RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 MTHFSP49914 203 aa30.29■■■□□ 2.44
CCDC107-203ENST00000378407 LINC00116Q8NCU8 138 aa30.29■■■□□ 2.44
CCDC107-203ENST00000378407 ATG3Q9NT62 314 aa30.29■■■□□ 2.44
CCDC107-203ENST00000378407 CABP4P57796 275 aa30.28■■■□□ 2.44
CCDC107-203ENST00000378407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.27■■■□□ 2.44
CCDC107-203ENST00000378407 GNPATO15228 680 aa30.26■■■□□ 2.43
CCDC107-203ENST00000378407 KDM6AO15550 1401 aaPredicted RBP30.26■■■□□ 2.43
CCDC107-203ENST00000378407 RBM42Q9BTD8 480 aaKnown RBP30.26■■■□□ 2.43
CCDC107-203ENST00000378407 KDRP35968 1356 aa30.26■■■□□ 2.43
CCDC107-203ENST00000378407 SSFA2P28290 1259 aa30.25■■■□□ 2.43
CCDC107-203ENST00000378407 ITPK1Q13572 414 aa30.25■■■□□ 2.43
CCDC107-203ENST00000378407 NLGN2Q8NFZ4 835 aa30.24■■■□□ 2.43
CCDC107-203ENST00000378407 PER1O15534 1290 aaPredicted RBP30.23■■■□□ 2.43
CCDC107-203ENST00000378407 SMIM5Q71RC9 77 aa30.22■■■□□ 2.43
CCDC107-203ENST00000378407 AMIGO3Q86WK7 504 aa30.22■■■□□ 2.43
CCDC107-203ENST00000378407 UBR3Q6ZT12 1888 aa30.22■■■□□ 2.43
CCDC107-203ENST00000378407 UTRNP46939 3433 aa30.2■■■□□ 2.43
CCDC107-203ENST00000378407 DIAPH1O60610 1272 aaKnown RBP30.2■■■□□ 2.43
CCDC107-203ENST00000378407 HMOX1P09601 288 aa30.2■■■□□ 2.43
CCDC107-203ENST00000378407 NPC1L1Q9UHC9 1359 aa30.16■■■□□ 2.42
CCDC107-203ENST00000378407 AKAP4Q5JQC9 854 aa30.16■■■□□ 2.42
CCDC107-203ENST00000378407 RTCBQ9Y3I0 505 aaKnown RBP30.16■■■□□ 2.42
CCDC107-203ENST00000378407 PTCD1O75127 700 aaKnown RBP30.15■■■□□ 2.42
CCDC107-203ENST00000378407 NFATC2IPQ8NCF5 419 aa30.15■■■□□ 2.42
CCDC107-203ENST00000378407 CD2APQ9Y5K6 639 aa30.14■■■□□ 2.42
CCDC107-203ENST00000378407 ZNF831Q5JPB2 1677 aa30.12■■■□□ 2.41
CCDC107-203ENST00000378407 SLC4A9Q96Q91 983 aa30.12■■■□□ 2.41
CCDC107-203ENST00000378407 U2SURPO15042 1029 aaKnown RBP30.11■■■□□ 2.41
CCDC107-203ENST00000378407 TRAPPC3LQ5T215 181 aa30.11■■■□□ 2.41
CCDC107-203ENST00000378407 CNTNAP4Q9C0A0 1308 aa30.1■■■□□ 2.41
CCDC107-203ENST00000378407 GOLGB1Q14789 3259 aaKnown RBP30.09■■■□□ 2.41
CCDC107-203ENST00000378407 ZNF784Q8NCA9 323 aaPredicted RBP30.09■■■□□ 2.41
CCDC107-203ENST00000378407 CHD4Q14839 1912 aa30.08■■■□□ 2.41
CCDC107-203ENST00000378407 SCN11AQ9UI33 1791 aa30.08■■■□□ 2.41
CCDC107-203ENST00000378407 COL5A3P25940 1745 aaPredicted RBP30.08■■■□□ 2.41
CCDC107-203ENST00000378407 GRIN3BO60391 1043 aa30.08■■■□□ 2.41
CCDC107-203ENST00000378407 RC3H1Q5TC82 1133 aaKnown RBP30.08■■■□□ 2.41
CCDC107-203ENST00000378407 ADRA2BP18089 450 aa30.07■■■□□ 2.4
CCDC107-203ENST00000378407 SLC52A2Q9HAB3 445 aa30.07■■■□□ 2.4
CCDC107-203ENST00000378407 RFC4P35249 363 aa30.06■■■□□ 2.4
CCDC107-203ENST00000378407 COL3A1P02461 1466 aaPredicted RBP30.06■■■□□ 2.4
CCDC107-203ENST00000378407 MMP10P09238 476 aa30.05■■■□□ 2.4
CCDC107-203ENST00000378407 YBX3P16989 372 aaKnown RBP eCLIP30.05■■■□□ 2.4
CCDC107-203ENST00000378407 MTHFSDQ2M296 383 aaKnown RBP30.05■■■□□ 2.4
CCDC107-203ENST00000378407 CFAP53Q96M91 514 aa30.05■■■□□ 2.4
CCDC107-203ENST00000378407 RNMTO43148 476 aaKnown RBP30.04■■■□□ 2.4
CCDC107-203ENST00000378407 LGR6Q9HBX8 967 aa30.04■■■□□ 2.4
CCDC107-203ENST00000378407 RPS6KA4O75676 772 aa30.03■■■□□ 2.4
CCDC107-203ENST00000378407 MRC1P22897 1456 aa30.02■■■□□ 2.4
CCDC107-203ENST00000378407 CRKLP46109 303 aaKnown RBP30.02■■■□□ 2.4
CCDC107-203ENST00000378407 ARHGEF1Q92888 912 aaKnown RBP30.02■■■□□ 2.4
CCDC107-203ENST00000378407 NLGN1Q8N2Q7 840 aa30.01■■■□□ 2.39
CCDC107-203ENST00000378407 WWC3Q9ULE0 1092 aa30■■■□□ 2.39
CCDC107-203ENST00000378407 TJP1Q07157 1748 aa29.99■■■□□ 2.39
CCDC107-203ENST00000378407 CICQ96RK0 1608 aaPredicted RBP29.97■■■□□ 2.39
CCDC107-203ENST00000378407 SLC39A6Q13433 755 aa29.97■■■□□ 2.39
CCDC107-203ENST00000378407 GAS2L2Q8NHY3 880 aa29.97■■■□□ 2.39
CCDC107-203ENST00000378407 GYS1P13807 737 aa29.95■■■□□ 2.39
CCDC107-203ENST00000378407 DNAJC10Q8IXB1 793 aa29.95■■■□□ 2.39
CCDC107-203ENST00000378407 NUDCQ9Y266 331 aa29.95■■■□□ 2.39
CCDC107-203ENST00000378407 C4AP0C0L4 1744 aa29.95■■■□□ 2.38
CCDC107-203ENST00000378407 TTC5Q8N0Z6 440 aa29.94■■■□□ 2.38
CCDC107-203ENST00000378407 PARP3Q9Y6F1 533 aa29.94■■■□□ 2.38
CCDC107-203ENST00000378407 TEFQ10587 303 aa29.93■■■□□ 2.38
CCDC107-203ENST00000378407 CCDC87Q9NVE4 849 aa29.93■■■□□ 2.38
CCDC107-203ENST00000378407 ADAMTS7Q9UKP4 1686 aa29.92■■■□□ 2.38
CCDC107-203ENST00000378407 VIRMAQ69YN4 1812 aaKnown RBP29.92■■■□□ 2.38
CCDC107-203ENST00000378407 GNAT3A8MTJ3 354 aa29.92■■■□□ 2.38
CCDC107-203ENST00000378407 SRP68Q9UHB9 627 aaKnown RBP29.91■■■□□ 2.38
CCDC107-203ENST00000378407 MYH14Q7Z406 1995 aaKnown RBP29.91■■■□□ 2.38
CCDC107-203ENST00000378407 KCPQ6ZWJ8 1503 aa29.91■■■□□ 2.38
CCDC107-203ENST00000378407 PPP2R1AP30153 589 aa29.9■■■□□ 2.38
CCDC107-203ENST00000378407 PRKAR2BP31323 418 aa29.9■■■□□ 2.38
CCDC107-203ENST00000378407 USP42Q9H9J4 1324 aaKnown RBP29.9■■■□□ 2.38
CCDC107-203ENST00000378407 INTS5Q6P9B9 1019 aaKnown RBP29.89■■■□□ 2.38
CCDC107-203ENST00000378407 C10orf71Q711Q0 1435 aa29.88■■■□□ 2.37
CCDC107-203ENST00000378407 ZPR1O75312 459 aa29.88■■■□□ 2.37
CCDC107-203ENST00000378407 U2AF1L5P0DN76 240 aaPredicted RBP29.88■■■□□ 2.37
CCDC107-203ENST00000378407 U2AF1Q01081 240 aaKnown RBP eCLIP29.88■■■□□ 2.37
CCDC107-203ENST00000378407 PXDNLA1KZ92 1463 aa29.87■■■□□ 2.37
CCDC107-203ENST00000378407 CYP19A1P11511 503 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-203ENST00000378407 TGFB2P61812 414 aa29.85■■■□□ 2.37
CCDC107-203ENST00000378407 FKBP8Q14318 412 aa29.85■■■□□ 2.37
CCDC107-203ENST00000378407 VSIG10Q8N0Z9 540 aa29.85■■■□□ 2.37
CCDC107-203ENST00000378407 RSPH6AQ9H0K4 717 aa29.85■■■□□ 2.37
CCDC107-203ENST00000378407 SOS1Q07889 1333 aaPredicted RBP29.85■■■□□ 2.37
CCDC107-203ENST00000378407 COL15A1P39059 1388 aa29.83■■■□□ 2.37
CCDC107-203ENST00000378407 GIGYF1O75420 1035 aaPredicted RBP29.83■■■□□ 2.37
CCDC107-203ENST00000378407 IL17REQ8NFR9 667 aa29.83■■■□□ 2.37
CCDC107-203ENST00000378407 ZBTB1Q9Y2K1 713 aa29.83■■■□□ 2.37
CCDC107-203ENST00000378407 A0A0G2JLW4 131 aa29.82■■■□□ 2.36
CCDC107-203ENST00000378407 STARD3NLO95772 234 aa29.82■■■□□ 2.36
CCDC107-203ENST00000378407 KIF13BQ9NQT8 1826 aa29.82■■■□□ 2.36
CCDC107-203ENST00000378407 UBR2Q8IWV8 1755 aa29.82■■■□□ 2.36
CCDC107-203ENST00000378407 USPL1Q5W0Q7 1092 aa29.81■■■□□ 2.36
CCDC107-203ENST00000378407 PHACTR3Q96KR7 559 aa29.81■■■□□ 2.36
CCDC107-203ENST00000378407 BCS1LQ9Y276 419 aa29.81■■■□□ 2.36
CCDC107-203ENST00000378407 ATP10DQ9P241 1426 aa29.8■■■□□ 2.36
CCDC107-203ENST00000378407 CANXP27824 592 aaKnown RBP29.8■■■□□ 2.36
CCDC107-203ENST00000378407 ZNF790Q6PG37 636 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms