RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
RNU6-28P-201ENST00000362378 ICMTO60725 284 aa6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 STAU1O95793 577 aaKnown RBP6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 ERCC3P19447 782 aa6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 ESCO1Q5FWF5 840 aa6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 DNAJC14Q6Y2X3 702 aaPredicted RBP6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 ZNF598Q86UK7 904 aaKnown RBP6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 TNS4Q8IZW8 715 aa6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 SEPT3Q9UH03 358 aa6.43□□□□□ -1.38
RNU6-28P-201ENST00000362378 C21orf2O43822 256 aa6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 FOXK2Q01167 660 aa6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 MTFR1Q15390 333 aa6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 GTF3C2Q8WUA4 911 aaPredicted RBP6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 SCG3Q8WXD2 468 aaKnown RBP6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 ZNF775Q96BV0 537 aaPredicted RBP6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 XAGE2Q96GT9 111 aa6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 ATAD2Q6PL18 1390 aa6.42□□□□□ -1.38
RNU6-28P-201ENST00000362378 ABL1P00519 1130 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 SMTNP53814 917 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 NNTQ13423 1086 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 ZNF697Q5TEC3 545 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 CAPN12Q6ZSI9 719 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 STAG2Q8N3U4 1231 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 MKNK1Q9BUB5 465 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 SCHIP1Q9P0W5 487 aaPredicted RBP6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 SERTAD1Q9UHV2 236 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 HRH3Q9Y5N1 445 aa6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 DNMT3AQ9Y6K1 912 aaPredicted RBP6.41□□□□□ -1.38
RNU6-28P-201ENST00000362378 A6NJY4 79 aa6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 ALDH1A1P00352 501 aa6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 ADH1AP07327 375 aa6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 MARSP56192 900 aaKnown RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 SF3B2Q13435 895 aaKnown RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 ECM1Q16610 540 aa6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 KDF1Q8NAX2 398 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 BIN2Q9UBW5 565 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 V9GY48 417 aaPredicted RBP6.4□□□□□ -1.38
RNU6-28P-201ENST00000362378 H3BRB1 525 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 IL2RAP01589 272 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 NPR3P17342 541 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 ZNF787Q6DD87 383 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 Q6ZVU0 165 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 GLYCTKQ8IVS8 523 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 ESYT1Q9BSJ8 1104 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 TUT1Q9H6E5 874 aaKnown RBP6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 ARHGEF10LQ9HCE6 1279 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 ANO2Q9NQ90 1003 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 WASF2Q9Y6W5 498 aa6.39□□□□□ -1.39
RNU6-28P-201ENST00000362378 A0A1W2PRU2 124 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 CDK2AP1O14519 115 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 PPP1R12BO60237 982 aaPredicted RBP6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 RBM25P49756 843 aaKnown RBP6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 CLN3Q13286 438 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 POTEAQ6S8J7 498 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 SLC9A9Q8IVB4 645 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 HELQQ8TDG4 1101 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 ZNF428Q96B54 188 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 C2orf49Q9BVC5 232 aaPredicted RBP6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 RAB6BQ9NRW1 208 aa6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 IQSEC3Q9UPP2 1182 aaPredicted RBP6.38□□□□□ -1.39
RNU6-28P-201ENST00000362378 RBM47A0AV96 593 aaKnown RBP6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 GDF9O60383 454 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 PTGIRP43119 386 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 ARHGAP4P98171 946 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 FOXC1Q12948 553 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 CBLBQ13191 982 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 NAA30Q147X3 362 aaPredicted RBP6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 CNKSR1Q969H4 720 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 VTI1AQ96AJ9 217 aa6.37□□□□□ -1.39
RNU6-28P-201ENST00000362378 PSMA6P60900 246 aaKnown RBP6.36□□□□□ -1.39
RNU6-28P-201ENST00000362378 CHMP7Q8WUX9 453 aaPredicted RBP6.36□□□□□ -1.39
RNU6-28P-201ENST00000362378 ITPKCQ96DU7 683 aa6.36□□□□□ -1.39
RNU6-28P-201ENST00000362378 PRKD2Q9BZL6 878 aa6.36□□□□□ -1.39
RNU6-28P-201ENST00000362378 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
RNU6-28P-201ENST00000362378 J3QL48 77 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 FAM13AO94988 1023 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 ZIC2O95409 532 aaPredicted RBP6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 HIRAP54198 1017 aaPredicted RBP6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 TLR1Q15399 786 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 TEAD4Q15561 434 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 TBCELQ5QJ74 424 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 C16orf46Q6P387 395 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 NBPF15Q8N660 670 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 TOR4AQ9NXH8 423 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 DCTN4Q9UJW0 460 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 USP3Q9Y6I4 520 aa6.35□□□□□ -1.39
RNU6-28P-201ENST00000362378 TTC24A2A3L6 582 aaPredicted RBP6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 ANKRD33BA6NCL7 494 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 E9PSI1 815 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms