RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 ANKRD44Q8N8A2 993 aa29.74■■■□□ 2.35
SNX21-204ENST00000372542 DDX17Q92841 729 aaKnown RBP29.74■■■□□ 2.35
SNX21-204ENST00000372542 FLIIQ13045 1269 aa29.73■■■□□ 2.35
SNX21-204ENST00000372542 UPF2Q9HAU5 1272 aaKnown RBP29.73■■■□□ 2.35
SNX21-204ENST00000372542 ATP10DQ9P241 1426 aa29.73■■■□□ 2.35
SNX21-204ENST00000372542 RNMTO43148 476 aaKnown RBP29.73■■■□□ 2.35
SNX21-204ENST00000372542 LNPKQ9C0E8 428 aa29.73■■■□□ 2.35
SNX21-204ENST00000372542 N4BP2Q86UW6 1770 aaPredicted RBP29.72■■■□□ 2.35
SNX21-204ENST00000372542 EIF4A1P60842 406 aaKnown RBP29.72■■■□□ 2.35
SNX21-204ENST00000372542 ANKRD45Q5TZF3 282 aa29.72■■■□□ 2.35
SNX21-204ENST00000372542 PXDNLA1KZ92 1463 aa29.71■■■□□ 2.35
SNX21-204ENST00000372542 ADAMTS7Q9UKP4 1686 aa29.71■■■□□ 2.35
SNX21-204ENST00000372542 HDGFL1Q5TGJ6 251 aa29.7■■■□□ 2.34
SNX21-204ENST00000372542 DCTPP1Q9H773 170 aa29.7■■■□□ 2.34
SNX21-204ENST00000372542 CPDO75976 1380 aa29.7■■■□□ 2.34
SNX21-204ENST00000372542 BTBD11A6QL63 1104 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 FKBP5Q13451 457 aaPredicted RBP29.68■■■□□ 2.34
SNX21-204ENST00000372542 CEP85Q6P2H3 762 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 MPRIPQ6WCQ1 1025 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 BRINP3Q76B58 766 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 SEC24BO95487 1268 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 SLC4A10Q6U841 1118 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 MEIS3Q99687 375 aa29.68■■■□□ 2.34
SNX21-204ENST00000372542 RAPGEF4Q8WZA2 1011 aa29.67■■■□□ 2.34
SNX21-204ENST00000372542 SIPA1L3O60292 1781 aaPredicted RBP29.66■■■□□ 2.34
SNX21-204ENST00000372542 F6X3S4 739 aa29.66■■■□□ 2.34
SNX21-204ENST00000372542 NLRP2Q9NX02 1062 aa29.65■■■□□ 2.34
SNX21-204ENST00000372542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.65■■■□□ 2.34
SNX21-204ENST00000372542 DAXXQ9UER7 740 aaPredicted RBP29.64■■■□□ 2.34
SNX21-204ENST00000372542 HMMRO75330 724 aa29.64■■■□□ 2.33
SNX21-204ENST00000372542 TATP17735 454 aaPredicted RBP29.64■■■□□ 2.33
SNX21-204ENST00000372542 BMP2KLQ5H9B9 411 aa29.64■■■□□ 2.33
SNX21-204ENST00000372542 NECTIN2Q92692 538 aa29.64■■■□□ 2.33
SNX21-204ENST00000372542 GNAI3P08754 354 aa29.62■■■□□ 2.33
SNX21-204ENST00000372542 CABLES1Q8TDN4 633 aa29.61■■■□□ 2.33
SNX21-204ENST00000372542 SPG7Q9UQ90 795 aa29.61■■■□□ 2.33
SNX21-204ENST00000372542 ZNF335Q9H4Z2 1342 aaPredicted RBP29.61■■■□□ 2.33
SNX21-204ENST00000372542 TBC1D32Q96NH3 1257 aa29.61■■■□□ 2.33
SNX21-204ENST00000372542 SLAIN2Q9P270 581 aa29.61■■■□□ 2.33
SNX21-204ENST00000372542 GNAI2P04899 355 aa29.6■■■□□ 2.33
SNX21-204ENST00000372542 CSB-PGBD3P0DP91 1061 aa29.6■■■□□ 2.33
SNX21-204ENST00000372542 SOS2Q07890 1332 aaPredicted RBP29.6■■■□□ 2.33
SNX21-204ENST00000372542 SCN11AQ9UI33 1791 aa29.59■■■□□ 2.33
SNX21-204ENST00000372542 HEG1Q9ULI3 1381 aa29.58■■■□□ 2.33
SNX21-204ENST00000372542 KCNQ3O43525 872 aa29.57■■■□□ 2.32
SNX21-204ENST00000372542 EIF2S2P20042 333 aaKnown RBP29.57■■■□□ 2.32
SNX21-204ENST00000372542 MEGF6O75095 1541 aa29.56■■■□□ 2.32
SNX21-204ENST00000372542 PKD1L3Q7Z443 1732 aa29.55■■■□□ 2.32
SNX21-204ENST00000372542 CHRNA2Q15822 529 aa29.55■■■□□ 2.32
SNX21-204ENST00000372542 PHAXQ9H814 394 aaKnown RBP29.54■■■□□ 2.32
SNX21-204ENST00000372542 PHKG2P15735 406 aa29.53■■■□□ 2.32
SNX21-204ENST00000372542 IFNL2Q8IZJ0 200 aa29.53■■■□□ 2.32
SNX21-204ENST00000372542 CHPF2Q9P2E5 772 aa29.53■■■□□ 2.32
SNX21-204ENST00000372542 DBF4Q9UBU7 674 aaPredicted RBP29.53■■■□□ 2.32
SNX21-204ENST00000372542 GIGYF1O75420 1035 aaPredicted RBP29.52■■■□□ 2.32
SNX21-204ENST00000372542 KDM6AO15550 1401 aaPredicted RBP29.51■■■□□ 2.31
SNX21-204ENST00000372542 BECN1Q14457 450 aa29.51■■■□□ 2.31
SNX21-204ENST00000372542 PLEKHM2Q8IWE5 1019 aa29.5■■■□□ 2.31
SNX21-204ENST00000372542 SLC52A2Q9HAB3 445 aa29.5■■■□□ 2.31
SNX21-204ENST00000372542 EIF5BO60841 1220 aaKnown RBP29.49■■■□□ 2.31
SNX21-204ENST00000372542 HSP90AB1P08238 724 aaKnown RBP29.49■■■□□ 2.31
SNX21-204ENST00000372542 SRCIN1Q9C0H9 1055 aa29.49■■■□□ 2.31
SNX21-204ENST00000372542 MRC1P22897 1456 aa29.49■■■□□ 2.31
SNX21-204ENST00000372542 MFAP1P55081 439 aaKnown RBP29.48■■■□□ 2.31
SNX21-204ENST00000372542 ATP8B2P98198 1209 aa29.48■■■□□ 2.31
SNX21-204ENST00000372542 NHSL1Q5SYE7 1610 aa29.48■■■□□ 2.31
SNX21-204ENST00000372542 C22orf23Q9BZE7 217 aa29.48■■■□□ 2.31
SNX21-204ENST00000372542 PRDM11Q9NQV5 511 aa29.48■■■□□ 2.31
SNX21-204ENST00000372542 ABCA3Q99758 1704 aa29.47■■■□□ 2.31
SNX21-204ENST00000372542 UBTFL1P0CB47 393 aaPredicted RBP29.47■■■□□ 2.31
SNX21-204ENST00000372542 DNAAF4Q8WXU2 420 aa29.47■■■□□ 2.31
SNX21-204ENST00000372542 DCAF5Q96JK2 942 aa29.47■■■□□ 2.31
SNX21-204ENST00000372542 USP44Q9H0E7 712 aa29.47■■■□□ 2.31
SNX21-204ENST00000372542 PARP4Q9UKK3 1724 aaKnown RBP29.46■■■□□ 2.31
SNX21-204ENST00000372542 WDR17Q8IZU2 1322 aa29.45■■■□□ 2.31
SNX21-204ENST00000372542 ZNF790Q6PG37 636 aa29.44■■■□□ 2.3
SNX21-204ENST00000372542 HYPKQ9NX55 129 aa29.44■■■□□ 2.3
SNX21-204ENST00000372542 SLC4A3P48751 1232 aa29.43■■■□□ 2.3
SNX21-204ENST00000372542 TTC22Q5TAA0 569 aa29.43■■■□□ 2.3
SNX21-204ENST00000372542 PI4KAP2A4QPH2 592 aa29.43■■■□□ 2.3
SNX21-204ENST00000372542 BEND3Q5T5X7 828 aa29.43■■■□□ 2.3
SNX21-204ENST00000372542 PI4KAP1Q8N8J0 262 aa29.43■■■□□ 2.3
SNX21-204ENST00000372542 LRRFIP2Q9Y608 721 aaKnown RBP29.43■■■□□ 2.3
SNX21-204ENST00000372542 CDC45O75419 566 aa29.41■■■□□ 2.3
SNX21-204ENST00000372542 ADCY9O60503 1353 aa29.41■■■□□ 2.3
SNX21-204ENST00000372542 COL5A2P05997 1499 aaPredicted RBP29.41■■■□□ 2.3
SNX21-204ENST00000372542 CYP27B1O15528 508 aa29.41■■■□□ 2.3
SNX21-204ENST00000372542 DDX21Q9NR30 783 aaKnown RBP eCLIP29.4■■■□□ 2.3
SNX21-204ENST00000372542 GSPT1P15170 499 aaKnown RBP29.39■■■□□ 2.3
SNX21-204ENST00000372542 RBM25P49756 843 aaKnown RBP29.38■■■□□ 2.29
SNX21-204ENST00000372542 KSR2Q6VAB6 950 aa29.38■■■□□ 2.29
SNX21-204ENST00000372542 C16orf71Q8IYS4 520 aaPredicted RBP29.38■■■□□ 2.29
SNX21-204ENST00000372542 NFATC2IPQ8NCF5 419 aa29.38■■■□□ 2.29
SNX21-204ENST00000372542 SMARCA5O60264 1052 aaPredicted RBP29.38■■■□□ 2.29
SNX21-204ENST00000372542 ALDH1L1O75891 902 aa29.38■■■□□ 2.29
SNX21-204ENST00000372542 TBC1D9Q6ZT07 1266 aa29.38■■■□□ 2.29
SNX21-204ENST00000372542 PNMA6EA0A0J9YXQ4 647 aa29.37■■■□□ 2.29
SNX21-204ENST00000372542 TOM1L2Q6ZVM7 507 aa29.37■■■□□ 2.29
SNX21-204ENST00000372542 OSBPL3Q9H4L5 887 aa29.37■■■□□ 2.29
SNX21-204ENST00000372542 IBTKQ9P2D0 1353 aaPredicted RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms