RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-204ENST00000376643 LINC00116Q8NCU8 138 aa20.07■□□□□ 0.8
HDAC6-204ENST00000376643 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
HDAC6-204ENST00000376643 ADRA2BP18089 450 aa20.06■□□□□ 0.8
HDAC6-204ENST00000376643 CABP4P57796 275 aa20.06■□□□□ 0.8
HDAC6-204ENST00000376643 RTCBQ9Y3I0 505 aaKnown RBP20.06■□□□□ 0.8
HDAC6-204ENST00000376643 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
HDAC6-204ENST00000376643 MTHFSP49914 203 aa20.05■□□□□ 0.8
HDAC6-204ENST00000376643 ZNF831Q5JPB2 1677 aa20.04■□□□□ 0.8
HDAC6-204ENST00000376643 RC3H1Q5TC82 1133 aaKnown RBP20.04■□□□□ 0.8
HDAC6-204ENST00000376643 KDRP35968 1356 aa20.04■□□□□ 0.8
HDAC6-204ENST00000376643 UTRNP46939 3433 aa20.03■□□□□ 0.8
HDAC6-204ENST00000376643 ITPK1Q13572 414 aa20.03■□□□□ 0.8
HDAC6-204ENST00000376643 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
HDAC6-204ENST00000376643 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
HDAC6-204ENST00000376643 RBM42Q9BTD8 480 aaKnown RBP20.03■□□□□ 0.8
HDAC6-204ENST00000376643 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.8
HDAC6-204ENST00000376643 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-204ENST00000376643 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.8
HDAC6-204ENST00000376643 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC6-204ENST00000376643 KIF7Q2M1P5 1343 aa20.01■□□□□ 0.79
HDAC6-204ENST00000376643 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
HDAC6-204ENST00000376643 IL13P35225 146 aa20■□□□□ 0.79
HDAC6-204ENST00000376643 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
HDAC6-204ENST00000376643 RFC4P35249 363 aa19.98■□□□□ 0.79
HDAC6-204ENST00000376643 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
HDAC6-204ENST00000376643 AMIGO3Q86WK7 504 aa19.98■□□□□ 0.79
HDAC6-204ENST00000376643 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
HDAC6-204ENST00000376643 RPS6KA4O75676 772 aa19.97■□□□□ 0.79
HDAC6-204ENST00000376643 C1QTNF8P60827 252 aa19.97■□□□□ 0.79
HDAC6-204ENST00000376643 MMP10P09238 476 aa19.96■□□□□ 0.79
HDAC6-204ENST00000376643 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
HDAC6-204ENST00000376643 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
HDAC6-204ENST00000376643 DIAPH1O60610 1272 aaKnown RBP19.94■□□□□ 0.78
HDAC6-204ENST00000376643 TGFB2P61812 414 aa19.94■□□□□ 0.78
HDAC6-204ENST00000376643 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
HDAC6-204ENST00000376643 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
HDAC6-204ENST00000376643 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
HDAC6-204ENST00000376643 SLC4A9Q96Q91 983 aa19.93■□□□□ 0.78
HDAC6-204ENST00000376643 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
HDAC6-204ENST00000376643 COL5A3P25940 1745 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-204ENST00000376643 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-204ENST00000376643 SMIM5Q71RC9 77 aa19.91■□□□□ 0.78
HDAC6-204ENST00000376643 SLC52A2Q9HAB3 445 aa19.91■□□□□ 0.78
HDAC6-204ENST00000376643 CICQ96RK0 1608 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-204ENST00000376643 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
HDAC6-204ENST00000376643 CRKLP46109 303 aaKnown RBP19.9■□□□□ 0.78
HDAC6-204ENST00000376643 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
HDAC6-204ENST00000376643 GYS1P13807 737 aa19.89■□□□□ 0.77
HDAC6-204ENST00000376643 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
HDAC6-204ENST00000376643 GPBP1L1Q9HC44 474 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-204ENST00000376643 ATP10DQ9P241 1426 aa19.89■□□□□ 0.77
HDAC6-204ENST00000376643 GOLGB1Q14789 3259 aaKnown RBP19.89■□□□□ 0.77
HDAC6-204ENST00000376643 SCN11AQ9UI33 1791 aa19.88■□□□□ 0.77
HDAC6-204ENST00000376643 MRC1P22897 1456 aa19.88■□□□□ 0.77
HDAC6-204ENST00000376643 HMOX1P09601 288 aa19.88■□□□□ 0.77
HDAC6-204ENST00000376643 RNMTO43148 476 aaKnown RBP19.87■□□□□ 0.77
HDAC6-204ENST00000376643 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 ADCY9O60503 1353 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
HDAC6-204ENST00000376643 C4AP0C0L4 1744 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 GAS2L2Q8NHY3 880 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 CFAP53Q96M91 514 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 KIF13BQ9NQT8 1826 aa19.86■□□□□ 0.77
HDAC6-204ENST00000376643 ZPR1O75312 459 aa19.85■□□□□ 0.77
HDAC6-204ENST00000376643 TTC5Q8N0Z6 440 aa19.84■□□□□ 0.77
HDAC6-204ENST00000376643 MTHFSDQ2M296 383 aaKnown RBP19.83■□□□□ 0.77
HDAC6-204ENST00000376643 BCS1LQ9Y276 419 aa19.83■□□□□ 0.77
HDAC6-204ENST00000376643 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
HDAC6-204ENST00000376643 LGR6Q9HBX8 967 aa19.82■□□□□ 0.76
HDAC6-204ENST00000376643 TJP1Q07157 1748 aa19.82■□□□□ 0.76
HDAC6-204ENST00000376643 TEFQ10587 303 aa19.81■□□□□ 0.76
HDAC6-204ENST00000376643 INTS5Q6P9B9 1019 aaKnown RBP19.81■□□□□ 0.76
HDAC6-204ENST00000376643 DNAJC10Q8IXB1 793 aa19.81■□□□□ 0.76
HDAC6-204ENST00000376643 WWC3Q9ULE0 1092 aa19.81■□□□□ 0.76
HDAC6-204ENST00000376643 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
HDAC6-204ENST00000376643 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
HDAC6-204ENST00000376643 SOS1Q07889 1333 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-204ENST00000376643 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
HDAC6-204ENST00000376643 STARD3NLO95772 234 aa19.8■□□□□ 0.76
HDAC6-204ENST00000376643 TEX13AQ9BXU3 409 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-204ENST00000376643 PIM2Q9P1W9 311 aa19.8■□□□□ 0.76
HDAC6-204ENST00000376643 ADAMTS7Q9UKP4 1686 aa19.79■□□□□ 0.76
HDAC6-204ENST00000376643 GNAT3A8MTJ3 354 aa19.79■□□□□ 0.76
HDAC6-204ENST00000376643 FCHSD2O94868 740 aa19.79■□□□□ 0.76
HDAC6-204ENST00000376643 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-204ENST00000376643 DPEP1P16444 411 aa19.79■□□□□ 0.76
HDAC6-204ENST00000376643 A0A087WZG4 1122 aa19.78■□□□□ 0.76
HDAC6-204ENST00000376643 FKBP8Q14318 412 aa19.78■□□□□ 0.76
HDAC6-204ENST00000376643 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
HDAC6-204ENST00000376643 NARFQ9UHQ1 456 aa19.78■□□□□ 0.76
HDAC6-204ENST00000376643 COL15A1P39059 1388 aa19.78■□□□□ 0.76
HDAC6-204ENST00000376643 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-204ENST00000376643 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
HDAC6-204ENST00000376643 ARHGAP27Q6ZUM4 889 aa19.77■□□□□ 0.76
HDAC6-204ENST00000376643 NPM2Q86SE8 214 aaKnown RBP19.77■□□□□ 0.76
HDAC6-204ENST00000376643 KCPQ6ZWJ8 1503 aa19.76■□□□□ 0.75
HDAC6-204ENST00000376643 DALRD3Q5D0E6 543 aaKnown RBP19.76■□□□□ 0.75
HDAC6-204ENST00000376643 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms