RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 NUCB1Q02818 461 aa18.92■□□□□ 0.62
SNX2-201ENST00000379516 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
SNX2-201ENST00000379516 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
SNX2-201ENST00000379516 COL18A1P39060 1754 aa18.92■□□□□ 0.62
SNX2-201ENST00000379516 FKBP5Q13451 457 aaPredicted RBP18.91■□□□□ 0.62
SNX2-201ENST00000379516 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
SNX2-201ENST00000379516 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
SNX2-201ENST00000379516 EIF2S2P20042 333 aaKnown RBP18.9■□□□□ 0.62
SNX2-201ENST00000379516 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
SNX2-201ENST00000379516 MEIS3Q99687 375 aa18.9■□□□□ 0.62
SNX2-201ENST00000379516 LNPKQ9C0E8 428 aa18.9■□□□□ 0.62
SNX2-201ENST00000379516 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
SNX2-201ENST00000379516 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.62
SNX2-201ENST00000379516 SPG7Q9UQ90 795 aa18.89■□□□□ 0.62
SNX2-201ENST00000379516 ABCC6O95255 1503 aa18.89■□□□□ 0.61
SNX2-201ENST00000379516 HOXB7P09629 217 aa18.89■□□□□ 0.61
SNX2-201ENST00000379516 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
SNX2-201ENST00000379516 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.61
SNX2-201ENST00000379516 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
SNX2-201ENST00000379516 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
SNX2-201ENST00000379516 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
SNX2-201ENST00000379516 MEGF6O75095 1541 aa18.87■□□□□ 0.61
SNX2-201ENST00000379516 ANKRD44Q8N8A2 993 aa18.87■□□□□ 0.61
SNX2-201ENST00000379516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■■■□□ 15.2
SNX2-201ENST00000379516 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
SNX2-201ENST00000379516 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
SNX2-201ENST00000379516 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
SNX2-201ENST00000379516 PHKG2P15735 406 aa18.86■□□□□ 0.61
SNX2-201ENST00000379516 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
SNX2-201ENST00000379516 ATP10DQ9P241 1426 aa18.85■□□□□ 0.61
SNX2-201ENST00000379516 SEC24BO95487 1268 aa18.85■□□□□ 0.61
SNX2-201ENST00000379516 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
SNX2-201ENST00000379516 CHPF2Q9P2E5 772 aa18.85■□□□□ 0.61
SNX2-201ENST00000379516 DCTPP1Q9H773 170 aa18.83■□□□□ 0.61
SNX2-201ENST00000379516 DDRGK1Q96HY6 314 aa18.83■□□□□ 0.6
SNX2-201ENST00000379516 GIGYF1O75420 1035 aaPredicted RBP18.82■□□□□ 0.6
SNX2-201ENST00000379516 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
SNX2-201ENST00000379516 ANP32EQ9BTT0 268 aa18.82■□□□□ 0.6
SNX2-201ENST00000379516 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
SNX2-201ENST00000379516 KDM6AO15550 1401 aaPredicted RBP18.82■□□□□ 0.6
SNX2-201ENST00000379516 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
SNX2-201ENST00000379516 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
SNX2-201ENST00000379516 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
SNX2-201ENST00000379516 CYP27B1O15528 508 aa18.81■□□□□ 0.6
SNX2-201ENST00000379516 GNAI2P04899 355 aa18.81■□□□□ 0.6
SNX2-201ENST00000379516 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
SNX2-201ENST00000379516 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
SNX2-201ENST00000379516 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
SNX2-201ENST00000379516 ANXA1P04083 346 aa18.8■□□□□ 0.6
SNX2-201ENST00000379516 GNAI3P08754 354 aa18.8■□□□□ 0.6
SNX2-201ENST00000379516 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
SNX2-201ENST00000379516 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
SNX2-201ENST00000379516 PRAMEF22A3QJZ6 481 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 ZNF790Q6PG37 636 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 HMMRO75330 724 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 PXDNLA1KZ92 1463 aa18.79■□□□□ 0.6
SNX2-201ENST00000379516 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
SNX2-201ENST00000379516 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
SNX2-201ENST00000379516 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
SNX2-201ENST00000379516 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
SNX2-201ENST00000379516 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
SNX2-201ENST00000379516 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
SNX2-201ENST00000379516 PI4KAP2A4QPH2 592 aa18.77■□□□□ 0.6
SNX2-201ENST00000379516 EVA1CP58658 441 aa18.77■□□□□ 0.6
SNX2-201ENST00000379516 PI4KAP1Q8N8J0 262 aa18.77■□□□□ 0.6
SNX2-201ENST00000379516 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
SNX2-201ENST00000379516 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
SNX2-201ENST00000379516 DNAAF4Q8WXU2 420 aa18.76■□□□□ 0.59
SNX2-201ENST00000379516 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
SNX2-201ENST00000379516 SCN11AQ9UI33 1791 aa18.75■□□□□ 0.59
SNX2-201ENST00000379516 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
SNX2-201ENST00000379516 CARD10Q9BWT7 1032 aa18.75■□□□□ 0.59
SNX2-201ENST00000379516 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
SNX2-201ENST00000379516 APBB1O00213 710 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 CABP4P57796 275 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 PROSER3Q2NL68 480 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
SNX2-201ENST00000379516 LARP1Q6PKG0 1096 aaKnown RBP18.74■□□□□ 0.59
SNX2-201ENST00000379516 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
SNX2-201ENST00000379516 LRRFIP2Q9Y608 721 aaKnown RBP18.74■□□□□ 0.59
SNX2-201ENST00000379516 BEND3Q5T5X7 828 aa18.73■□□□□ 0.59
SNX2-201ENST00000379516 HYPKQ9NX55 129 aa18.73■□□□□ 0.59
SNX2-201ENST00000379516 IL2RBP14784 551 aa18.73■□□□□ 0.59
SNX2-201ENST00000379516 ATP8B2P98198 1209 aa18.73■□□□□ 0.59
SNX2-201ENST00000379516 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
SNX2-201ENST00000379516 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
SNX2-201ENST00000379516 ADCY9O60503 1353 aa18.72■□□□□ 0.59
SNX2-201ENST00000379516 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
SNX2-201ENST00000379516 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
SNX2-201ENST00000379516 ZNF496Q96IT1 587 aaPredicted RBP18.72■□□□□ 0.59
SNX2-201ENST00000379516 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
SNX2-201ENST00000379516 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNX2-201ENST00000379516 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
SNX2-201ENST00000379516 PNMA6EA0A0J9YXQ4 647 aa18.71■□□□□ 0.59
SNX2-201ENST00000379516 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
SNX2-201ENST00000379516 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms