RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 MORC1Q86VD1 984 aa30.22■■■□□ 2.43
PARD6B-202ENST00000396039 LINC00116Q8NCU8 138 aa30.22■■■□□ 2.43
PARD6B-202ENST00000396039 KNSTRNQ9Y448 316 aa30.21■■■□□ 2.43
PARD6B-202ENST00000396039 GNPATO15228 680 aa30.19■■■□□ 2.42
PARD6B-202ENST00000396039 YBX3P16989 372 aaKnown RBP eCLIP30.19■■■□□ 2.42
PARD6B-202ENST00000396039 ATG3Q9NT62 314 aa30.19■■■□□ 2.42
PARD6B-202ENST00000396039 KDRP35968 1356 aa30.18■■■□□ 2.42
PARD6B-202ENST00000396039 COL5A3P25940 1745 aaPredicted RBP30.18■■■□□ 2.42
PARD6B-202ENST00000396039 ITPK1Q13572 414 aa30.16■■■□□ 2.42
PARD6B-202ENST00000396039 AMIGO3Q86WK7 504 aa30.16■■■□□ 2.42
PARD6B-202ENST00000396039 ZNF530Q6P9A1 599 aaPredicted RBP30.15■■■□□ 2.42
PARD6B-202ENST00000396039 C1QTNF8P60827 252 aa30.14■■■□□ 2.42
PARD6B-202ENST00000396039 C1orf141Q5JVX7 400 aa30.14■■■□□ 2.42
PARD6B-202ENST00000396039 GIGYF1O75420 1035 aaPredicted RBP30.13■■■□□ 2.41
PARD6B-202ENST00000396039 RTCBQ9Y3I0 505 aaKnown RBP30.13■■■□□ 2.41
PARD6B-202ENST00000396039 ADRA2BP18089 450 aa30.12■■■□□ 2.41
PARD6B-202ENST00000396039 CABP4P57796 275 aa30.12■■■□□ 2.41
PARD6B-202ENST00000396039 KDM6AO15550 1401 aaPredicted RBP30.12■■■□□ 2.41
PARD6B-202ENST00000396039 KIF13BQ9NQT8 1826 aa30.11■■■□□ 2.41
PARD6B-202ENST00000396039 RC3H1Q5TC82 1133 aaKnown RBP30.11■■■□□ 2.41
PARD6B-202ENST00000396039 SCN11AQ9UI33 1791 aa30.1■■■□□ 2.41
PARD6B-202ENST00000396039 MTHFSP49914 203 aa30.1■■■□□ 2.41
PARD6B-202ENST00000396039 RBM42Q9BTD8 480 aaKnown RBP30.1■■■□□ 2.41
PARD6B-202ENST00000396039 CNTNAP4Q9C0A0 1308 aa30.1■■■□□ 2.41
PARD6B-202ENST00000396039 TRAPPC3LQ5T215 181 aa30.09■■■□□ 2.41
PARD6B-202ENST00000396039 CICQ96RK0 1608 aaPredicted RBP30.08■■■□□ 2.41
PARD6B-202ENST00000396039 SULT6B1Q6IMI4 303 aa30.07■■■□□ 2.4
PARD6B-202ENST00000396039 SMIM5Q71RC9 77 aa30.06■■■□□ 2.4
PARD6B-202ENST00000396039 NLGN1Q8N2Q7 840 aa30.06■■■□□ 2.4
PARD6B-202ENST00000396039 AEBP1Q8IUX7 1158 aa30.05■■■□□ 2.4
PARD6B-202ENST00000396039 C4AP0C0L4 1744 aa30.05■■■□□ 2.4
PARD6B-202ENST00000396039 VIRMAQ69YN4 1812 aaKnown RBP30.04■■■□□ 2.4
PARD6B-202ENST00000396039 IL13P35225 146 aa30.04■■■□□ 2.4
PARD6B-202ENST00000396039 AMER1Q5JTC6 1135 aaPredicted RBP30.04■■■□□ 2.4
PARD6B-202ENST00000396039 MYH14Q7Z406 1995 aaKnown RBP30.04■■■□□ 2.4
PARD6B-202ENST00000396039 SENP3-EIF4A1A0A087X0R7 540 aa30.03■■■□□ 2.4
PARD6B-202ENST00000396039 MMP10P09238 476 aa30.03■■■□□ 2.4
PARD6B-202ENST00000396039 RPS6KA4O75676 772 aa30.02■■■□□ 2.4
PARD6B-202ENST00000396039 SLC4A9Q96Q91 983 aa30.02■■■□□ 2.4
PARD6B-202ENST00000396039 ATP10DQ9P241 1426 aa30.02■■■□□ 2.4
PARD6B-202ENST00000396039 KIF7Q2M1P5 1343 aa30.01■■■□□ 2.4
PARD6B-202ENST00000396039 RFC4P35249 363 aa30.01■■■□□ 2.39
PARD6B-202ENST00000396039 TJP1Q07157 1748 aa29.99■■■□□ 2.39
PARD6B-202ENST00000396039 AKAP4Q5JQC9 854 aa29.99■■■□□ 2.39
PARD6B-202ENST00000396039 ADCY9O60503 1353 aa29.99■■■□□ 2.39
PARD6B-202ENST00000396039 TGFB2P61812 414 aa29.98■■■□□ 2.39
PARD6B-202ENST00000396039 NFATC2IPQ8NCF5 419 aa29.98■■■□□ 2.39
PARD6B-202ENST00000396039 ARHGEF1Q92888 912 aaKnown RBP29.98■■■□□ 2.39
PARD6B-202ENST00000396039 KIAA1551Q9HCM1 1747 aa29.97■■■□□ 2.39
PARD6B-202ENST00000396039 CCDC87Q9NVE4 849 aa29.97■■■□□ 2.39
PARD6B-202ENST00000396039 N4BP2Q86UW6 1770 aaPredicted RBP29.97■■■□□ 2.39
PARD6B-202ENST00000396039 C10orf71Q711Q0 1435 aa29.96■■■□□ 2.39
PARD6B-202ENST00000396039 PTCD1O75127 700 aaKnown RBP29.96■■■□□ 2.39
PARD6B-202ENST00000396039 PXDNLA1KZ92 1463 aa29.95■■■□□ 2.39
PARD6B-202ENST00000396039 GPBP1L1Q9HC44 474 aaPredicted RBP29.95■■■□□ 2.39
PARD6B-202ENST00000396039 MRC1P22897 1456 aa29.94■■■□□ 2.38
PARD6B-202ENST00000396039 GYS1P13807 737 aa29.94■■■□□ 2.38
PARD6B-202ENST00000396039 PARP3Q9Y6F1 533 aa29.94■■■□□ 2.38
PARD6B-202ENST00000396039 CRKLP46109 303 aaKnown RBP29.93■■■□□ 2.38
PARD6B-202ENST00000396039 BRCA1P38398 1863 aaKnown RBP29.92■■■□□ 2.38
PARD6B-202ENST00000396039 SLC52A2Q9HAB3 445 aa29.91■■■□□ 2.38
PARD6B-202ENST00000396039 ADAMTS7Q9UKP4 1686 aa29.91■■■□□ 2.38
PARD6B-202ENST00000396039 DIAPH1O60610 1272 aaKnown RBP29.9■■■□□ 2.38
PARD6B-202ENST00000396039 NPC1L1Q9UHC9 1359 aa29.9■■■□□ 2.38
PARD6B-202ENST00000396039 PER1O15534 1290 aaPredicted RBP29.89■■■□□ 2.38
PARD6B-202ENST00000396039 ARFGEF1Q9Y6D6 1849 aa29.88■■■□□ 2.37
PARD6B-202ENST00000396039 WWC3Q9ULE0 1092 aa29.88■■■□□ 2.37
PARD6B-202ENST00000396039 USP42Q9H9J4 1324 aaKnown RBP29.87■■■□□ 2.37
PARD6B-202ENST00000396039 HMOX1P09601 288 aa29.86■■■□□ 2.37
PARD6B-202ENST00000396039 RNMTO43148 476 aaKnown RBP29.85■■■□□ 2.37
PARD6B-202ENST00000396039 CC2D1BQ5T0F9 858 aaKnown RBP29.85■■■□□ 2.37
PARD6B-202ENST00000396039 BCS1LQ9Y276 419 aa29.84■■■□□ 2.37
PARD6B-202ENST00000396039 UBR2Q8IWV8 1755 aa29.83■■■□□ 2.37
PARD6B-202ENST00000396039 A0A0G2JLW4 131 aa29.81■■■□□ 2.36
PARD6B-202ENST00000396039 LGR6Q9HBX8 967 aa29.81■■■□□ 2.36
PARD6B-202ENST00000396039 KCPQ6ZWJ8 1503 aa29.81■■■□□ 2.36
PARD6B-202ENST00000396039 ZPR1O75312 459 aa29.8■■■□□ 2.36
PARD6B-202ENST00000396039 MTHFSDQ2M296 383 aaKnown RBP29.8■■■□□ 2.36
PARD6B-202ENST00000396039 INTS5Q6P9B9 1019 aaKnown RBP29.8■■■□□ 2.36
PARD6B-202ENST00000396039 VSIG10Q8N0Z9 540 aa29.8■■■□□ 2.36
PARD6B-202ENST00000396039 DPEP1P16444 411 aa29.79■■■□□ 2.36
PARD6B-202ENST00000396039 ZNF526Q8TF50 670 aaPredicted RBP29.79■■■□□ 2.36
PARD6B-202ENST00000396039 SRP68Q9UHB9 627 aaKnown RBP29.79■■■□□ 2.36
PARD6B-202ENST00000396039 COL3A1P02461 1466 aaPredicted RBP29.79■■■□□ 2.36
PARD6B-202ENST00000396039 FCHSD2O94868 740 aa29.78■■■□□ 2.36
PARD6B-202ENST00000396039 FKBP8Q14318 412 aa29.78■■■□□ 2.36
PARD6B-202ENST00000396039 DNAJC10Q8IXB1 793 aa29.78■■■□□ 2.36
PARD6B-202ENST00000396039 SOS1Q07889 1333 aaPredicted RBP29.77■■■□□ 2.36
PARD6B-202ENST00000396039 PIM2Q9P1W9 311 aa29.77■■■□□ 2.36
PARD6B-202ENST00000396039 CYP19A1P11511 503 aaPredicted RBP29.75■■■□□ 2.35
PARD6B-202ENST00000396039 TTC5Q8N0Z6 440 aa29.75■■■□□ 2.35
PARD6B-202ENST00000396039 GAS2L2Q8NHY3 880 aa29.75■■■□□ 2.35
PARD6B-202ENST00000396039 COL15A1P39059 1388 aa29.75■■■□□ 2.35
PARD6B-202ENST00000396039 SLC39A6Q13433 755 aa29.74■■■□□ 2.35
PARD6B-202ENST00000396039 ARHGAP27Q6ZUM4 889 aa29.74■■■□□ 2.35
PARD6B-202ENST00000396039 AFDNP55196 1824 aaKnown RBP29.73■■■□□ 2.35
PARD6B-202ENST00000396039 SIPA1L3O60292 1781 aaPredicted RBP29.73■■■□□ 2.35
PARD6B-202ENST00000396039 DDR1Q08345 913 aa29.73■■■□□ 2.35
PARD6B-202ENST00000396039 NRXN2Q9P2S2 1712 aa29.72■■■□□ 2.35
PARD6B-202ENST00000396039 U2SURPO15042 1029 aaKnown RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms