RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 SF3A1Q15459 793 aaKnown RBP21.39■■□□□ 1.01
SNTB1-201ENST00000395601 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.01
SNTB1-201ENST00000395601 PIK3R4Q99570 1358 aa21.39■■□□□ 1.01
SNTB1-201ENST00000395601 ATP5J2-PTCD1G3V325 749 aa21.39■■□□□ 1.01
SNTB1-201ENST00000395601 MAP3K5Q99683 1374 aa21.39■■□□□ 1.01
SNTB1-201ENST00000395601 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
SNTB1-201ENST00000395601 MYOM2P54296 1465 aa21.38■■□□□ 1.01
SNTB1-201ENST00000395601 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
SNTB1-201ENST00000395601 GOLGA6L6A8MZA4 724 aa21.38■■□□□ 1.01
SNTB1-201ENST00000395601 RPGRQ92834 1020 aaKnown RBP21.38■■□□□ 1.01
SNTB1-201ENST00000395601 ANKRD13DQ6ZTN6 518 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 TSHZ2Q9NRE2 1034 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 TET3O43151 1660 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 TRIM29Q14134 588 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 CWC25Q9NXE8 425 aaPredicted RBP21.37■■□□□ 1.01
SNTB1-201ENST00000395601 USP21Q9UK80 565 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 CHPF2Q9P2E5 772 aa21.37■■□□□ 1.01
SNTB1-201ENST00000395601 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
SNTB1-201ENST00000395601 PPP1R42Q7Z4L9 355 aa21.36■■□□□ 1.01
SNTB1-201ENST00000395601 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
SNTB1-201ENST00000395601 TRIM27P14373 513 aa21.36■■□□□ 1.01
SNTB1-201ENST00000395601 IL13P35225 146 aa21.35■■□□□ 1.01
SNTB1-201ENST00000395601 MCTP1Q6DN14 999 aa21.35■■□□□ 1.01
SNTB1-201ENST00000395601 RSPH6AQ9H0K4 717 aa21.35■■□□□ 1.01
SNTB1-201ENST00000395601 LRRFIP2Q9Y608 721 aaKnown RBP21.35■■□□□ 1.01
SNTB1-201ENST00000395601 C22orf23Q9BZE7 217 aa21.35■■□□□ 1.01
SNTB1-201ENST00000395601 RNMTO43148 476 aaKnown RBP21.35■■□□□ 1.01
SNTB1-201ENST00000395601 RBM5P52756 815 aaKnown RBP eCLIP21.35■■□□□ 1.013e-6■□□□□ 11
SNTB1-201ENST00000395601 FAM98CQ17RN3 349 aaKnown RBP21.35■■□□□ 1.01
SNTB1-201ENST00000395601 AKAP2Q9Y2D5 859 aa21.35■■□□□ 1.01
SNTB1-201ENST00000395601 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
SNTB1-201ENST00000395601 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 XAGE3Q8WTP9 111 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 KIF1BPQ96EK5 621 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 SBNO2Q9Y2G9 1366 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
SNTB1-201ENST00000395601 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
SNTB1-201ENST00000395601 ANKIB1Q9P2G1 1089 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 COPS6Q7L5N1 327 aa21.34■■□□□ 1.01
SNTB1-201ENST00000395601 IFIT1P09914 478 aaKnown RBP21.33■■□□□ 1.01
SNTB1-201ENST00000395601 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1.01
SNTB1-201ENST00000395601 KIF1BO60333 1816 aa21.33■■□□□ 1.01
SNTB1-201ENST00000395601 SYAP1Q96A49 352 aaPredicted RBP21.33■■□□□ 1
SNTB1-201ENST00000395601 PSMA5P28066 241 aa21.33■■□□□ 1
SNTB1-201ENST00000395601 UBE3BQ7Z3V4 1068 aa21.33■■□□□ 1
SNTB1-201ENST00000395601 RAI14Q9P0K7 980 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 KDM5CP41229 1560 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 C8orf58Q8NAV2 365 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 NBPF5PQ86XG9 351 aaPredicted RBP21.32■■□□□ 1
SNTB1-201ENST00000395601 NBPF4Q96M43 638 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 LRP2BPQ9P2M1 347 aa21.32■■□□□ 1
SNTB1-201ENST00000395601 C20orf194Q5TEA3 1177 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 RAB11FIP3O75154 756 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 SART3Q15020 963 aaKnown RBP21.31■■□□□ 1
SNTB1-201ENST00000395601 NACAP1Q9BZK3 213 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 NRDCO43847 1150 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 CHAF1AQ13111 956 aaPredicted RBP21.31■■□□□ 1
SNTB1-201ENST00000395601 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 NUTM1Q86Y26 1132 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 MTMR7Q9Y216 660 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 ATP6V1DQ9Y5K8 247 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 A2ML1A8K2U0 1454 aa21.31■■□□□ 1
SNTB1-201ENST00000395601 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
SNTB1-201ENST00000395601 KAT6BQ8WYB5 2073 aa21.3■■□□□ 1
SNTB1-201ENST00000395601 SLC4A3P48751 1232 aa21.3■■□□□ 1
SNTB1-201ENST00000395601 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
SNTB1-201ENST00000395601 RRP12Q5JTH9 1297 aaKnown RBP21.3■■□□□ 1
SNTB1-201ENST00000395601 ABCF2Q9UG63 623 aa21.3■■□□□ 1
SNTB1-201ENST00000395601 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
SNTB1-201ENST00000395601 CWC22Q9HCG8 908 aaKnown RBP21.29■■□□□ 1
SNTB1-201ENST00000395601 IQGAP3Q86VI3 1631 aa21.29■■□□□ 1
SNTB1-201ENST00000395601 IDH1O75874 414 aaKnown RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 FOXD4L6Q3SYB3 417 aaPredicted RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 FOXD4L3Q6VB84 417 aaPredicted RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 DDX46Q7L014 1031 aaKnown RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 SETDB2Q96T68 719 aa21.28■■□□□ 1
SNTB1-201ENST00000395601 CDC5LQ99459 802 aaKnown RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 RTCBQ9Y3I0 505 aaKnown RBP21.28■■□□□ 1
SNTB1-201ENST00000395601 TFCP2L1Q9NZI6 479 aa21.28■■□□□ 1
SNTB1-201ENST00000395601 ST5P78524 1137 aa21.27■■□□□ 1
SNTB1-201ENST00000395601 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
SNTB1-201ENST00000395601 GZF1Q9H116 711 aaPredicted RBP21.26■□□□□ 0.99
SNTB1-201ENST00000395601 FAM135BQ49AJ0 1406 aa21.26■□□□□ 0.99
SNTB1-201ENST00000395601 IKQ13123 557 aaPredicted RBP21.26■□□□□ 0.99
SNTB1-201ENST00000395601 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
SNTB1-201ENST00000395601 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
SNTB1-201ENST00000395601 LDHAL6AQ6ZMR3 332 aa21.26■□□□□ 0.99
SNTB1-201ENST00000395601 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
SNTB1-201ENST00000395601 ZNF622Q969S3 477 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNTB1-201ENST00000395601 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
SNTB1-201ENST00000395601 TCEAL9Q9UHQ7 104 aa21.25■□□□□ 0.99
SNTB1-201ENST00000395601 SLC5A1P13866 664 aa21.25■□□□□ 0.99
SNTB1-201ENST00000395601 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
SNTB1-201ENST00000395601 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNTB1-201ENST00000395601 ARHGAP45Q92619 1136 aa21.24■□□□□ 0.99
SNTB1-201ENST00000395601 SMARCA5O60264 1052 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms