RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 F6X3S4 739 aa24.62■■□□□ 1.53
HDAC1-201ENST00000373548 EIF4A1P60842 406 aaKnown RBP24.62■■□□□ 1.53
HDAC1-201ENST00000373548 TEFQ10587 303 aa24.62■■□□□ 1.53
HDAC1-201ENST00000373548 CHD1LQ86WJ1 897 aa24.62■■□□□ 1.53
HDAC1-201ENST00000373548 FLIIQ13045 1269 aa24.62■■□□□ 1.53
HDAC1-201ENST00000373548 ADAMTS7Q9UKP4 1686 aa24.62■■□□□ 1.53
HDAC1-201ENST00000373548 LNPKQ9C0E8 428 aa24.61■■□□□ 1.53
HDAC1-201ENST00000373548 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
HDAC1-201ENST00000373548 SEC24BO95487 1268 aa24.61■■□□□ 1.53
HDAC1-201ENST00000373548 MEIS3Q99687 375 aa24.61■■□□□ 1.53
HDAC1-201ENST00000373548 SLAIN2Q9P270 581 aa24.61■■□□□ 1.53
HDAC1-201ENST00000373548 SIPA1L3O60292 1781 aaPredicted RBP24.61■■□□□ 1.53
HDAC1-201ENST00000373548 CPDO75976 1380 aa24.6■■□□□ 1.53
HDAC1-201ENST00000373548 CHRNA2Q15822 529 aa24.6■■□□□ 1.53
HDAC1-201ENST00000373548 KCNQ3O43525 872 aa24.59■■□□□ 1.53
HDAC1-201ENST00000373548 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
HDAC1-201ENST00000373548 HDGFL1Q5TGJ6 251 aa24.59■■□□□ 1.53
HDAC1-201ENST00000373548 SLC4A10Q6U841 1118 aa24.59■■□□□ 1.53
HDAC1-201ENST00000373548 BTBD11A6QL63 1104 aa24.59■■□□□ 1.53
HDAC1-201ENST00000373548 N4BP2Q86UW6 1770 aaPredicted RBP24.59■■□□□ 1.53
HDAC1-201ENST00000373548 ANKRD45Q5TZF3 282 aa24.58■■□□□ 1.53
HDAC1-201ENST00000373548 ANKRD44Q8N8A2 993 aa24.58■■□□□ 1.53
HDAC1-201ENST00000373548 SOS2Q07890 1332 aaPredicted RBP24.58■■□□□ 1.53
HDAC1-201ENST00000373548 FKBP5Q13451 457 aaPredicted RBP24.58■■□□□ 1.52
HDAC1-201ENST00000373548 RAPGEF4Q8WZA2 1011 aa24.58■■□□□ 1.52
HDAC1-201ENST00000373548 DDRGK1Q96HY6 314 aa24.58■■□□□ 1.52
HDAC1-201ENST00000373548 HOXB7P09629 217 aa24.57■■□□□ 1.52
HDAC1-201ENST00000373548 MEGF6O75095 1541 aa24.57■■□□□ 1.52
HDAC1-201ENST00000373548 CEP85Q6P2H3 762 aa24.56■■□□□ 1.52
HDAC1-201ENST00000373548 RPAP2Q8IXW5 612 aaPredicted RBP24.56■■□□□ 1.52
HDAC1-201ENST00000373548 CSB-PGBD3P0DP91 1061 aa24.55■■□□□ 1.52
HDAC1-201ENST00000373548 DCTPP1Q9H773 170 aa24.55■■□□□ 1.52
HDAC1-201ENST00000373548 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
HDAC1-201ENST00000373548 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
HDAC1-201ENST00000373548 EIF2S2P20042 333 aaKnown RBP24.53■■□□□ 1.52
HDAC1-201ENST00000373548 PXDNLA1KZ92 1463 aa24.53■■□□□ 1.52
HDAC1-201ENST00000373548 PHAXQ9H814 394 aaKnown RBP24.52■■□□□ 1.52
HDAC1-201ENST00000373548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.52■■□□□ 1.522e-7■■□□□ 11.5
HDAC1-201ENST00000373548 KDM6AO15550 1401 aaPredicted RBP24.51■■□□□ 1.51
HDAC1-201ENST00000373548 PKD1L3Q7Z443 1732 aa24.51■■□□□ 1.51
HDAC1-201ENST00000373548 ABCA3Q99758 1704 aa24.51■■□□□ 1.51
HDAC1-201ENST00000373548 SPG7Q9UQ90 795 aa24.5■■□□□ 1.51
HDAC1-201ENST00000373548 PLEKHG2Q9H7P9 1386 aa24.5■■□□□ 1.51
HDAC1-201ENST00000373548 HEG1Q9ULI3 1381 aa24.5■■□□□ 1.51
HDAC1-201ENST00000373548 PHKG2P15735 406 aa24.49■■□□□ 1.51
HDAC1-201ENST00000373548 CHMP4AQ9BY43 222 aa24.49■■□□□ 1.51
HDAC1-201ENST00000373548 CHPF2Q9P2E5 772 aa24.49■■□□□ 1.51
HDAC1-201ENST00000373548 NHSL1Q5SYE7 1610 aa24.49■■□□□ 1.51
HDAC1-201ENST00000373548 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
HDAC1-201ENST00000373548 PRDM11Q9NQV5 511 aa24.47■■□□□ 1.51
HDAC1-201ENST00000373548 GNAI2P04899 355 aa24.46■■□□□ 1.51
HDAC1-201ENST00000373548 BMP2KLQ5H9B9 411 aa24.46■■□□□ 1.51
HDAC1-201ENST00000373548 GNAI3P08754 354 aa24.45■■□□□ 1.5
HDAC1-201ENST00000373548 IFNL2Q8IZJ0 200 aa24.45■■□□□ 1.5
HDAC1-201ENST00000373548 UPF2Q9HAU5 1272 aaKnown RBP24.45■■□□□ 1.5
HDAC1-201ENST00000373548 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
HDAC1-201ENST00000373548 HMMRO75330 724 aa24.43■■□□□ 1.5
HDAC1-201ENST00000373548 TBC1D32Q96NH3 1257 aa24.43■■□□□ 1.5
HDAC1-201ENST00000373548 WDR17Q8IZU2 1322 aa24.43■■□□□ 1.5
HDAC1-201ENST00000373548 CYP27B1O15528 508 aa24.43■■□□□ 1.5
HDAC1-201ENST00000373548 ANXA1P04083 346 aa24.43■■□□□ 1.5
HDAC1-201ENST00000373548 USP44Q9H0E7 712 aa24.42■■□□□ 1.5
HDAC1-201ENST00000373548 DBF4Q9UBU7 674 aaPredicted RBP24.42■■□□□ 1.5
HDAC1-201ENST00000373548 COL5A2P05997 1499 aaPredicted RBP24.42■■□□□ 1.5
HDAC1-201ENST00000373548 MRC1P22897 1456 aa24.42■■□□□ 1.5
HDAC1-201ENST00000373548 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
HDAC1-201ENST00000373548 PARP4Q9UKK3 1724 aaKnown RBP24.41■■□□□ 1.5
HDAC1-201ENST00000373548 ZNF790Q6PG37 636 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 PLEKHM2Q8IWE5 1019 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 C5P01031 1676 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 SLC4A3P48751 1232 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 NFATC2IPQ8NCF5 419 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
HDAC1-201ENST00000373548 ADCY9O60503 1353 aa24.39■■□□□ 1.5
HDAC1-201ENST00000373548 PI4KAP2A4QPH2 592 aa24.39■■□□□ 1.49
HDAC1-201ENST00000373548 SLC39A6Q13433 755 aa24.39■■□□□ 1.49
HDAC1-201ENST00000373548 PI4KAP1Q8N8J0 262 aa24.39■■□□□ 1.49
HDAC1-201ENST00000373548 DNAAF4Q8WXU2 420 aa24.39■■□□□ 1.49
HDAC1-201ENST00000373548 SRCIN1Q9C0H9 1055 aa24.39■■□□□ 1.49
HDAC1-201ENST00000373548 PROSER3Q2NL68 480 aa24.38■■□□□ 1.49
HDAC1-201ENST00000373548 TOM1L2Q6ZVM7 507 aa24.38■■□□□ 1.49
HDAC1-201ENST00000373548 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
HDAC1-201ENST00000373548 LRRFIP2Q9Y608 721 aaKnown RBP24.38■■□□□ 1.49
HDAC1-201ENST00000373548 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
HDAC1-201ENST00000373548 BEND3Q5T5X7 828 aa24.37■■□□□ 1.49
HDAC1-201ENST00000373548 ATP8B2P98198 1209 aa24.37■■□□□ 1.49
HDAC1-201ENST00000373548 APBB1O00213 710 aa24.36■■□□□ 1.49
HDAC1-201ENST00000373548 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
HDAC1-201ENST00000373548 UBTFL1P0CB47 393 aaPredicted RBP24.36■■□□□ 1.49
HDAC1-201ENST00000373548 PNMA6EA0A0J9YXQ4 647 aa24.35■■□□□ 1.49
HDAC1-201ENST00000373548 HSP90AB1P08238 724 aaKnown RBP24.35■■□□□ 1.49
HDAC1-201ENST00000373548 DAXXQ9UER7 740 aaPredicted RBP24.35■■□□□ 1.49
HDAC1-201ENST00000373548 OTUD7AQ8TE49 926 aaPredicted RBP24.35■■□□□ 1.49
HDAC1-201ENST00000373548 GSPT1P15170 499 aaKnown RBP24.34■■□□□ 1.49
HDAC1-201ENST00000373548 BCL11AQ9H165 835 aa24.34■■□□□ 1.49
HDAC1-201ENST00000373548 C22orf23Q9BZE7 217 aa24.33■■□□□ 1.49
HDAC1-201ENST00000373548 HYPKQ9NX55 129 aa24.33■■□□□ 1.49
HDAC1-201ENST00000373548 PDIA6Q15084 440 aa24.32■■□□□ 1.48
HDAC1-201ENST00000373548 TTC22Q5TAA0 569 aa24.32■■□□□ 1.48
HDAC1-201ENST00000373548 DDX21Q9NR30 783 aaKnown RBP eCLIP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 587.7 ms