RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 SLC27A3Q5K4L6 730 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 IFNL2Q8IZJ0 200 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 AK7Q96M32 723 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 RTL1A6NKG5 1358 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 PER1O15534 1290 aaPredicted RBP6.36□□□□□ -1.39
C9orf72-203ENST00000380003 ZNF330Q9Y3S2 320 aaPredicted RBP6.35□□□□□ -1.39
C9orf72-203ENST00000380003 PIP4K2AP48426 406 aaPredicted RBP6.35□□□□□ -1.39
C9orf72-203ENST00000380003 USP54Q70EL1 1684 aa6.35□□□□□ -1.39
C9orf72-203ENST00000380003 POLD1P28340 1107 aa6.35□□□□□ -1.39
C9orf72-203ENST00000380003 IL13P35225 146 aa6.35□□□□□ -1.39
C9orf72-203ENST00000380003 CABP4P57796 275 aa6.35□□□□□ -1.39
C9orf72-203ENST00000380003 ZNF784Q8NCA9 323 aaPredicted RBP6.35□□□□□ -1.39
C9orf72-203ENST00000380003 CASZ1Q86V15 1759 aa6.34□□□□□ -1.39
C9orf72-203ENST00000380003 IGSF1Q8N6C5 1336 aa6.34□□□□□ -1.39
C9orf72-203ENST00000380003 SRP68Q9UHB9 627 aaKnown RBP6.34□□□□□ -1.39
C9orf72-203ENST00000380003 TOGARAM1Q9Y4F4 1720 aa6.34□□□□□ -1.39
C9orf72-203ENST00000380003 CAPN15O75808 1086 aa6.34□□□□□ -1.39
C9orf72-203ENST00000380003 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
C9orf72-203ENST00000380003 CCDC24Q8N4L8 307 aa6.34□□□□□ -1.39
C9orf72-203ENST00000380003 C1orf141Q5JVX7 400 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 PHACTR3Q96KR7 559 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
C9orf72-203ENST00000380003 A0A0G2JLW4 131 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 MMP10P09238 476 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 PLEKHO1Q53GL0 409 aaPredicted RBP6.33□□□□□ -1.4
C9orf72-203ENST00000380003 ARHGEF1Q92888 912 aaKnown RBP6.33□□□□□ -1.4
C9orf72-203ENST00000380003 ZNF428Q96B54 188 aa6.33□□□□□ -1.4
C9orf72-203ENST00000380003 PAPPAQ13219 1627 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 NKX1-1Q15270 411 aaPredicted RBP6.32□□□□□ -1.4
C9orf72-203ENST00000380003 MIS18AQ9NYP9 233 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 TUBGCP6Q96RT7 1819 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 PRAMEF22A3QJZ6 481 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 KCNQ3O43525 872 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 DNAJC10Q8IXB1 793 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 ITGB4P16144 1822 aa6.32□□□□□ -1.4
C9orf72-203ENST00000380003 DIAPH1O60610 1272 aaKnown RBP6.31□□□□□ -1.4
C9orf72-203ENST00000380003 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
C9orf72-203ENST00000380003 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
C9orf72-203ENST00000380003 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
C9orf72-203ENST00000380003 FKBP8Q14318 412 aa6.31□□□□□ -1.4
C9orf72-203ENST00000380003 TRAPPC3LQ5T215 181 aa6.31□□□□□ -1.4
C9orf72-203ENST00000380003 MCM10Q7L590 875 aa6.31□□□□□ -1.4
C9orf72-203ENST00000380003 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
C9orf72-203ENST00000380003 RFC4P35249 363 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 SMARCC1Q92922 1105 aaPredicted RBP6.3□□□□□ -1.4
C9orf72-203ENST00000380003 CENPFP49454 3210 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 KIF24Q5T7B8 1368 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
C9orf72-203ENST00000380003 PRKAR2BP31323 418 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
C9orf72-203ENST00000380003 SLC16A10Q8TF71 515 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 THUMPD2Q9BTF0 503 aaKnown RBP6.3□□□□□ -1.4
C9orf72-203ENST00000380003 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 LY75O60449 1722 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 RGPD3A6NKT7 1758 aaPredicted RBP6.3□□□□□ -1.4
C9orf72-203ENST00000380003 RGPD4Q7Z3J3 1758 aa6.3□□□□□ -1.4
C9orf72-203ENST00000380003 CHRNA5P30532 468 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 DDX10Q13206 875 aaKnown RBP6.29□□□□□ -1.4
C9orf72-203ENST00000380003 IL17REQ8NFR9 667 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.29□□□□□ -1.42e-6■■■□□ 15.8
C9orf72-203ENST00000380003 GYS1P13807 737 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 ZNF219Q9P2Y4 722 aaPredicted RBP6.29□□□□□ -1.4
C9orf72-203ENST00000380003 ZBTB1Q9Y2K1 713 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 C5P01031 1676 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 C4BP0C0L5 1744 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 ERVV-2B6SEH9 535 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 AMOTQ4VCS5 1084 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 SLC52A2Q9HAB3 445 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 TBC1D2BQ9UPU7 963 aa6.29□□□□□ -1.4
C9orf72-203ENST00000380003 NCAPD2Q15021 1401 aa6.28□□□□□ -1.4
C9orf72-203ENST00000380003 RNMTO43148 476 aaKnown RBP6.28□□□□□ -1.4
C9orf72-203ENST00000380003 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
C9orf72-203ENST00000380003 NGEFQ8N5V2 710 aa6.28□□□□□ -1.4
C9orf72-203ENST00000380003 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
C9orf72-203ENST00000380003 MYH14Q7Z406 1995 aaKnown RBP6.28□□□□□ -1.4
C9orf72-203ENST00000380003 FAM177BA6PVY3 158 aa6.28□□□□□ -1.4
C9orf72-203ENST00000380003 A1BGP04217 495 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 DPEP1P16444 411 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 SSFA2P28290 1259 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 PPP2R1AP30153 589 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 DDR1Q08345 913 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 NEUROD2Q15784 382 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 AKAP4Q5JQC9 854 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 PKD1L3Q7Z443 1732 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 TAF1LQ8IZX4 1826 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 KDRP35968 1356 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 TEFQ10587 303 aa6.27□□□□□ -1.41
C9orf72-203ENST00000380003 RRP7AQ9Y3A4 280 aaKnown RBP6.27□□□□□ -1.41
C9orf72-203ENST00000380003 U3KPZ7 1027 aaPredicted RBP6.27□□□□□ -1.41
C9orf72-203ENST00000380003 BRCA2P51587 3418 aa6.26□□□□□ -1.41
C9orf72-203ENST00000380003 HSP90AB1P08238 724 aaKnown RBP6.26□□□□□ -1.41
C9orf72-203ENST00000380003 ARHGAP27Q6ZUM4 889 aa6.26□□□□□ -1.41
C9orf72-203ENST00000380003 USP16Q9Y5T5 823 aa6.26□□□□□ -1.41
C9orf72-203ENST00000380003 RPS6KA4O75676 772 aa6.26□□□□□ -1.41
C9orf72-203ENST00000380003 CYP19A1P11511 503 aaPredicted RBP6.26□□□□□ -1.41
C9orf72-203ENST00000380003 UBR3Q6ZT12 1888 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms