RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
CTSC-202ENST00000393301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
CTSC-202ENST00000393301 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
CTSC-202ENST00000393301 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
CTSC-202ENST00000393301 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
CTSC-202ENST00000393301 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
CTSC-202ENST00000393301 GRIN3BO60391 1043 aa16.89■□□□□ 0.29
CTSC-202ENST00000393301 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
CTSC-202ENST00000393301 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
CTSC-202ENST00000393301 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
CTSC-202ENST00000393301 MRC1P22897 1456 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 MSH5O43196 834 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
CTSC-202ENST00000393301 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
CTSC-202ENST00000393301 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
CTSC-202ENST00000393301 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■□□□□ 10.4
CTSC-202ENST00000393301 IL13P35225 146 aa16.87■□□□□ 0.29
CTSC-202ENST00000393301 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
CTSC-202ENST00000393301 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
CTSC-202ENST00000393301 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
CTSC-202ENST00000393301 ADRA2BP18089 450 aa16.86■□□□□ 0.29
CTSC-202ENST00000393301 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
CTSC-202ENST00000393301 TJP1Q07157 1748 aa16.85■□□□□ 0.29
CTSC-202ENST00000393301 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
CTSC-202ENST00000393301 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
CTSC-202ENST00000393301 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
CTSC-202ENST00000393301 ADCY9O60503 1353 aa16.85■□□□□ 0.29
CTSC-202ENST00000393301 GNPATO15228 680 aa16.84■□□□□ 0.29
CTSC-202ENST00000393301 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.28
CTSC-202ENST00000393301 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
CTSC-202ENST00000393301 C10orf71Q711Q0 1435 aa16.82■□□□□ 0.28
CTSC-202ENST00000393301 PHF14O94880 888 aa16.82■□□□□ 0.28
CTSC-202ENST00000393301 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
CTSC-202ENST00000393301 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
CTSC-202ENST00000393301 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
CTSC-202ENST00000393301 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
CTSC-202ENST00000393301 UBR2Q8IWV8 1755 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 MTHFSP49914 203 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 CABP4P57796 275 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
CTSC-202ENST00000393301 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
CTSC-202ENST00000393301 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
CTSC-202ENST00000393301 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
CTSC-202ENST00000393301 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
CTSC-202ENST00000393301 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
CTSC-202ENST00000393301 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.28
CTSC-202ENST00000393301 MMP10P09238 476 aa16.77■□□□□ 0.28
CTSC-202ENST00000393301 GYS1P13807 737 aa16.77■□□□□ 0.28
CTSC-202ENST00000393301 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
CTSC-202ENST00000393301 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
CTSC-202ENST00000393301 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.27
CTSC-202ENST00000393301 TGFB2P61812 414 aa16.76■□□□□ 0.27
CTSC-202ENST00000393301 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
CTSC-202ENST00000393301 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
CTSC-202ENST00000393301 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
CTSC-202ENST00000393301 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
CTSC-202ENST00000393301 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
CTSC-202ENST00000393301 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
CTSC-202ENST00000393301 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
CTSC-202ENST00000393301 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
CTSC-202ENST00000393301 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
CTSC-202ENST00000393301 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
CTSC-202ENST00000393301 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
CTSC-202ENST00000393301 RFC4P35249 363 aa16.72■□□□□ 0.27
CTSC-202ENST00000393301 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.27
CTSC-202ENST00000393301 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
CTSC-202ENST00000393301 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
CTSC-202ENST00000393301 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
CTSC-202ENST00000393301 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
CTSC-202ENST00000393301 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
CTSC-202ENST00000393301 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
CTSC-202ENST00000393301 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
CTSC-202ENST00000393301 HMOX1P09601 288 aa16.68■□□□□ 0.26
CTSC-202ENST00000393301 CYP19A1P11511 503 aaPredicted RBP16.68■□□□□ 0.26
CTSC-202ENST00000393301 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
CTSC-202ENST00000393301 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
CTSC-202ENST00000393301 DLEC1Q9Y238 1755 aa16.68■□□□□ 0.26
CTSC-202ENST00000393301 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
CTSC-202ENST00000393301 KCNA3P22001 575 aa16.67■□□□□ 0.26
CTSC-202ENST00000393301 TM4SF1P30408 202 aa16.67■□□□□ 0.26
CTSC-202ENST00000393301 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
CTSC-202ENST00000393301 DDR1Q08345 913 aa16.66■□□□□ 0.26
CTSC-202ENST00000393301 FKBP8Q14318 412 aa16.66■□□□□ 0.26
CTSC-202ENST00000393301 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
CTSC-202ENST00000393301 COL15A1P39059 1388 aa16.65■□□□□ 0.26
CTSC-202ENST00000393301 SENP3-EIF4A1A0A087X0R7 540 aa16.65■□□□□ 0.26
CTSC-202ENST00000393301 POLRMTO00411 1230 aaKnown RBP16.65■□□□□ 0.26
CTSC-202ENST00000393301 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
CTSC-202ENST00000393301 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
CTSC-202ENST00000393301 DPEP1P16444 411 aa16.64■□□□□ 0.25
CTSC-202ENST00000393301 GPBP1L1Q9HC44 474 aaPredicted RBP16.64■□□□□ 0.25
CTSC-202ENST00000393301 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
CTSC-202ENST00000393301 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
CTSC-202ENST00000393301 SLC39A6Q13433 755 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 464.2 ms