RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 AMER1Q5JTC6 1135 aaPredicted RBP20.17■□□□□ 0.82
CTSD-202ENST00000367196 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
CTSD-202ENST00000367196 KDRP35968 1356 aa20.17■□□□□ 0.82
CTSD-202ENST00000367196 NLGN2Q8NFZ4 835 aa20.16■□□□□ 0.82
CTSD-202ENST00000367196 ATG3Q9NT62 314 aa20.16■□□□□ 0.82
CTSD-202ENST00000367196 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
CTSD-202ENST00000367196 GNPATO15228 680 aa20.15■□□□□ 0.82
CTSD-202ENST00000367196 GRIN3BO60391 1043 aa20.15■□□□□ 0.82
CTSD-202ENST00000367196 CABP4P57796 275 aa20.15■□□□□ 0.82
CTSD-202ENST00000367196 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
CTSD-202ENST00000367196 ZNF784Q8NCA9 323 aaPredicted RBP20.15■□□□□ 0.82
CTSD-202ENST00000367196 MTHFSP49914 203 aa20.14■□□□□ 0.81
CTSD-202ENST00000367196 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
CTSD-202ENST00000367196 IL13P35225 146 aa20.13■□□□□ 0.81
CTSD-202ENST00000367196 AEBP1Q8IUX7 1158 aa20.13■□□□□ 0.81
CTSD-202ENST00000367196 ITPK1Q13572 414 aa20.12■□□□□ 0.81
CTSD-202ENST00000367196 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
CTSD-202ENST00000367196 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
CTSD-202ENST00000367196 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
CTSD-202ENST00000367196 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
CTSD-202ENST00000367196 ADRA2BP18089 450 aa20.1■□□□□ 0.81
CTSD-202ENST00000367196 AMIGO3Q86WK7 504 aa20.1■□□□□ 0.81
CTSD-202ENST00000367196 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
CTSD-202ENST00000367196 SCN11AQ9UI33 1791 aa20.09■□□□□ 0.81
CTSD-202ENST00000367196 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
CTSD-202ENST00000367196 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
CTSD-202ENST00000367196 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
CTSD-202ENST00000367196 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.8
CTSD-202ENST00000367196 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
CTSD-202ENST00000367196 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
CTSD-202ENST00000367196 CICQ96RK0 1608 aaPredicted RBP20.06■□□□□ 0.8
CTSD-202ENST00000367196 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
CTSD-202ENST00000367196 YBX3P16989 372 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■□□□ 12
CTSD-202ENST00000367196 NLGN1Q8N2Q7 840 aa20.05■□□□□ 0.8
CTSD-202ENST00000367196 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
CTSD-202ENST00000367196 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
CTSD-202ENST00000367196 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
CTSD-202ENST00000367196 PTCD1O75127 700 aaKnown RBP20.03■□□□□ 0.8
CTSD-202ENST00000367196 RPS6KA4O75676 772 aa20.03■□□□□ 0.8
CTSD-202ENST00000367196 RFC4P35249 363 aa20.03■□□□□ 0.8
CTSD-202ENST00000367196 MRC1P22897 1456 aa20.03■□□□□ 0.8
CTSD-202ENST00000367196 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
CTSD-202ENST00000367196 MMP10P09238 476 aa20.02■□□□□ 0.8
CTSD-202ENST00000367196 HMOX1P09601 288 aa20.02■□□□□ 0.8
CTSD-202ENST00000367196 C4AP0C0L4 1744 aa20.02■□□□□ 0.79
CTSD-202ENST00000367196 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
CTSD-202ENST00000367196 SLC52A2Q9HAB3 445 aa20.01■□□□□ 0.79
CTSD-202ENST00000367196 KIF13BQ9NQT8 1826 aa20.01■□□□□ 0.79
CTSD-202ENST00000367196 TJP1Q07157 1748 aa20.01■□□□□ 0.79
CTSD-202ENST00000367196 MYH14Q7Z406 1995 aaKnown RBP20■□□□□ 0.79
CTSD-202ENST00000367196 CRKLP46109 303 aaKnown RBP19.99■□□□□ 0.79
CTSD-202ENST00000367196 ADAMTS7Q9UKP4 1686 aa19.98■□□□□ 0.79
CTSD-202ENST00000367196 GIGYF1O75420 1035 aaPredicted RBP19.98■□□□□ 0.79
CTSD-202ENST00000367196 CCDC87Q9NVE4 849 aa19.98■□□□□ 0.79
CTSD-202ENST00000367196 PARP3Q9Y6F1 533 aa19.98■□□□□ 0.79
CTSD-202ENST00000367196 RNMTO43148 476 aaKnown RBP19.97■□□□□ 0.79
CTSD-202ENST00000367196 GYS1P13807 737 aa19.97■□□□□ 0.79
CTSD-202ENST00000367196 TGFB2P61812 414 aa19.97■□□□□ 0.79
CTSD-202ENST00000367196 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
CTSD-202ENST00000367196 C10orf71Q711Q0 1435 aa19.96■□□□□ 0.79
CTSD-202ENST00000367196 U2SURPO15042 1029 aaKnown RBP19.96■□□□□ 0.79
CTSD-202ENST00000367196 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
CTSD-202ENST00000367196 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
CTSD-202ENST00000367196 C1QTNF8P60827 252 aa19.95■□□□□ 0.78
CTSD-202ENST00000367196 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
CTSD-202ENST00000367196 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
CTSD-202ENST00000367196 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
CTSD-202ENST00000367196 LGR6Q9HBX8 967 aa19.94■□□□□ 0.78
CTSD-202ENST00000367196 VSIG10Q8N0Z9 540 aa19.93■□□□□ 0.78
CTSD-202ENST00000367196 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
CTSD-202ENST00000367196 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
CTSD-202ENST00000367196 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
CTSD-202ENST00000367196 TTC5Q8N0Z6 440 aa19.92■□□□□ 0.78
CTSD-202ENST00000367196 KIAA1551Q9HCM1 1747 aa19.92■□□□□ 0.78
CTSD-202ENST00000367196 UBR2Q8IWV8 1755 aa19.92■□□□□ 0.78
CTSD-202ENST00000367196 N4BP2Q86UW6 1770 aaPredicted RBP19.91■□□□□ 0.78
CTSD-202ENST00000367196 ZPR1O75312 459 aa19.91■□□□□ 0.78
CTSD-202ENST00000367196 DNAJC10Q8IXB1 793 aa19.91■□□□□ 0.78
CTSD-202ENST00000367196 GNAT3A8MTJ3 354 aa19.9■□□□□ 0.78
CTSD-202ENST00000367196 TEFQ10587 303 aa19.9■□□□□ 0.78
CTSD-202ENST00000367196 INTS5Q6P9B9 1019 aaKnown RBP19.9■□□□□ 0.78
CTSD-202ENST00000367196 WWC3Q9ULE0 1092 aa19.9■□□□□ 0.78
CTSD-202ENST00000367196 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
CTSD-202ENST00000367196 ADCY9O60503 1353 aa19.9■□□□□ 0.78
CTSD-202ENST00000367196 SOS1Q07889 1333 aaPredicted RBP19.89■□□□□ 0.77
CTSD-202ENST00000367196 SLC39A6Q13433 755 aa19.89■□□□□ 0.77
CTSD-202ENST00000367196 GPBP1L1Q9HC44 474 aaPredicted RBP19.89■□□□□ 0.77
CTSD-202ENST00000367196 COL15A1P39059 1388 aa19.88■□□□□ 0.77
CTSD-202ENST00000367196 CYP19A1P11511 503 aaPredicted RBP19.88■□□□□ 0.77
CTSD-202ENST00000367196 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
CTSD-202ENST00000367196 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
CTSD-202ENST00000367196 STARD3NLO95772 234 aa19.87■□□□□ 0.77
CTSD-202ENST00000367196 FKBP8Q14318 412 aa19.87■□□□□ 0.77
CTSD-202ENST00000367196 BCS1LQ9Y276 419 aa19.87■□□□□ 0.77
CTSD-202ENST00000367196 BRCA1P38398 1863 aaKnown RBP19.87■□□□□ 0.77
CTSD-202ENST00000367196 SIPA1L3O60292 1781 aaPredicted RBP19.86■□□□□ 0.77
CTSD-202ENST00000367196 A0A0G2JLW4 131 aa19.86■□□□□ 0.77
CTSD-202ENST00000367196 DPEP1P16444 411 aa19.85■□□□□ 0.77
CTSD-202ENST00000367196 TEX13AQ9BXU3 409 aaPredicted RBP19.85■□□□□ 0.77
CTSD-202ENST00000367196 NARFQ9UHQ1 456 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms