RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 KRT32Q14532 448 aa18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 TFIP11Q9UBB9 837 aaKnown RBP18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 CCDC171Q6TFL3 1326 aa18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.51
SPOCK1-202ENST00000394945 TXLNAP40222 546 aa18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 SART3Q15020 963 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 OGFRQ9NZT2 677 aa18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 V9GYY5 206 aaPredicted RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 NUTM1Q86Y26 1132 aa18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 DNAAF4Q8WXU2 420 aa18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 LUC7LQ9NQ29 371 aaKnown RBP18.2■□□□□ 0.5
SPOCK1-202ENST00000394945 TERF1P54274 439 aa18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 TMC6Q7Z403 805 aa18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
SPOCK1-202ENST00000394945 GPRASP1Q5JY77 1395 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 FCHSD2O94868 740 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 CAVIN2O95810 425 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 TAX1BP1Q86VP1 789 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 SKILP12757 684 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 KIAA1328Q86T90 577 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
SPOCK1-202ENST00000394945 HDAC1Q13547 482 aaPredicted RBP18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 ARFGAP3Q9NP61 516 aa18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 AACSQ86V21 672 aa18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 FAM200AQ8TCP9 573 aa18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 RAB11FIP3O75154 756 aa18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 RNF187Q5TA31 235 aaPredicted RBP18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
SPOCK1-202ENST00000394945 SLU7O95391 586 aaKnown RBP18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 MCM3P25205 808 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 POTEB2H3BUK9 544 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 STIM1Q13586 685 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 SIL1Q9H173 461 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 ZSWIM4Q9H7M6 989 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 STX1AQ16623 288 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 USP48Q86UV5 1035 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 AMOTL1Q8IY63 956 aa18.16■□□□□ 0.5
SPOCK1-202ENST00000394945 GNG11P61952 73 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 TRIM22Q8IYM9 498 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 INCENPQ9NQS7 918 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 IVLP07476 585 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 NUCB1Q02818 461 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 DYDC1Q8WWB3 177 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 GJB2P29033 226 aa18.15■□□□□ 0.5
SPOCK1-202ENST00000394945 C9orf84Q5VXU9 1444 aa18.14■□□□□ 0.5
SPOCK1-202ENST00000394945 MICALCLQ6ZW33 695 aa18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 RBSNQ9H1K0 784 aa18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 RSPH14Q9UHP6 348 aa18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 RAI14Q9P0K7 980 aa18.14■□□□□ 0.49
SPOCK1-202ENST00000394945 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 FSIP1Q8NA03 581 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 PRM3Q9NNZ6 103 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 GOLGA6L9A6NEM1 432 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 ZRSR2Q15696 482 aaKnown RBP18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 DNAI1Q9UI46 699 aa18.13■□□□□ 0.49
SPOCK1-202ENST00000394945 EIF5P55010 431 aaKnown RBP18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 C10orf67Q8IYJ2 551 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 CCDC150Q8NCX0 1101 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 CNPY2Q9Y2B0 182 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 MCM6Q14566 821 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 ZFYVE27Q5T4F4 411 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 BIN1O00499 593 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 CTR9Q6PD62 1173 aa18.12■□□□□ 0.49
SPOCK1-202ENST00000394945 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 NEFHP12036 1026 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 ANO6Q4KMQ2 910 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 ENOX2Q16206 610 aaKnown RBP18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 RASSF4Q9H2L5 321 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
SPOCK1-202ENST00000394945 RAD21O60216 631 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 CAPN2P17655 700 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms