RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CDC14CA4D256 554 aa5.85□□□□□ -1.47
SMC6-202ENST00000381272 WASLO00401 505 aaPredicted RBP5.85□□□□□ -1.47
SMC6-202ENST00000381272 STAU1O95793 577 aaKnown RBP5.85□□□□□ -1.47
SMC6-202ENST00000381272 INHAP05111 366 aa5.85□□□□□ -1.47
SMC6-202ENST00000381272 GDF10P55107 478 aa5.85□□□□□ -1.47
SMC6-202ENST00000381272 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
SMC6-202ENST00000381272 VWA5B2Q8N398 1253 aa5.85□□□□□ -1.47
SMC6-202ENST00000381272 GLMNQ92990 594 aa5.85□□□□□ -1.47
SMC6-202ENST00000381272 SCNN1DP51172 638 aa5.84□□□□□ -1.47
SMC6-202ENST00000381272 TLR1Q15399 786 aa5.84□□□□□ -1.47
SMC6-202ENST00000381272 GNASQ5JWF2 1037 aa5.84□□□□□ -1.47
SMC6-202ENST00000381272 SV2AQ7L0J3 742 aa5.84□□□□□ -1.47
SMC6-202ENST00000381272 DEPDC4Q8N2C3 294 aa5.84□□□□□ -1.47
SMC6-202ENST00000381272 FHDC1Q9C0D6 1143 aaPredicted RBP5.84□□□□□ -1.47
SMC6-202ENST00000381272 RIPOR1Q6ZS17 1223 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 TBC1D9Q6ZT07 1266 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 GMCL1Q96IK5 515 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 GAS2L1Q99501 681 aaPredicted RBP5.83□□□□□ -1.48
SMC6-202ENST00000381272 TIMMDC1Q9NPL8 285 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 PCDHGA11Q9Y5H2 935 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 ATP9BO43861 1147 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 GTF2IP78347 998 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 PSME1Q06323 249 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 TRIM50Q86XT4 487 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 PLEKHM2Q8IWE5 1019 aa5.83□□□□□ -1.48
SMC6-202ENST00000381272 GPR161Q8N6U8 529 aaKnown RBP5.83□□□□□ -1.48
SMC6-202ENST00000381272 USP17L3A6NCW0 530 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 USP17L4A6NCW7 530 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 H7C1W4 665 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 USP17L2Q6R6M4 530 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 USP17L1Q7RTZ2 530 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 RHBDD1Q8TEB9 315 aa5.82□□□□□ -1.48
SMC6-202ENST00000381272 CALR3Q96L12 384 aaKnown RBP5.82□□□□□ -1.48
SMC6-202ENST00000381272 TMEM229AB2RXF0 380 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 F11P03951 625 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 PHKA2P46019 1235 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 SMTNP53814 917 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 TRIM22Q8IYM9 498 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 COL25A1Q9BXS0 654 aaPredicted RBP5.81□□□□□ -1.48
SMC6-202ENST00000381272 CUEDC1Q9NWM3 386 aaPredicted RBP5.81□□□□□ -1.48
SMC6-202ENST00000381272 SERTAD1Q9UHV2 236 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 A0A1B0GTH6 734 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 BACH1O14867 736 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 ATP1A2P50993 1020 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 C4orf17Q53FE4 359 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 FOXR1Q6PIV2 292 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 ZSCAN1Q8NBB4 408 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 SLC4A9Q96Q91 983 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 STK17AQ9UEE5 414 aa5.81□□□□□ -1.48
SMC6-202ENST00000381272 DBN1Q16643 649 aa5.8□□□□□ -1.48
SMC6-202ENST00000381272 ZNF837Q96EG3 531 aaPredicted RBP5.8□□□□□ -1.48
SMC6-202ENST00000381272 TFIP11Q9UBB9 837 aaKnown RBP5.8□□□□□ -1.48
SMC6-202ENST00000381272 FAM181BA6NEQ2 426 aa5.79□□□□□ -1.48
SMC6-202ENST00000381272 A6NJY4 79 aa5.79□□□□□ -1.48
SMC6-202ENST00000381272 CNTNAP3BQ96NU0 1288 aa5.79□□□□□ -1.48
SMC6-202ENST00000381272 NIFKQ9BYG3 293 aaKnown RBP5.79□□□□□ -1.48
SMC6-202ENST00000381272 CNTNAP3Q9BZ76 1288 aa5.79□□□□□ -1.48
SMC6-202ENST00000381272 MKRN1Q9UHC7 482 aaKnown RBP5.79□□□□□ -1.48
SMC6-202ENST00000381272 CDK2AP1O14519 115 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 KRT76Q01546 638 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 MTFR1Q15390 333 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC6-202ENST00000381272 GPAMQ9HCL2 828 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 MAFBQ9Y5Q3 323 aaPredicted RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 BAZ1AQ9NRL2 1556 aaPredicted RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 PALM3A6NDB9 673 aaPredicted RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 CSB-PGBD3P0DP91 1061 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 RNFT1Q5M7Z0 435 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 PGBD3Q8N328 593 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 LARGE2Q8N3Y3 721 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 OGFOD1Q8N543 542 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 TPCN2Q8NHX9 752 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 PPP1R12CQ9BZL4 782 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 NUCKS1Q9H1E3 243 aaKnown RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 DNAAF2Q9NVR5 837 aaKnown RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 ZNF358Q9NW07 568 aa5.78□□□□□ -1.48
SMC6-202ENST00000381272 ZNF777Q9ULD5 760 aaPredicted RBP5.78□□□□□ -1.48
SMC6-202ENST00000381272 UNC13AQ9UPW8 1703 aa5.77□□□□□ -1.49
SMC6-202ENST00000381272 ZBTB7BO15156 539 aaPredicted RBP5.77□□□□□ -1.49
SMC6-202ENST00000381272 PLA2G4AP47712 749 aa5.77□□□□□ -1.49
SMC6-202ENST00000381272 CLDN10P78369 228 aa5.77□□□□□ -1.49
SMC6-202ENST00000381272 CCDC102BQ68D86 513 aa5.77□□□□□ -1.49
SMC6-202ENST00000381272 GTPBP3Q969Y2 492 aaKnown RBP5.77□□□□□ -1.49
SMC6-202ENST00000381272 TRERF1Q96PN7 1200 aa5.77□□□□□ -1.49
SMC6-202ENST00000381272 IQSEC3Q9UPP2 1182 aaPredicted RBP5.77□□□□□ -1.49
SMC6-202ENST00000381272 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.49
SMC6-202ENST00000381272 MSX1P28360 303 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 C1orf216Q8TAB5 229 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 AIDAQ96BJ3 306 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 SCHIP1Q9P0W5 487 aaPredicted RBP5.76□□□□□ -1.49
SMC6-202ENST00000381272 GTF3C3Q9Y5Q9 886 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 GPR25O00155 361 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 LBRQ14739 615 aaKnown RBP5.76□□□□□ -1.49
SMC6-202ENST00000381272 NBPF1Q3BBV0 1214 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 ZNF594Q96JF6 807 aaPredicted RBP5.76□□□□□ -1.49
SMC6-202ENST00000381272 RUBCNLQ9H714 662 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 CABP1Q9NZU7 370 aa5.76□□□□□ -1.49
SMC6-202ENST00000381272 KIAA1024Q9UPX6 916 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms