204ENST00000396464 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
GABPB1-204ENST00000396464 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
GABPB1-204ENST00000396464 DNMT3AQ9Y6K1 912 aaPredicted RBP7.65□□□□□ -1.18
GABPB1-204ENST00000396464 IGF1RP08069 1367 aa7.64□□□□□ -1.19
GABPB1-204ENST00000396464 WDR44Q5JSH3 913 aa7.64□□□□□ -1.19
GABPB1-204ENST00000396464 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
GABPB1-204ENST00000396464 GRIP2Q9C0E4 1043 aa7.64□□□□□ -1.19
GABPB1-204ENST00000396464 PHF20L1A8MW92 1017 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
GABPB1-204ENST00000396464 SOCS7O14512 581 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 GNRH1P01148 92 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 MX2P20592 715 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 MTMR14Q8NCE2 650 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 NUCKS1Q9H1E3 243 aaKnown RBP7.63□□□□□ -1.19
GABPB1-204ENST00000396464 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 RAB6BQ9NRW1 208 aa7.63□□□□□ -1.19
GABPB1-204ENST00000396464 F11P03951 625 aa7.62□□□□□ -1.19
GABPB1-204ENST00000396464 FOXK2Q01167 660 aa7.62□□□□□ -1.19
GABPB1-204ENST00000396464 SUZ12Q15022 739 aaKnown RBP7.62□□□□□ -1.19
GABPB1-204ENST00000396464 GNASQ5JWF2 1037 aa7.62□□□□□ -1.19
GABPB1-204ENST00000396464 CNKSR1Q969H4 720 aa7.62□□□□□ -1.19
GABPB1-204ENST00000396464 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 IGHA1P01876 353 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 BCRP11274 1271 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-204ENST00000396464 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
GABPB1-204ENST00000396464 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
GABPB1-204ENST00000396464 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-204ENST00000396464 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 GPAMQ9HCL2 828 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 SNRKQ9NRH2 765 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
GABPB1-204ENST00000396464 PHKA2P46019 1235 aa7.6□□□□□ -1.19
GABPB1-204ENST00000396464 CENPCQ03188 943 aa7.6□□□□□ -1.19
GABPB1-204ENST00000396464 SLFNL1Q499Z3 407 aa7.59□□□□□ -1.19
GABPB1-204ENST00000396464 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
GABPB1-204ENST00000396464 MAP2K3P46734 347 aa7.58□□□□□ -1.2
GABPB1-204ENST00000396464 USP4Q13107 963 aa7.58□□□□□ -1.2
GABPB1-204ENST00000396464 DOLKQ9UPQ8 538 aa7.58□□□□□ -1.2
GABPB1-204ENST00000396464 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
GABPB1-204ENST00000396464 IL2RAP01589 272 aa7.57□□□□□ -1.2
GABPB1-204ENST00000396464 FAM177A1Q8N128 213 aaPredicted RBP7.57□□□□□ -1.2
GABPB1-204ENST00000396464 ACDQ96AP0 544 aa7.57□□□□□ -1.2
GABPB1-204ENST00000396464 SIRT1Q96EB6 747 aa7.57□□□□□ -1.2
GABPB1-204ENST00000396464 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
GABPB1-204ENST00000396464 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
GABPB1-204ENST00000396464 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
GABPB1-204ENST00000396464 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
GABPB1-204ENST00000396464 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-204ENST00000396464 CFHR5Q9BXR6 569 aa7.56□□□□□ -1.2
GABPB1-204ENST00000396464 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-204ENST00000396464 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
GABPB1-204ENST00000396464 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
GABPB1-204ENST00000396464 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
GABPB1-204ENST00000396464 TBC1D2BQ9UPU7 963 aa7.55□□□□□ -1.2
GABPB1-204ENST00000396464 GPR37L1O60883 481 aa7.54□□□□□ -1.2
GABPB1-204ENST00000396464 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
GABPB1-204ENST00000396464 OIP5O43482 229 aa7.53□□□□□ -1.2
GABPB1-204ENST00000396464 LBRQ14739 615 aaKnown RBP7.53□□□□□ -1.2
GABPB1-204ENST00000396464 TLR1Q15399 786 aa7.53□□□□□ -1.2
GABPB1-204ENST00000396464 RUBCNLQ9H714 662 aa7.53□□□□□ -1.2
GABPB1-204ENST00000396464 RRAGCQ9HB90 399 aa7.53□□□□□ -1.2
GABPB1-204ENST00000396464 MSTNO14793 375 aa7.52□□□□□ -1.2
GABPB1-204ENST00000396464 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.2
GABPB1-204ENST00000396464 KCNA1Q09470 495 aa7.52□□□□□ -1.2
GABPB1-204ENST00000396464 C4orf17Q53FE4 359 aa7.52□□□□□ -1.2
GABPB1-204ENST00000396464 RHBDD1Q8TEB9 315 aa7.52□□□□□ -1.2
GABPB1-204ENST00000396464 DCAF5Q96JK2 942 aa7.52□□□□□ -1.2
GABPB1-204ENST00000396464 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
GABPB1-204ENST00000396464 BMP4P12644 408 aa7.52□□□□□ -1.21
GABPB1-204ENST00000396464 AMPD1P23109 780 aa7.52□□□□□ -1.21
GABPB1-204ENST00000396464 MSX1P28360 303 aa7.52□□□□□ -1.21
GABPB1-204ENST00000396464 GALNT6Q8NCL4 622 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms