RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 CLN3Q13286 438 aa8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 SCARF1Q14162 830 aa8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 MRPL14Q6P1L8 145 aaKnown RBP8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 CNKSR1Q969H4 720 aa8.22□□□□□ -1.09
SNORA40.2-201ENST00000390847 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 IL2RAP01589 272 aa8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 TLR1Q15399 786 aa8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 INSM2Q96T92 566 aaPredicted RBP8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 ESYT1Q9BSJ8 1104 aa8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
SNORA40.2-201ENST00000390847 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
SNORA40.2-201ENST00000390847 LGR5O75473 907 aa8.2□□□□□ -1.1
SNORA40.2-201ENST00000390847 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
SNORA40.2-201ENST00000390847 XAGE2Q96GT9 111 aa8.2□□□□□ -1.1
SNORA40.2-201ENST00000390847 PURBQ96QR8 312 aaKnown RBP8.2□□□□□ -1.1
SNORA40.2-201ENST00000390847 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
SNORA40.2-201ENST00000390847 M0R2N6 131 aa8.19□□□□□ -1.1
SNORA40.2-201ENST00000390847 SWI5Q1ZZU3 235 aa8.19□□□□□ -1.1
SNORA40.2-201ENST00000390847 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
SNORA40.2-201ENST00000390847 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
SNORA40.2-201ENST00000390847 SPINT1O43278 529 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 SMTNP53814 917 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 CENPCQ03188 943 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 Q6ZNB5 142 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
SNORA40.2-201ENST00000390847 A6NJY4 79 aa8.17□□□□□ -1.1
SNORA40.2-201ENST00000390847 PRMT3O60678 531 aa8.17□□□□□ -1.1
SNORA40.2-201ENST00000390847 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
SNORA40.2-201ENST00000390847 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
SNORA40.2-201ENST00000390847 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
SNORA40.2-201ENST00000390847 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
SNORA40.2-201ENST00000390847 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
SNORA40.2-201ENST00000390847 PRIMPOLQ96LW4 560 aa8.16□□□□□ -1.1
SNORA40.2-201ENST00000390847 TBCELQ5QJ74 424 aa8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 ZFP42Q96MM3 310 aa8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 TSPAN10Q9H1Z9 355 aaPredicted RBP8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
SNORA40.2-201ENST00000390847 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 ATP2B4P23634 1241 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 GPC1P35052 558 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 RNF144AP50876 292 aaPredicted RBP8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 B4GALNT3Q6L9W6 998 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 SLC9A9Q8IVB4 645 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 NBPF15Q8N660 670 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 SCG3Q8WXD2 468 aaKnown RBP8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 FHDC1Q9C0D6 1143 aaPredicted RBP8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 DACH1Q9UI36 760 aa8.14□□□□□ -1.11
SNORA40.2-201ENST00000390847 FIGNL2A6NMB9 653 aa8.13□□□□□ -1.11
SNORA40.2-201ENST00000390847 EPHA4P54764 986 aa8.13□□□□□ -1.11
SNORA40.2-201ENST00000390847 MTFR1Q15390 333 aa8.13□□□□□ -1.11
SNORA40.2-201ENST00000390847 GNASQ5JWF2 1037 aa8.13□□□□□ -1.11
SNORA40.2-201ENST00000390847 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
SNORA40.2-201ENST00000390847 CDK2AP1O14519 115 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 PPP1R12BO60237 982 aaPredicted RBP8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 FOXK2Q01167 660 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 GAS2L2Q8NHY3 880 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 CABP1Q9NZU7 370 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 CHMP3Q9Y3E7 222 aa8.12□□□□□ -1.11
SNORA40.2-201ENST00000390847 ATAD2Q6PL18 1390 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 SOS2Q07890 1332 aaPredicted RBP8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 MAN1A2O60476 641 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 WEE1P30291 646 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 LYSMD3Q7Z3D4 306 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 PPARGC1BQ86YN6 1023 aaKnown RBP8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
SNORA40.2-201ENST00000390847 IGFBP4P22692 258 aa8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 OCLNQ16625 522 aa8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 NIFKQ9BYG3 293 aaKnown RBP8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
SNORA40.2-201ENST00000390847 C21orf2O43822 256 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 BRD1O95696 1058 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 SSFA2P28290 1259 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 PHKA2P46019 1235 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 PSMA6P60900 246 aaKnown RBP8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 POU4F2Q12837 409 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 MKNK1Q9BUB5 465 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 PARP3Q9Y6F1 533 aa8.09□□□□□ -1.11
SNORA40.2-201ENST00000390847 SERTM1A2A2V5 107 aa8.08□□□□□ -1.12
SNORA40.2-201ENST00000390847 RHOQP17081 205 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms