RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 AMOTL2Q9Y2J4 779 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 DZIP1Q86YF9 867 aaKnown RBP13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 DBF4Q9UBU7 674 aaPredicted RBP13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 KIF20AO95235 890 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 STK3Q13188 491 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 SPATA32Q96LK8 384 aa13.02□□□□□ -0.33
PHACTR4-202ENST00000373839 CETN2P41208 172 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 KIF14Q15058 1648 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 SSBP05455 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 CCDC181Q5TID7 509 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 GOLGA6L10A6NI86 522 aa13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
PHACTR4-202ENST00000373839 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 IQCA1Q86XH1 822 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 NAPBQ9H115 298 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
PHACTR4-202ENST00000373839 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
PHACTR4-202ENST00000373839 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
PHACTR4-202ENST00000373839 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 MX1P20591 662 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 CUL5Q93034 780 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 ARHGEF11O15085 1522 aa13□□□□□ -0.33
PHACTR4-202ENST00000373839 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 NCOA1Q15788 1441 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 ERLIN1O75477 346 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 SH2B1Q9NRF2 756 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 CUL7Q14999 1698 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
PHACTR4-202ENST00000373839 NEFHP12036 1026 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 PTPRCP08575 1304 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 NEBLO76041 1014 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 ZNF444Q8N0Y2 327 aaPredicted RBP12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 MYD88Q99836 296 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■□□□□ 8.1
PHACTR4-202ENST00000373839 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 SPTY2D1Q68D10 685 aaPredicted RBP12.98□□□□□ -0.33
PHACTR4-202ENST00000373839 FGFR1OPO95684 399 aaKnown RBP12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 TRAF1Q13077 416 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 NAIPQ13075 1403 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
PHACTR4-202ENST00000373839 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 TSG101Q99816 390 aa12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 FOXO3O43524 673 aa12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 TAF4BQ92750 862 aa12.96□□□□□ -0.33
PHACTR4-202ENST00000373839 BAG3O95817 575 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 MPHOSPH6Q99547 160 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 MCM10Q7L590 875 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 VPS36Q86VN1 386 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 MSH6P52701 1360 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 H0YHG0 523 aa12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-202ENST00000373839 SCLT1Q96NL6 688 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 NME9Q86XW9 330 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-202ENST00000373839 TOM1O60784 492 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms