RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
PTPRK-205ENST00000368213 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
PTPRK-205ENST00000368213 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-205ENST00000368213 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
PTPRK-205ENST00000368213 GCP02774 474 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 BAG6P46379 1132 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
PTPRK-205ENST00000368213 FEZ1Q99689 392 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 MAP3K2Q9Y2U5 619 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 ODF2Q5BJF6 829 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
PTPRK-205ENST00000368213 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
PTPRK-205ENST00000368213 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
PTPRK-205ENST00000368213 JDP2Q8WYK2 163 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-205ENST00000368213 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPRK-205ENST00000368213 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 LDHCP07864 332 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 CTTNBP2Q8WZ74 1663 aa12.78□□□□□ -0.36
PTPRK-205ENST00000368213 FBLN1P23142 703 aa12.77□□□□□ -0.36
PTPRK-205ENST00000368213 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.36
PTPRK-205ENST00000368213 OGFOD1Q8N543 542 aa12.77□□□□□ -0.36
PTPRK-205ENST00000368213 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.36
PTPRK-205ENST00000368213 NYXQ9GZU5 481 aa12.77□□□□□ -0.36
PTPRK-205ENST00000368213 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
PTPRK-205ENST00000368213 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-205ENST00000368213 F6X3S4 739 aa12.77□□□□□ -0.37
PTPRK-205ENST00000368213 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
PTPRK-205ENST00000368213 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
PTPRK-205ENST00000368213 TRPM2O94759 1503 aa12.77□□□□□ -0.37
PTPRK-205ENST00000368213 CCDC96Q2M329 555 aa12.77□□□□□ -0.37
PTPRK-205ENST00000368213 NEK4P51957 841 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 STK3Q13188 491 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 GNPATO15228 680 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 NF2P35240 595 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
PTPRK-205ENST00000368213 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-205ENST00000368213 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
PTPRK-205ENST00000368213 NAPBQ9H115 298 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTPRK-205ENST00000368213 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
PTPRK-205ENST00000368213 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 OFD1O75665 1012 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-205ENST00000368213 SPTY2D1Q68D10 685 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-205ENST00000368213 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 UBE3BQ7Z3V4 1068 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 ZFYVE27Q5T4F4 411 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
PTPRK-205ENST00000368213 SCLT1Q96NL6 688 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 APBA3O96018 575 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 BAG3O95817 575 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 NUCB2P80303 420 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 FLIIQ13045 1269 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 TNIP1Q15025 636 aa12.75□□□□□ -0.37
PTPRK-205ENST00000368213 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-205ENST00000368213 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
PTPRK-205ENST00000368213 CDKL5O76039 1030 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 PDCP20941 246 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
PTPRK-205ENST00000368213 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
PTPRK-205ENST00000368213 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
PTPRK-205ENST00000368213 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
PTPRK-205ENST00000368213 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■■■□□ 19
PTPRK-205ENST00000368213 STK38Q15208 465 aa12.73□□□□□ -0.37
PTPRK-205ENST00000368213 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
PTPRK-205ENST00000368213 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
PTPRK-205ENST00000368213 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-205ENST00000368213 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms