RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ADAMTS19Q8TE59 1207 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 LRP6O75581 1613 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 PPIP5K1Q6PFW1 1433 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 VIL1P09327 827 aaKnown RBP5.21□□□□□ -1.58
MCF2-203ENST00000370576 MLLT3P42568 568 aaPredicted RBP5.21□□□□□ -1.58
MCF2-203ENST00000370576 MMP14P50281 582 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 EVA1CP58658 441 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 EIF4G2P78344 907 aaKnown RBP eCLIP5.21□□□□□ -1.58
MCF2-203ENST00000370576 FBXO33Q7Z6M2 555 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 KCNH8Q96L42 1107 aa5.21□□□□□ -1.58
MCF2-203ENST00000370576 ZNF521Q96K83 1311 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 CFAP69A5D8W1 941 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 KIF24Q5T7B8 1368 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 KIF3BO15066 747 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 RAD51AP2Q09MP3 1159 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 PDAP1Q13442 181 aaKnown RBP5.2□□□□□ -1.58
MCF2-203ENST00000370576 KRBA2Q6ZNG9 492 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 GPIHBP1Q8IV16 184 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.2□□□□□ -1.58
MCF2-203ENST00000370576 MORC4Q8TE76 937 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 SSUH2Q9Y2M2 353 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 COL16A1Q07092 1604 aaPredicted RBP5.2□□□□□ -1.58
MCF2-203ENST00000370576 CCDC96Q2M329 555 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 STAG1Q8WVM7 1258 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 RGPD2P0DJD1 1756 aa5.2□□□□□ -1.58
MCF2-203ENST00000370576 IBTKQ9P2D0 1353 aaPredicted RBP5.2□□□□□ -1.58
MCF2-203ENST00000370576 BDNFP23560 247 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 IDI1Q13907 227 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 RGPD5Q99666 1765 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 SPDYE2BA6NHP3 402 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 SPDYE5A6NIY4 337 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 SPDYE6P0CI01 402 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 SPDYE2Q495Y8 402 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 EDC4Q6P2E9 1401 aaKnown RBP5.19□□□□□ -1.58
MCF2-203ENST00000370576 MRC1P22897 1456 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 PXDNQ92626 1479 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 NAALADL2Q58DX5 795 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 VTI1AQ96AJ9 217 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.19□□□□□ -1.58
MCF2-203ENST00000370576 NRBP1Q9UHY1 535 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 METP08581 1390 aa5.19□□□□□ -1.58
MCF2-203ENST00000370576 ADGRL3Q9HAR2 1447 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.18□□□□□ -1.58
MCF2-203ENST00000370576 SMYD5Q6GMV2 418 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 RINLQ6ZS11 566 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 WWC1Q8IX03 1113 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 CIZ1Q9ULV3 898 aaPredicted RBP5.18□□□□□ -1.58
MCF2-203ENST00000370576 COL24A1Q17RW2 1714 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 CREB3O43889 395 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 REPIN1Q9BWE0 567 aaKnown RBP5.18□□□□□ -1.58
MCF2-203ENST00000370576 ATP1B4Q9UN42 357 aaPredicted RBP5.18□□□□□ -1.58
MCF2-203ENST00000370576 C5P01031 1676 aa5.18□□□□□ -1.58
MCF2-203ENST00000370576 STK25O00506 426 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 DIEXFQ68CQ4 756 aaKnown RBP5.17□□□□□ -1.58
MCF2-203ENST00000370576 TRMT2AQ8IZ69 625 aaKnown RBP5.17□□□□□ -1.58
MCF2-203ENST00000370576 LNPKQ9C0E8 428 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 PRKRIP1Q9H875 184 aaPredicted RBP5.17□□□□□ -1.58
MCF2-203ENST00000370576 GNL3LQ9NVN8 582 aaKnown RBP5.17□□□□□ -1.58
MCF2-203ENST00000370576 OVOS2A0A0G2JMS6 1433 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 ATAD2Q6PL18 1390 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 POM121CA8CG34 1229 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 NBPF1Q3BBV0 1214 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 JADE2Q9NQC1 790 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 STK24Q9Y6E0 443 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 RGPD3A6NKT7 1758 aaPredicted RBP5.17□□□□□ -1.58
MCF2-203ENST00000370576 RGPD4Q7Z3J3 1758 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 GORABQ5T7V8 394 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 TINF2Q9BSI4 451 aa5.17□□□□□ -1.58
MCF2-203ENST00000370576 MINK1Q8N4C8 1332 aaPredicted RBP5.16□□□□□ -1.58
MCF2-203ENST00000370576 SF3A1Q15459 793 aaKnown RBP5.16□□□□□ -1.58
MCF2-203ENST00000370576 PIF1Q9H611 641 aa5.16□□□□□ -1.58
MCF2-203ENST00000370576 NUP188Q5SRE5 1749 aa5.16□□□□□ -1.58
MCF2-203ENST00000370576 GPR37L1O60883 481 aa5.16□□□□□ -1.58
MCF2-203ENST00000370576 ROBO2Q9HCK4 1378 aa5.16□□□□□ -1.58
MCF2-203ENST00000370576 FGAP02671 866 aa5.15□□□□□ -1.58
MCF2-203ENST00000370576 CCDC184Q52MB2 194 aa5.15□□□□□ -1.58
MCF2-203ENST00000370576 C11orf96Q7Z7L8 435 aa5.15□□□□□ -1.58
MCF2-203ENST00000370576 PCGF5Q86SE9 256 aa5.15□□□□□ -1.58
MCF2-203ENST00000370576 BANK1Q8NDB2 785 aa5.15□□□□□ -1.58
MCF2-203ENST00000370576 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.59
MCF2-203ENST00000370576 ARID4AP29374 1257 aaPredicted RBP5.15□□□□□ -1.59
MCF2-203ENST00000370576 RBL2Q08999 1139 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 TCEAL1Q15170 157 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 EPAS1Q99814 870 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 SLAIN2Q9P270 581 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 TOGARAM1Q9Y4F4 1720 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 IRF6O14896 467 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 PAX3P23760 479 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 FTSJ3Q8IY81 847 aaKnown RBP5.15□□□□□ -1.59
MCF2-203ENST00000370576 SLC43A3Q8NBI5 491 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 GLMNQ92990 594 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 CCDC102AQ96A19 550 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 CHPF2Q9P2E5 772 aa5.15□□□□□ -1.59
MCF2-203ENST00000370576 USP6P35125 1406 aa5.14□□□□□ -1.59
MCF2-203ENST00000370576 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.14□□□□□ -1.59
MCF2-203ENST00000370576 GMLQ99445 158 aa5.14□□□□□ -1.59
MCF2-203ENST00000370576 MFRPQ9BY79 579 aa5.14□□□□□ -1.59
MCF2-203ENST00000370576 QSER1Q2KHR3 1735 aa5.14□□□□□ -1.59
MCF2-203ENST00000370576 COL14A1Q05707 1796 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms