RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
ITGB1-202ENST00000396033 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 LNPKQ9C0E8 428 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 F6X3S4 739 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 FLIIQ13045 1269 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
ITGB1-202ENST00000396033 KDM3BQ7LBC6 1761 aa15.23■□□□□ 0.03
ITGB1-202ENST00000396033 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
ITGB1-202ENST00000396033 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
ITGB1-202ENST00000396033 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
ITGB1-202ENST00000396033 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
ITGB1-202ENST00000396033 ANKRD45Q5TZF3 282 aa15.23■□□□□ 0.03
ITGB1-202ENST00000396033 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 MEIS3Q99687 375 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 CRYBG1Q9Y4K1 1723 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.22■□□□□ 0.03
ITGB1-202ENST00000396033 OVOS2A0A0G2JMS6 1433 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 COL18A1P39060 1754 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 EIF4A1P60842 406 aaKnown RBP15.22■□□□□ 0.03
ITGB1-202ENST00000396033 ATP10DQ9P241 1426 aa15.22■□□□□ 0.03
ITGB1-202ENST00000396033 SEC24BO95487 1268 aa15.21■□□□□ 0.03
ITGB1-202ENST00000396033 ABCC6O95255 1503 aa15.21■□□□□ 0.02
ITGB1-202ENST00000396033 ANKRD44Q8N8A2 993 aa15.2■□□□□ 0.02
ITGB1-202ENST00000396033 CACNA1FO60840 1977 aa15.2■□□□□ 0.02
ITGB1-202ENST00000396033 KCNQ3O43525 872 aa15.2■□□□□ 0.02
ITGB1-202ENST00000396033 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
ITGB1-202ENST00000396033 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
ITGB1-202ENST00000396033 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
ITGB1-202ENST00000396033 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
ITGB1-202ENST00000396033 HOXB7P09629 217 aa15.19■□□□□ 0.02
ITGB1-202ENST00000396033 TATP17735 454 aaPredicted RBP15.19■□□□□ 0.02
ITGB1-202ENST00000396033 CPDO75976 1380 aa15.19■□□□□ 0.02
ITGB1-202ENST00000396033 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
ITGB1-202ENST00000396033 MEGF6O75095 1541 aa15.18■□□□□ 0.02
ITGB1-202ENST00000396033 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
ITGB1-202ENST00000396033 DCTPP1Q9H773 170 aa15.17■□□□□ 0.02
ITGB1-202ENST00000396033 SPG7Q9UQ90 795 aa15.16■□□□□ 0.02
ITGB1-202ENST00000396033 PHAXQ9H814 394 aaKnown RBP15.16■□□□□ 0.02
ITGB1-202ENST00000396033 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
ITGB1-202ENST00000396033 PXDNLA1KZ92 1463 aa15.16■□□□□ 0.02
ITGB1-202ENST00000396033 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
ITGB1-202ENST00000396033 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
ITGB1-202ENST00000396033 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
ITGB1-202ENST00000396033 SIPA1L3O60292 1781 aaPredicted RBP15.15■□□□□ 0.02
ITGB1-202ENST00000396033 N4BP2Q86UW6 1770 aaPredicted RBP15.15■□□□□ 0.02
ITGB1-202ENST00000396033 GNAI2P04899 355 aa15.14■□□□□ 0.01
ITGB1-202ENST00000396033 PRDM11Q9NQV5 511 aa15.14■□□□□ 0.01
ITGB1-202ENST00000396033 HMMRO75330 724 aa15.14■□□□□ 0.01
ITGB1-202ENST00000396033 GNAI3P08754 354 aa15.14■□□□□ 0.01
ITGB1-202ENST00000396033 PHKG2P15735 406 aa15.14■□□□□ 0.01
ITGB1-202ENST00000396033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.015e-9■□□□□ 11.3
ITGB1-202ENST00000396033 KDM6AO15550 1401 aaPredicted RBP15.13■□□□□ 0.01
ITGB1-202ENST00000396033 BMP2KLQ5H9B9 411 aa15.13■□□□□ 0.01
ITGB1-202ENST00000396033 IFNL2Q8IZJ0 200 aa15.12■□□□□ 0.01
ITGB1-202ENST00000396033 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
ITGB1-202ENST00000396033 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
ITGB1-202ENST00000396033 SCN11AQ9UI33 1791 aa15.12■□□□□ 0.01
ITGB1-202ENST00000396033 GIGYF1O75420 1035 aaPredicted RBP15.12■□□□□ 0.01
ITGB1-202ENST00000396033 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
ITGB1-202ENST00000396033 MFAP1P55081 439 aaKnown RBP15.12■□□□□ 0.01
ITGB1-202ENST00000396033 ANXA1P04083 346 aa15.11■□□□□ 0.01
ITGB1-202ENST00000396033 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
ITGB1-202ENST00000396033 APBB1O00213 710 aa15.11■□□□□ 0.01
ITGB1-202ENST00000396033 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
ITGB1-202ENST00000396033 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
ITGB1-202ENST00000396033 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
ITGB1-202ENST00000396033 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
ITGB1-202ENST00000396033 SRCIN1Q9C0H9 1055 aa15.1■□□□□ 0.01
ITGB1-202ENST00000396033 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
ITGB1-202ENST00000396033 PRAMEF22A3QJZ6 481 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 UBTFL1P0CB47 393 aaPredicted RBP15.09■□□□□ 0.01
ITGB1-202ENST00000396033 TOM1L2Q6ZVM7 507 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 DNAAF4Q8WXU2 420 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 NHSL1Q5SYE7 1610 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 CYP27B1O15528 508 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 SLC39A6Q13433 755 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
ITGB1-202ENST00000396033 LRRFIP2Q9Y608 721 aaKnown RBP15.09■□□□□ 0.01
ITGB1-202ENST00000396033 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0.01
ITGB1-202ENST00000396033 NFATC2IPQ8NCF5 419 aa15.08■□□□□ 0.01
ITGB1-202ENST00000396033 DCAF5Q96JK2 942 aa15.08■□□□□ 0.01
ITGB1-202ENST00000396033 USP44Q9H0E7 712 aa15.08■□□□□ 0.01
ITGB1-202ENST00000396033 COL5A2P05997 1499 aaPredicted RBP15.08■□□□□ 0
ITGB1-202ENST00000396033 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
ITGB1-202ENST00000396033 PROSER3Q2NL68 480 aa15.07■□□□□ 0
ITGB1-202ENST00000396033 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
ITGB1-202ENST00000396033 MRC1P22897 1456 aa15.07■□□□□ 0
ITGB1-202ENST00000396033 ADCY9O60503 1353 aa15.07■□□□□ 0
ITGB1-202ENST00000396033 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
ITGB1-202ENST00000396033 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
ITGB1-202ENST00000396033 BRPF3Q9ULD4 1205 aa15.07■□□□□ 0
ITGB1-202ENST00000396033 ATP8B2P98198 1209 aa15.06■□□□□ 0
ITGB1-202ENST00000396033 BEND3Q5T5X7 828 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms