RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ERVV-2B6SEH9 535 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 YBX3P16989 372 aaKnown RBP eCLIP11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 ITPK1Q13572 414 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 AMIGO3Q86WK7 504 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 COL5A3P25940 1745 aaPredicted RBP11.17□□□□□ -0.62
RNU4-59P-201ENST00000364447 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
RNU4-59P-201ENST00000364447 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
RNU4-59P-201ENST00000364447 KDRP35968 1356 aa11.16□□□□□ -0.62
RNU4-59P-201ENST00000364447 CABP4P57796 275 aa11.15□□□□□ -0.62
RNU4-59P-201ENST00000364447 KDM6AO15550 1401 aaPredicted RBP11.15□□□□□ -0.62
RNU4-59P-201ENST00000364447 SCN11AQ9UI33 1791 aa11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 GIGYF1O75420 1035 aaPredicted RBP11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 MTHFSP49914 203 aa11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 C1QTNF8P60827 252 aa11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 VIRMAQ69YN4 1812 aaKnown RBP11.14□□□□□ -0.63
RNU4-59P-201ENST00000364447 C4AP0C0L4 1744 aa11.13□□□□□ -0.63
RNU4-59P-201ENST00000364447 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
RNU4-59P-201ENST00000364447 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
RNU4-59P-201ENST00000364447 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
RNU4-59P-201ENST00000364447 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 GOLGB1Q14789 3259 aaKnown RBP11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 MMP10P09238 476 aa11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
RNU4-59P-201ENST00000364447 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 N4BP2Q86UW6 1770 aaPredicted RBP11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 ADRA2BP18089 450 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 IL13P35225 146 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 RFC4P35249 363 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 TJP1Q07157 1748 aa11.11□□□□□ -0.63
RNU4-59P-201ENST00000364447 ATP10DQ9P241 1426 aa11.1□□□□□ -0.63
RNU4-59P-201ENST00000364447 RPS6KA4O75676 772 aa11.1□□□□□ -0.63
RNU4-59P-201ENST00000364447 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
RNU4-59P-201ENST00000364447 NFATC2IPQ8NCF5 419 aa11.1□□□□□ -0.63
RNU4-59P-201ENST00000364447 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
RNU4-59P-201ENST00000364447 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
RNU4-59P-201ENST00000364447 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
RNU4-59P-201ENST00000364447 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 HMOX1P09601 288 aa11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 GYS1P13807 737 aa11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 CCDC87Q9NVE4 849 aa11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 C10orf71Q711Q0 1435 aa11.08□□□□□ -0.64
RNU4-59P-201ENST00000364447 MRC1P22897 1456 aa11.07□□□□□ -0.64
RNU4-59P-201ENST00000364447 ADCY9O60503 1353 aa11.07□□□□□ -0.64
RNU4-59P-201ENST00000364447 ZNF526Q8TF50 670 aaPredicted RBP11.07□□□□□ -0.64
RNU4-59P-201ENST00000364447 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
RNU4-59P-201ENST00000364447 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
RNU4-59P-201ENST00000364447 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
RNU4-59P-201ENST00000364447 TGFB2P61812 414 aa11.06□□□□□ -0.64
RNU4-59P-201ENST00000364447 CNGB1Q14028 1251 aaPredicted RBP11.06□□□□□ -0.64
RNU4-59P-201ENST00000364447 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
RNU4-59P-201ENST00000364447 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
RNU4-59P-201ENST00000364447 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
RNU4-59P-201ENST00000364447 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
RNU4-59P-201ENST00000364447 BCS1LQ9Y276 419 aa11.05□□□□□ -0.64
RNU4-59P-201ENST00000364447 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
RNU4-59P-201ENST00000364447 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 ARFGEF1Q9Y6D6 1849 aa11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
RNU4-59P-201ENST00000364447 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 U2SURPO15042 1029 aaKnown RBP11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 ZPR1O75312 459 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 FCHSD2O94868 740 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 DPEP1P16444 411 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 MTHFSDQ2M296 383 aaKnown RBP11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 INTS5Q6P9B9 1019 aaKnown RBP11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
RNU4-59P-201ENST00000364447 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
RNU4-59P-201ENST00000364447 FKBP8Q14318 412 aa11.02□□□□□ -0.65
RNU4-59P-201ENST00000364447 ARHGAP27Q6ZUM4 889 aa11.02□□□□□ -0.65
RNU4-59P-201ENST00000364447 COL15A1P39059 1388 aa11.02□□□□□ -0.65
RNU4-59P-201ENST00000364447 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 CYP19A1P11511 503 aaPredicted RBP11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 DDR1Q08345 913 aa11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 TEFQ10587 303 aa11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
RNU4-59P-201ENST00000364447 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms