RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 KDRP35968 1356 aa23.95■■□□□ 1.42
HLA-A-201ENST00000376802 ERVV-2B6SEH9 535 aa23.94■■□□□ 1.42
HLA-A-201ENST00000376802 C1QTNF8P60827 252 aa23.94■■□□□ 1.42
HLA-A-201ENST00000376802 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
HLA-A-201ENST00000376802 SLC4A9Q96Q91 983 aa23.94■■□□□ 1.42
HLA-A-201ENST00000376802 GNPATO15228 680 aa23.93■■□□□ 1.42
HLA-A-201ENST00000376802 DCAF5Q96JK2 942 aa23.93■■□□□ 1.42
HLA-A-201ENST00000376802 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
HLA-A-201ENST00000376802 PLEKHO1Q53GL0 409 aaPredicted RBP23.92■■□□□ 1.42
HLA-A-201ENST00000376802 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
HLA-A-201ENST00000376802 AEBP1Q8IUX7 1158 aa23.92■■□□□ 1.42
HLA-A-201ENST00000376802 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
HLA-A-201ENST00000376802 AMOTQ4VCS5 1084 aa23.9■■□□□ 1.42
HLA-A-201ENST00000376802 HSP90AB1P08238 724 aaKnown RBP23.89■■□□□ 1.42
HLA-A-201ENST00000376802 ZNF530Q6P9A1 599 aaPredicted RBP23.89■■□□□ 1.42
HLA-A-201ENST00000376802 MYH14Q7Z406 1995 aaKnown RBP23.89■■□□□ 1.42
HLA-A-201ENST00000376802 KNSTRNQ9Y448 316 aa23.87■■□□□ 1.41
HLA-A-201ENST00000376802 KIF13BQ9NQT8 1826 aa23.87■■□□□ 1.41
HLA-A-201ENST00000376802 IL13P35225 146 aa23.86■■□□□ 1.41
HLA-A-201ENST00000376802 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
HLA-A-201ENST00000376802 RBM42Q9BTD8 480 aaKnown RBP23.86■■□□□ 1.41
HLA-A-201ENST00000376802 RC3H1Q5TC82 1133 aaKnown RBP23.85■■□□□ 1.41
HLA-A-201ENST00000376802 SULT6B1Q6IMI4 303 aa23.85■■□□□ 1.41
HLA-A-201ENST00000376802 KIAA1551Q9HCM1 1747 aa23.85■■□□□ 1.41
HLA-A-201ENST00000376802 SCN11AQ9UI33 1791 aa23.85■■□□□ 1.41
HLA-A-201ENST00000376802 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
HLA-A-201ENST00000376802 MMP10P09238 476 aa23.84■■□□□ 1.41
HLA-A-201ENST00000376802 MTHFSP49914 203 aa23.84■■□□□ 1.41
HLA-A-201ENST00000376802 CABP4P57796 275 aa23.84■■□□□ 1.41
HLA-A-201ENST00000376802 RTCBQ9Y3I0 505 aaKnown RBP23.84■■□□□ 1.41
HLA-A-201ENST00000376802 SENP3-EIF4A1A0A087X0R7 540 aa23.84■■□□□ 1.41
HLA-A-201ENST00000376802 TRAPPC3LQ5T215 181 aa23.84■■□□□ 1.41
HLA-A-201ENST00000376802 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
HLA-A-201ENST00000376802 C4AP0C0L4 1744 aa23.83■■□□□ 1.4
HLA-A-201ENST00000376802 WWC3Q9ULE0 1092 aa23.83■■□□□ 1.4
HLA-A-201ENST00000376802 KIF7Q2M1P5 1343 aa23.82■■□□□ 1.4
HLA-A-201ENST00000376802 CNTNAP4Q9C0A0 1308 aa23.82■■□□□ 1.4
HLA-A-201ENST00000376802 RPS6KA4O75676 772 aa23.82■■□□□ 1.4
HLA-A-201ENST00000376802 NFATC2IPQ8NCF5 419 aa23.82■■□□□ 1.4
HLA-A-201ENST00000376802 ADCY9O60503 1353 aa23.82■■□□□ 1.4
HLA-A-201ENST00000376802 ATP10DQ9P241 1426 aa23.81■■□□□ 1.4
HLA-A-201ENST00000376802 N4BP2Q86UW6 1770 aaPredicted RBP23.81■■□□□ 1.4
HLA-A-201ENST00000376802 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
HLA-A-201ENST00000376802 CICQ96RK0 1608 aaPredicted RBP23.8■■□□□ 1.4
HLA-A-201ENST00000376802 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
HLA-A-201ENST00000376802 ADRA2BP18089 450 aa23.8■■□□□ 1.4
HLA-A-201ENST00000376802 NLGN1Q8N2Q7 840 aa23.8■■□□□ 1.4
HLA-A-201ENST00000376802 VIRMAQ69YN4 1812 aaKnown RBP23.79■■□□□ 1.4
HLA-A-201ENST00000376802 TJP1Q07157 1748 aa23.79■■□□□ 1.4
HLA-A-201ENST00000376802 PER1O15534 1290 aaPredicted RBP23.79■■□□□ 1.4
HLA-A-201ENST00000376802 GYS1P13807 737 aa23.79■■□□□ 1.4
HLA-A-201ENST00000376802 PXDNLA1KZ92 1463 aa23.78■■□□□ 1.4
HLA-A-201ENST00000376802 RFC4P35249 363 aa23.76■■□□□ 1.39
HLA-A-201ENST00000376802 CRKLP46109 303 aaKnown RBP23.76■■□□□ 1.39
HLA-A-201ENST00000376802 C10orf71Q711Q0 1435 aa23.75■■□□□ 1.39
HLA-A-201ENST00000376802 ADAMTS7Q9UKP4 1686 aa23.75■■□□□ 1.39
HLA-A-201ENST00000376802 BRCA1P38398 1863 aaKnown RBP23.75■■□□□ 1.39
HLA-A-201ENST00000376802 CEP350Q5VT06 3117 aa23.74■■□□□ 1.39
HLA-A-201ENST00000376802 TGFB2P61812 414 aa23.74■■□□□ 1.39
HLA-A-201ENST00000376802 LGR6Q9HBX8 967 aa23.74■■□□□ 1.39
HLA-A-201ENST00000376802 A0A0G2JLW4 131 aa23.73■■□□□ 1.39
HLA-A-201ENST00000376802 AKAP4Q5JQC9 854 aa23.73■■□□□ 1.39
HLA-A-201ENST00000376802 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
HLA-A-201ENST00000376802 GPBP1L1Q9HC44 474 aaPredicted RBP23.72■■□□□ 1.39
HLA-A-201ENST00000376802 HMOX1P09601 288 aa23.71■■□□□ 1.39
HLA-A-201ENST00000376802 INTS5Q6P9B9 1019 aaKnown RBP23.71■■□□□ 1.39
HLA-A-201ENST00000376802 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
HLA-A-201ENST00000376802 MRC1P22897 1456 aa23.7■■□□□ 1.38
HLA-A-201ENST00000376802 CC2D1BQ5T0F9 858 aaKnown RBP23.69■■□□□ 1.38
HLA-A-201ENST00000376802 ZNF526Q8TF50 670 aaPredicted RBP23.69■■□□□ 1.38
HLA-A-201ENST00000376802 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
HLA-A-201ENST00000376802 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
HLA-A-201ENST00000376802 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
HLA-A-201ENST00000376802 DPEP1P16444 411 aa23.68■■□□□ 1.38
HLA-A-201ENST00000376802 FKBP8Q14318 412 aa23.68■■□□□ 1.38
HLA-A-201ENST00000376802 MTHFSDQ2M296 383 aaKnown RBP23.68■■□□□ 1.38
HLA-A-201ENST00000376802 PARP3Q9Y6F1 533 aa23.68■■□□□ 1.38
HLA-A-201ENST00000376802 KCNA3P22001 575 aa23.67■■□□□ 1.38
HLA-A-201ENST00000376802 DNAJC10Q8IXB1 793 aa23.67■■□□□ 1.38
HLA-A-201ENST00000376802 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
HLA-A-201ENST00000376802 SLC39A6Q13433 755 aa23.66■■□□□ 1.38
HLA-A-201ENST00000376802 BCS1LQ9Y276 419 aa23.66■■□□□ 1.38
HLA-A-201ENST00000376802 KCPQ6ZWJ8 1503 aa23.66■■□□□ 1.38
HLA-A-201ENST00000376802 DDR1Q08345 913 aa23.65■■□□□ 1.38
HLA-A-201ENST00000376802 ARFGEF1Q9Y6D6 1849 aa23.65■■□□□ 1.38
HLA-A-201ENST00000376802 COL3A1P02461 1466 aaPredicted RBP23.64■■□□□ 1.37
HLA-A-201ENST00000376802 UBR2Q8IWV8 1755 aa23.64■■□□□ 1.37
HLA-A-201ENST00000376802 CYP19A1P11511 503 aaPredicted RBP23.63■■□□□ 1.37
HLA-A-201ENST00000376802 NPC1L1Q9UHC9 1359 aa23.63■■□□□ 1.37
HLA-A-201ENST00000376802 TM4SF1P30408 202 aa23.62■■□□□ 1.37
HLA-A-201ENST00000376802 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
HLA-A-201ENST00000376802 KIF3CO14782 793 aa23.6■■□□□ 1.37
HLA-A-201ENST00000376802 FCHSD2O94868 740 aa23.6■■□□□ 1.37
HLA-A-201ENST00000376802 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
HLA-A-201ENST00000376802 AFDNP55196 1824 aaKnown RBP23.6■■□□□ 1.37
HLA-A-201ENST00000376802 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
HLA-A-201ENST00000376802 USPL1Q5W0Q7 1092 aa23.59■■□□□ 1.37
HLA-A-201ENST00000376802 SIPA1L3O60292 1781 aaPredicted RBP23.58■■□□□ 1.36
HLA-A-201ENST00000376802 VSIG10Q8N0Z9 540 aa23.58■■□□□ 1.36
HLA-A-201ENST00000376802 PIM2Q9P1W9 311 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms