RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 EDC4Q6P2E9 1401 aaKnown RBP21.24■□□□□ 0.99
CHTOP-203ENST00000368690 SYAP1Q96A49 352 aaPredicted RBP21.23■□□□□ 0.99
CHTOP-203ENST00000368690 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
CHTOP-203ENST00000368690 NME9Q86XW9 330 aa21.22■□□□□ 0.99
CHTOP-203ENST00000368690 PLEKHG3A1L390 1219 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 ERC2O15083 957 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 ADGRL3Q9HAR2 1447 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 BRD1O95696 1058 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 POLKQ9UBT6 870 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 AKAP12Q02952 1782 aa21.21■□□□□ 0.99
CHTOP-203ENST00000368690 DLG5Q8TDM6 1919 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
CHTOP-203ENST00000368690 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 MON2Q7Z3U7 1717 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 PHF14O94880 888 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 CUL4AQ13619 759 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 UVSSAQ2YD98 709 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 MYRIPQ8NFW9 859 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 INTS4Q96HW7 963 aaKnown RBP21.2■□□□□ 0.98
CHTOP-203ENST00000368690 PRIMPOLQ96LW4 560 aa21.2■□□□□ 0.98
CHTOP-203ENST00000368690 MAP2P11137 1827 aaKnown RBP21.19■□□□□ 0.98
CHTOP-203ENST00000368690 FMN2Q9NZ56 1722 aa21.19■□□□□ 0.98
CHTOP-203ENST00000368690 KLHL34Q8N239 644 aa21.19■□□□□ 0.98
CHTOP-203ENST00000368690 FAM184AQ8NB25 1140 aa21.19■□□□□ 0.98
CHTOP-203ENST00000368690 OSBPL3Q9H4L5 887 aa21.19■□□□□ 0.98
CHTOP-203ENST00000368690 C16orf71Q8IYS4 520 aaPredicted RBP21.19■□□□□ 0.98
CHTOP-203ENST00000368690 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
CHTOP-203ENST00000368690 CDK12Q9NYV4 1490 aaPredicted RBP21.18■□□□□ 0.98
CHTOP-203ENST00000368690 C8orf58Q8NAV2 365 aa21.18■□□□□ 0.98
CHTOP-203ENST00000368690 CCDC94Q9BW85 323 aaPredicted RBP21.18■□□□□ 0.98
CHTOP-203ENST00000368690 NSFL1CQ9UNZ2 370 aaKnown RBP21.18■□□□□ 0.98
CHTOP-203ENST00000368690 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
CHTOP-203ENST00000368690 HMGN5P82970 282 aaKnown RBP21.17■□□□□ 0.98
CHTOP-203ENST00000368690 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
CHTOP-203ENST00000368690 THUMPD2Q9BTF0 503 aaKnown RBP21.17■□□□□ 0.98
CHTOP-203ENST00000368690 IL17RAQ96F46 866 aa21.17■□□□□ 0.98
CHTOP-203ENST00000368690 COG3Q96JB2 828 aa21.17■□□□□ 0.98
CHTOP-203ENST00000368690 RGS12O14924 1447 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 GTF2F1P35269 517 aaKnown RBP eCLIP21.16■□□□□ 0.98
CHTOP-203ENST00000368690 UTP14CQ5TAP6 766 aaKnown RBP21.16■□□□□ 0.98
CHTOP-203ENST00000368690 TMX3Q96JJ7 454 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 USP6P35125 1406 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 FBLN1P23142 703 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 STRCQ7RTU9 1775 aa21.16■□□□□ 0.98
CHTOP-203ENST00000368690 IL13P35225 146 aa21.15■□□□□ 0.98
CHTOP-203ENST00000368690 TTC21BQ7Z4L5 1316 aa21.15■□□□□ 0.98
CHTOP-203ENST00000368690 RTL1A6NKG5 1358 aa21.15■□□□□ 0.98
CHTOP-203ENST00000368690 PTMAP06454 111 aaKnown RBP21.14■□□□□ 0.98
CHTOP-203ENST00000368690 ANAPC15P60006 121 aa21.14■□□□□ 0.98
CHTOP-203ENST00000368690 OTUD7AQ8TE49 926 aaPredicted RBP21.14■□□□□ 0.98
CHTOP-203ENST00000368690 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.98
CHTOP-203ENST00000368690 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
CHTOP-203ENST00000368690 PIBF1Q8WXW3 757 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 PTPRCP08575 1304 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 TMEM94Q12767 1356 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 AATKQ6ZMQ8 1374 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
CHTOP-203ENST00000368690 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
CHTOP-203ENST00000368690 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
CHTOP-203ENST00000368690 HMOX1P09601 288 aa21.12■□□□□ 0.97
CHTOP-203ENST00000368690 NEK4P51957 841 aa21.12■□□□□ 0.97
CHTOP-203ENST00000368690 HMMRO75330 724 aa21.11■□□□□ 0.97
CHTOP-203ENST00000368690 RNF214Q8ND24 703 aa21.11■□□□□ 0.97
CHTOP-203ENST00000368690 C19orf44Q9H6X5 657 aa21.11■□□□□ 0.97
CHTOP-203ENST00000368690 NRKQ7Z2Y5 1582 aa21.11■□□□□ 0.97
CHTOP-203ENST00000368690 SOX12O15370 315 aa21.1■□□□□ 0.97
CHTOP-203ENST00000368690 MCCP23508 829 aa21.1■□□□□ 0.97
CHTOP-203ENST00000368690 KIAA0232Q92628 1395 aa21.1■□□□□ 0.97
CHTOP-203ENST00000368690 EPB41L2O43491 1005 aaKnown RBP21.1■□□□□ 0.97
CHTOP-203ENST00000368690 TMEM87AQ8NBN3 555 aa21.1■□□□□ 0.97
CHTOP-203ENST00000368690 ATF3P18847 181 aa21.09■□□□□ 0.97
CHTOP-203ENST00000368690 LETM1O95202 739 aaPredicted RBP21.09■□□□□ 0.97
CHTOP-203ENST00000368690 SPTLC3Q9NUV7 552 aa21.09■□□□□ 0.97
CHTOP-203ENST00000368690 PDE1AP54750 535 aa21.08■□□□□ 0.97
CHTOP-203ENST00000368690 DMTNQ08495 405 aa21.08■□□□□ 0.97
CHTOP-203ENST00000368690 ORAI2Q96SN7 254 aa21.08■□□□□ 0.97
CHTOP-203ENST00000368690 MSH6P52701 1360 aa21.08■□□□□ 0.97
CHTOP-203ENST00000368690 ZNF335Q9H4Z2 1342 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-203ENST00000368690 SMARCA5O60264 1052 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-203ENST00000368690 PSME1Q06323 249 aa21.07■□□□□ 0.96
CHTOP-203ENST00000368690 NOLC1Q14978 699 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHTOP-203ENST00000368690 CHAMP1Q96JM3 812 aa21.07■□□□□ 0.96
CHTOP-203ENST00000368690 ESYT1Q9BSJ8 1104 aa21.07■□□□□ 0.96
CHTOP-203ENST00000368690 TTC21AQ8NDW8 1320 aa21.06■□□□□ 0.96
CHTOP-203ENST00000368690 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
CHTOP-203ENST00000368690 RRS1Q15050 365 aaKnown RBP21.06■□□□□ 0.96
CHTOP-203ENST00000368690 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
CHTOP-203ENST00000368690 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
CHTOP-203ENST00000368690 DNTTIP2Q5QJE6 756 aaKnown RBP21.04■□□□□ 0.96
CHTOP-203ENST00000368690 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
CHTOP-203ENST00000368690 FOXO3O43524 673 aa21.04■□□□□ 0.96
CHTOP-203ENST00000368690 FKBP5Q13451 457 aaPredicted RBP21.04■□□□□ 0.96
CHTOP-203ENST00000368690 CCDC183Q5T5S1 534 aa21.04■□□□□ 0.96
CHTOP-203ENST00000368690 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
CHTOP-203ENST00000368690 NLRP6P59044 892 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms