RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 FRAT2O75474 233 aaPredicted RBP35.67■■■■□ 3.3
SDCCAG3-204ENST00000371725 TOM1L2Q6ZVM7 507 aa35.67■■■■□ 3.3
SDCCAG3-204ENST00000371725 PHLPP1O60346 1717 aa35.66■■■■□ 3.3
SDCCAG3-204ENST00000371725 RNMTO43148 476 aaKnown RBP35.65■■■■□ 3.3
SDCCAG3-204ENST00000371725 BRPF1P55201 1214 aaPredicted RBP35.63■■■■□ 3.29
SDCCAG3-204ENST00000371725 LARP1Q6PKG0 1096 aaKnown RBP35.63■■■■□ 3.29
SDCCAG3-204ENST00000371725 COL16A1Q07092 1604 aaPredicted RBP35.62■■■■□ 3.29
SDCCAG3-204ENST00000371725 UPF2Q9HAU5 1272 aaKnown RBP35.62■■■■□ 3.29
SDCCAG3-204ENST00000371725 TMEM57Q8N5G2 664 aa35.61■■■■□ 3.29
SDCCAG3-204ENST00000371725 KCNQ3O43525 872 aa35.6■■■■□ 3.29
SDCCAG3-204ENST00000371725 TBC1D32Q96NH3 1257 aa35.6■■■■□ 3.29
SDCCAG3-204ENST00000371725 IPO8O15397 1037 aaKnown RBP35.6■■■■□ 3.29
SDCCAG3-204ENST00000371725 TOM1O60784 492 aa35.6■■■■□ 3.29
SDCCAG3-204ENST00000371725 COL22A1Q8NFW1 1626 aaPredicted RBP35.59■■■■□ 3.29
SDCCAG3-204ENST00000371725 TEFQ10587 303 aa35.59■■■■□ 3.29
SDCCAG3-204ENST00000371725 BTG4Q9NY30 223 aa35.59■■■■□ 3.29
SDCCAG3-204ENST00000371725 EVA1CP58658 441 aa35.58■■■■□ 3.29
SDCCAG3-204ENST00000371725 ITPRIPQ8IWB1 547 aa35.58■■■■□ 3.29
SDCCAG3-204ENST00000371725 KDM3BQ7LBC6 1761 aa35.57■■■■□ 3.28
SDCCAG3-204ENST00000371725 PHKG2P15735 406 aa35.57■■■■□ 3.28
SDCCAG3-204ENST00000371725 NECTIN2Q92692 538 aa35.57■■■■□ 3.28
SDCCAG3-204ENST00000371725 SPG7Q9UQ90 795 aa35.57■■■■□ 3.28
SDCCAG3-204ENST00000371725 PKD1L3Q7Z443 1732 aa35.56■■■■□ 3.28
SDCCAG3-204ENST00000371725 UBAP1LF5GYI3 381 aa35.56■■■■□ 3.28
SDCCAG3-204ENST00000371725 AEBP2Q6ZN18 517 aaPredicted RBP35.56■■■■□ 3.28
SDCCAG3-204ENST00000371725 CYP27B1O15528 508 aa35.56■■■■□ 3.28
SDCCAG3-204ENST00000371725 KDM6AO15550 1401 aaPredicted RBP35.55■■■■□ 3.28
SDCCAG3-204ENST00000371725 HDAC1Q13547 482 aaPredicted RBP35.54■■■■□ 3.28
SDCCAG3-204ENST00000371725 BTBD11A6QL63 1104 aa35.54■■■■□ 3.28
SDCCAG3-204ENST00000371725 ADAMTS7Q9UKP4 1686 aa35.54■■■■□ 3.28
SDCCAG3-204ENST00000371725 BABAM1Q9NWV8 329 aa35.53■■■■□ 3.28
SDCCAG3-204ENST00000371725 OVOS2A0A0G2JMS6 1433 aa35.52■■■■□ 3.28
SDCCAG3-204ENST00000371725 SIPA1L3O60292 1781 aaPredicted RBP35.52■■■■□ 3.28
SDCCAG3-204ENST00000371725 CARD10Q9BWT7 1032 aa35.52■■■■□ 3.28
SDCCAG3-204ENST00000371725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.52■■■■□ 3.28
SDCCAG3-204ENST00000371725 SCN11AQ9UI33 1791 aa35.52■■■■□ 3.28
SDCCAG3-204ENST00000371725 SLC4A2P04920 1241 aa35.51■■■■□ 3.27
SDCCAG3-204ENST00000371725 ADAMTS2O95450 1211 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 IFNL2Q8IZJ0 200 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 ARHGAP45Q92619 1136 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 DDX19BQ9UMR2 479 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 EIF4A1P60842 406 aaKnown RBP35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 G2E3Q7L622 706 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 ANTXR1Q9H6X2 564 aa35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 PARP4Q9UKK3 1724 aaKnown RBP35.5■■■■□ 3.27
SDCCAG3-204ENST00000371725 COL14A1Q05707 1796 aaKnown RBP35.49■■■■□ 3.27
SDCCAG3-204ENST00000371725 ABCC4O15439 1325 aa35.46■■■■□ 3.27
SDCCAG3-204ENST00000371725 NUTM2BA6NNL0 878 aaPredicted RBP35.45■■■■□ 3.27
SDCCAG3-204ENST00000371725 NUTM2EB1AL46 878 aaPredicted RBP35.45■■■■□ 3.27
SDCCAG3-204ENST00000371725 NUTM2AQ8IVF1 878 aaPredicted RBP35.45■■■■□ 3.27
SDCCAG3-204ENST00000371725 RGS12O14924 1447 aa35.45■■■■□ 3.27
SDCCAG3-204ENST00000371725 IL2RBP14784 551 aa35.45■■■■□ 3.27
SDCCAG3-204ENST00000371725 BRPF3Q9ULD4 1205 aa35.44■■■■□ 3.26
SDCCAG3-204ENST00000371725 NFATC2IPQ8NCF5 419 aa35.44■■■■□ 3.26
SDCCAG3-204ENST00000371725 ZCRB1Q8TBF4 217 aaKnown RBP35.44■■■■□ 3.26
SDCCAG3-204ENST00000371725 SLC39A6Q13433 755 aa35.42■■■■□ 3.26
SDCCAG3-204ENST00000371725 TBC1D2Q9BYX2 928 aa35.42■■■■□ 3.26
SDCCAG3-204ENST00000371725 API5Q9BZZ5 524 aaKnown RBP35.42■■■■□ 3.26
SDCCAG3-204ENST00000371725 SLC52A2Q9HAB3 445 aa35.42■■■■□ 3.26
SDCCAG3-204ENST00000371725 SMC5Q8IY18 1101 aa35.41■■■■□ 3.26
SDCCAG3-204ENST00000371725 SHANK3Q9BYB0 1731 aa35.41■■■■□ 3.26
SDCCAG3-204ENST00000371725 EIF2S2P20042 333 aaKnown RBP35.41■■■■□ 3.26
SDCCAG3-204ENST00000371725 HDGFL1Q5TGJ6 251 aa35.39■■■■□ 3.26
SDCCAG3-204ENST00000371725 CCDC30Q5VVM6 783 aa35.39■■■■□ 3.26
SDCCAG3-204ENST00000371725 PRAMEF22A3QJZ6 481 aa35.39■■■■□ 3.26
SDCCAG3-204ENST00000371725 DCAF5Q96JK2 942 aa35.39■■■■□ 3.26
SDCCAG3-204ENST00000371725 STK31Q9BXU1 1019 aa35.39■■■■□ 3.26
SDCCAG3-204ENST00000371725 PLEKHG2Q9H7P9 1386 aa35.38■■■■□ 3.26
SDCCAG3-204ENST00000371725 DDX54Q8TDD1 881 aaKnown RBP35.38■■■■□ 3.25
SDCCAG3-204ENST00000371725 ZBTB40Q9NUA8 1239 aa35.38■■■■□ 3.25
SDCCAG3-204ENST00000371725 PLCH1Q4KWH8 1693 aa35.38■■■■□ 3.25
SDCCAG3-204ENST00000371725 SLKQ9H2G2 1235 aaPredicted RBP35.37■■■■□ 3.25
SDCCAG3-204ENST00000371725 PCDH11XQ9BZA7 1347 aa35.36■■■■□ 3.25
SDCCAG3-204ENST00000371725 PCDH11YQ9BZA8 1340 aa35.36■■■■□ 3.25
SDCCAG3-204ENST00000371725 F6X3S4 739 aa35.35■■■■□ 3.25
SDCCAG3-204ENST00000371725 ZBTB7BO15156 539 aaPredicted RBP35.35■■■■□ 3.25
SDCCAG3-204ENST00000371725 PTPRCP08575 1304 aa35.35■■■■□ 3.25
SDCCAG3-204ENST00000371725 C1orf115Q9H7X2 142 aa35.33■■■■□ 3.25
SDCCAG3-204ENST00000371725 RTN4Q9NQC3 1192 aaKnown RBP35.32■■■■□ 3.25
SDCCAG3-204ENST00000371725 MRC1P22897 1456 aa35.32■■■■□ 3.24
SDCCAG3-204ENST00000371725 SOS1Q07889 1333 aaPredicted RBP35.32■■■■□ 3.24
SDCCAG3-204ENST00000371725 ZNF790Q6PG37 636 aa35.32■■■■□ 3.24
SDCCAG3-204ENST00000371725 C22orf23Q9BZE7 217 aa35.32■■■■□ 3.24
SDCCAG3-204ENST00000371725 ANXA1P04083 346 aa35.31■■■■□ 3.24
SDCCAG3-204ENST00000371725 FLIIQ13045 1269 aa35.31■■■■□ 3.24
SDCCAG3-204ENST00000371725 PHAXQ9H814 394 aaKnown RBP35.31■■■■□ 3.24
SDCCAG3-204ENST00000371725 GIGYF1O75420 1035 aaPredicted RBP35.3■■■■□ 3.24
SDCCAG3-204ENST00000371725 HSP90AB1P08238 724 aaKnown RBP35.3■■■■□ 3.24
SDCCAG3-204ENST00000371725 CHPF2Q9P2E5 772 aa35.3■■■■□ 3.24
SDCCAG3-204ENST00000371725 HEG1Q9ULI3 1381 aa35.3■■■■□ 3.24
SDCCAG3-204ENST00000371725 CERKQ8TCT0 537 aa35.3■■■■□ 3.24
SDCCAG3-204ENST00000371725 CACNA1FO60840 1977 aa35.29■■■■□ 3.24
SDCCAG3-204ENST00000371725 CABP4P57796 275 aa35.29■■■■□ 3.24
SDCCAG3-204ENST00000371725 INTS3Q68E01 1043 aaKnown RBP35.28■■■■□ 3.24
SDCCAG3-204ENST00000371725 NRAPQ86VF7 1730 aa35.27■■■■□ 3.24
SDCCAG3-204ENST00000371725 SLC4A10Q6U841 1118 aa35.27■■■■□ 3.24
SDCCAG3-204ENST00000371725 FKBP5Q13451 457 aaPredicted RBP35.27■■■■□ 3.24
SDCCAG3-204ENST00000371725 C5P01031 1676 aa35.26■■■■□ 3.24
SDCCAG3-204ENST00000371725 HOXB7P09629 217 aa35.26■■■■□ 3.24
SDCCAG3-204ENST00000371725 NUCB1Q02818 461 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms