RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SSH1Q8WYL5 1049 aa20.2■□□□□ 0.82
MCF2L-203ENST00000375604 MKNK2Q9HBH9 465 aa20.2■□□□□ 0.82
MCF2L-203ENST00000375604 KRT85P78386 507 aa20.2■□□□□ 0.82
MCF2L-203ENST00000375604 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
MCF2L-203ENST00000375604 CCDC192P0DO97 292 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 ACSBG1Q96GR2 724 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
MCF2L-203ENST00000375604 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 ANKRD62A6NC57 917 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 MBD3O95983 291 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 DZIP1Q86YF9 867 aaKnown RBP20.19■□□□□ 0.82
MCF2L-203ENST00000375604 LIG1P18858 919 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 MX1P20591 662 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 CENPHQ9H3R5 247 aa20.19■□□□□ 0.82
MCF2L-203ENST00000375604 WDR78Q5VTH9 848 aa20.18■□□□□ 0.82
MCF2L-203ENST00000375604 ZNHIT6Q9NWK9 470 aaKnown RBP20.18■□□□□ 0.82
MCF2L-203ENST00000375604 SSR1P43307 286 aaKnown RBP20.18■□□□□ 0.82
MCF2L-203ENST00000375604 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
MCF2L-203ENST00000375604 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
MCF2L-203ENST00000375604 IL27Q8NEV9 243 aa20.18■□□□□ 0.82
MCF2L-203ENST00000375604 CCT2P78371 535 aaKnown RBP20.17■□□□□ 0.82
MCF2L-203ENST00000375604 ECM2O94769 699 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-203ENST00000375604 CEP57L1Q8IYX8 460 aa20.17■□□□□ 0.82
MCF2L-203ENST00000375604 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
MCF2L-203ENST00000375604 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
MCF2L-203ENST00000375604 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-203ENST00000375604 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
MCF2L-203ENST00000375604 STIM1Q13586 685 aa20.17■□□□□ 0.82
MCF2L-203ENST00000375604 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
MCF2L-203ENST00000375604 NEFHP12036 1026 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 KRT28Q7Z3Y7 464 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 ACBD3Q9H3P7 528 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 UBA5Q9GZZ9 404 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 CCDC181Q5TID7 509 aa20.16■□□□□ 0.82
MCF2L-203ENST00000375604 ENOX2Q16206 610 aaKnown RBP20.15■□□□□ 0.82
MCF2L-203ENST00000375604 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 CDR1P51861 262 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 KLHL10Q6JEL2 608 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
MCF2L-203ENST00000375604 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 SYCE3A1L190 88 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 NAIPQ13075 1403 aa20.15■□□□□ 0.82
MCF2L-203ENST00000375604 FILIP1Q7Z7B0 1213 aa20.14■□□□□ 0.82
MCF2L-203ENST00000375604 ADGRL1O94910 1474 aa20.14■□□□□ 0.81
MCF2L-203ENST00000375604 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-203ENST00000375604 VAT1LQ9HCJ6 419 aa20.14■□□□□ 0.81
MCF2L-203ENST00000375604 CDKL5O76039 1030 aa20.14■□□□□ 0.81
MCF2L-203ENST00000375604 FAM135AQ9P2D6 1515 aa20.14■□□□□ 0.81
MCF2L-203ENST00000375604 SEC63Q9UGP8 760 aaKnown RBP20.13■□□□□ 0.81
MCF2L-203ENST00000375604 SCLT1Q96NL6 688 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 A0A087WZG4 1122 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
MCF2L-203ENST00000375604 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 NAPBQ9H115 298 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 TMOD2Q9NZR1 351 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 NUP62CLQ9H1M0 184 aa20.13■□□□□ 0.81
MCF2L-203ENST00000375604 HAND2P61296 217 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-203ENST00000375604 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
MCF2L-203ENST00000375604 IDI1Q13907 227 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 MAP7D2Q96T17 732 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 KIF14Q15058 1648 aa20.12■□□□□ 0.81
MCF2L-203ENST00000375604 ZNF622Q969S3 477 aaKnown RBP eCLIP20.11■□□□□ 0.81
MCF2L-203ENST00000375604 DACH1Q9UI36 760 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 NOS1P29475 1434 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 GRPEL1Q9HAV7 217 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 AKAP2Q9Y2D5 859 aa20.11■□□□□ 0.81
MCF2L-203ENST00000375604 DNA2P51530 1060 aa20.1■□□□□ 0.81
MCF2L-203ENST00000375604 GOLIM4O00461 696 aa20.1■□□□□ 0.81
MCF2L-203ENST00000375604 RPAP2Q8IXW5 612 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-203ENST00000375604 EXOC5O00471 708 aa20.1■□□□□ 0.81
MCF2L-203ENST00000375604 ISM2Q6H9L7 571 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 TAX1BP1Q86VP1 789 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-203ENST00000375604 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 SLC5A1P13866 664 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 ANKRD18BA2A2Z9 1011 aa20.09■□□□□ 0.81
MCF2L-203ENST00000375604 EIF5P55010 431 aaKnown RBP20.09■□□□□ 0.81
MCF2L-203ENST00000375604 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-203ENST00000375604 ZNF444Q8N0Y2 327 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-203ENST00000375604 F8W031 263 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-203ENST00000375604 MYO6Q9UM54 1294 aa20.08■□□□□ 0.81
MCF2L-203ENST00000375604 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.8
MCF2L-203ENST00000375604 H0YHG0 523 aa20.08■□□□□ 0.8
MCF2L-203ENST00000375604 GDPD2Q9HCC8 539 aa20.07■□□□□ 0.8
MCF2L-203ENST00000375604 GRM1Q13255 1194 aa20.07■□□□□ 0.8
MCF2L-203ENST00000375604 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
MCF2L-203ENST00000375604 CFAP45Q9UL16 551 aa20.07■□□□□ 0.8
MCF2L-203ENST00000375604 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-203ENST00000375604 ZNF213O14771 459 aa20.07■□□□□ 0.8
MCF2L-203ENST00000375604 RDXP35241 583 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms