RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 SLC27A3Q5K4L6 730 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 CCDC102BQ68D86 513 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 PRICKLE2Q7Z3G6 844 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 LARGE2Q8N3Y3 721 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 SRPK2P78362 688 aaKnown RBP6.48□□□□□ -1.37
RNU4-48P-201ENST00000365559 PTK7Q13308 1070 aa6.48□□□□□ -1.37
RNU4-48P-201ENST00000365559 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
RNU4-48P-201ENST00000365559 SIX5Q8N196 739 aa6.48□□□□□ -1.37
RNU4-48P-201ENST00000365559 ZNF358Q9NW07 568 aa6.48□□□□□ -1.37
RNU4-48P-201ENST00000365559 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L15C9J2P7 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L10C9JJH3 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L13C9JLJ4 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L12C9JPN9 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L11C9JVI0 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L21D6R901 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L18D6R9N7 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L22D6RA61 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L17D6RBQ6 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L19D6RCP7 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L20D6RJB6 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 RHOQP17081 205 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 SMTNP53814 917 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 PTSQ03393 145 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 USP17L24Q0WX57 530 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 POU4F2Q12837 409 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 TLR1Q15399 786 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 SLC4A9Q96Q91 983 aa6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
RNU4-48P-201ENST00000365559 SENP3-EIF4A1A0A087X0R7 540 aa6.46□□□□□ -1.38
RNU4-48P-201ENST00000365559 FAM196BA6NMK8 535 aa6.46□□□□□ -1.38
RNU4-48P-201ENST00000365559 A6NJY4 79 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 SPATA31C2B4DYI2 1134 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 VEGFBP49765 207 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 DPYDQ12882 1025 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 TMEM214Q6NUQ4 689 aaKnown RBP6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 NBPF10Q6P3W6 841 aaKnown RBP6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 NBPF15Q8N660 670 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 ZNF775Q96BV0 537 aaPredicted RBP6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 ARXQ96QS3 562 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 USP3Q9Y6I4 520 aa6.45□□□□□ -1.38
RNU4-48P-201ENST00000365559 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 BACH1O14867 736 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 PHKA2P46019 1235 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 EPHA4P54764 986 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 MTFR1Q15390 333 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 ANKMY2Q8IV38 441 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 TSEN2Q8NCE0 465 aaKnown RBP6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 PBXIP1Q96AQ6 731 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 ARID3AQ99856 593 aa6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 NXF1Q9UBU9 619 aaKnown RBP6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 IQSEC3Q9UPP2 1182 aaPredicted RBP6.44□□□□□ -1.38
RNU4-48P-201ENST00000365559 CDK2AP1O14519 115 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 SEC13P55735 322 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 C4orf17Q53FE4 359 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 TBCELQ5QJ74 424 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 TAS1R3Q7RTX0 852 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 CCDC155Q8N6L0 562 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 SCHIP1Q9P0W5 487 aaPredicted RBP6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 ZMIZ1Q9ULJ6 1067 aa6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 NOVA2Q9UNW9 492 aaKnown RBP6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
RNU4-48P-201ENST00000365559 M0R2N6 131 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 TERTO14746 1132 aaKnown RBP6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 PPFIA3O75145 1194 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 LGR5O75473 907 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 GTF2E1P29083 439 aaPredicted RBP6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 FOXK2Q01167 660 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 GNASQ5JWF2 1037 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
RNU4-48P-201ENST00000365559 ATG7O95352 703 aa6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 WDR44Q5JSH3 913 aa6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 SLC9A9Q8IVB4 645 aa6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 STK32AQ8WU08 396 aa6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 TSPAN10Q9H1Z9 355 aaPredicted RBP6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 TIMMDC1Q9NPL8 285 aa6.41□□□□□ -1.38
RNU4-48P-201ENST00000365559 H3BM21 787 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 PLA2G4AP47712 749 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 NFX1Q12986 1120 aaKnown RBP6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 ELOAQ14241 798 aaKnown RBP6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 FAM200AQ8TCP9 573 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 HINFPQ9BQA5 517 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 NIFKQ9BYG3 293 aaKnown RBP6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 CUEDC1Q9NWM3 386 aaPredicted RBP6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 DYRK1BQ9Y463 629 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 PARP3Q9Y6F1 533 aa6.4□□□□□ -1.38
RNU4-48P-201ENST00000365559 C21orf2O43822 256 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 ITGA6P23229 1130 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 NPAS3Q8IXF0 933 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 GAS2L2Q8NHY3 880 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 ZDHHC1Q8WTX9 485 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 GAS2L1Q99501 681 aaPredicted RBP6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 CABP1Q9NZU7 370 aa6.39□□□□□ -1.39
RNU4-48P-201ENST00000365559 FAM69CQ0P6D2 419 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms