RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 CEP350Q5VT06 3117 aa20.7■□□□□ 0.9
GDPD3-201ENST00000360688 HSPA5P11021 654 aaKnown RBP20.7■□□□□ 0.9
GDPD3-201ENST00000360688 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
GDPD3-201ENST00000360688 PANK3Q9H999 370 aa20.7■□□□□ 0.9
GDPD3-201ENST00000360688 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
GDPD3-201ENST00000360688 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
GDPD3-201ENST00000360688 KDRP35968 1356 aa20.68■□□□□ 0.9
GDPD3-201ENST00000360688 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
GDPD3-201ENST00000360688 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
GDPD3-201ENST00000360688 WWC3Q9ULE0 1092 aa20.67■□□□□ 0.9
GDPD3-201ENST00000360688 COL5A3P25940 1745 aaPredicted RBP20.67■□□□□ 0.9
GDPD3-201ENST00000360688 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
GDPD3-201ENST00000360688 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
GDPD3-201ENST00000360688 ADCY9O60503 1353 aa20.66■□□□□ 0.9
GDPD3-201ENST00000360688 KIF13BQ9NQT8 1826 aa20.65■□□□□ 0.9
GDPD3-201ENST00000360688 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
GDPD3-201ENST00000360688 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
GDPD3-201ENST00000360688 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
GDPD3-201ENST00000360688 MYH14Q7Z406 1995 aaKnown RBP20.64■□□□□ 0.9
GDPD3-201ENST00000360688 MMP10P09238 476 aa20.64■□□□□ 0.89
GDPD3-201ENST00000360688 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.89
GDPD3-201ENST00000360688 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
GDPD3-201ENST00000360688 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
GDPD3-201ENST00000360688 KIAA1551Q9HCM1 1747 aa20.63■□□□□ 0.89
GDPD3-201ENST00000360688 AMOTQ4VCS5 1084 aa20.62■□□□□ 0.89
GDPD3-201ENST00000360688 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
GDPD3-201ENST00000360688 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
GDPD3-201ENST00000360688 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
GDPD3-201ENST00000360688 AEBP1Q8IUX7 1158 aa20.61■□□□□ 0.89
GDPD3-201ENST00000360688 GPBP1L1Q9HC44 474 aaPredicted RBP20.61■□□□□ 0.89
GDPD3-201ENST00000360688 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
GDPD3-201ENST00000360688 CNTNAP4Q9C0A0 1308 aa20.6■□□□□ 0.89
GDPD3-201ENST00000360688 CABP4P57796 275 aa20.6■□□□□ 0.89
GDPD3-201ENST00000360688 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
GDPD3-201ENST00000360688 ARHGEF1Q92888 912 aaKnown RBP20.6■□□□□ 0.89
GDPD3-201ENST00000360688 PXDNLA1KZ92 1463 aa20.6■□□□□ 0.89
GDPD3-201ENST00000360688 ADRA2BP18089 450 aa20.59■□□□□ 0.89
GDPD3-201ENST00000360688 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
GDPD3-201ENST00000360688 RPS6KA4O75676 772 aa20.58■□□□□ 0.89
GDPD3-201ENST00000360688 MTHFSP49914 203 aa20.58■□□□□ 0.89
GDPD3-201ENST00000360688 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.89
GDPD3-201ENST00000360688 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
GDPD3-201ENST00000360688 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.88
GDPD3-201ENST00000360688 C10orf71Q711Q0 1435 aa20.57■□□□□ 0.88
GDPD3-201ENST00000360688 GYS1P13807 737 aa20.56■□□□□ 0.88
GDPD3-201ENST00000360688 RFC4P35249 363 aa20.56■□□□□ 0.88
GDPD3-201ENST00000360688 TGFB2P61812 414 aa20.56■□□□□ 0.88
GDPD3-201ENST00000360688 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
GDPD3-201ENST00000360688 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
GDPD3-201ENST00000360688 PTCD1O75127 700 aaKnown RBP20.55■□□□□ 0.88
GDPD3-201ENST00000360688 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
GDPD3-201ENST00000360688 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
GDPD3-201ENST00000360688 A0A0G2JLW4 131 aa20.54■□□□□ 0.88
GDPD3-201ENST00000360688 IL13P35225 146 aa20.54■□□□□ 0.88
GDPD3-201ENST00000360688 TJP1Q07157 1748 aa20.54■□□□□ 0.88
GDPD3-201ENST00000360688 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
GDPD3-201ENST00000360688 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
GDPD3-201ENST00000360688 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
GDPD3-201ENST00000360688 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
GDPD3-201ENST00000360688 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.87
GDPD3-201ENST00000360688 BCS1LQ9Y276 419 aa20.52■□□□□ 0.87
GDPD3-201ENST00000360688 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.87
GDPD3-201ENST00000360688 DPEP1P16444 411 aa20.51■□□□□ 0.87
GDPD3-201ENST00000360688 SRP68Q9UHB9 627 aaKnown RBP20.5■□□□□ 0.87
GDPD3-201ENST00000360688 ARFGEF1Q9Y6D6 1849 aa20.49■□□□□ 0.87
GDPD3-201ENST00000360688 KIF3CO14782 793 aa20.49■□□□□ 0.87
GDPD3-201ENST00000360688 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
GDPD3-201ENST00000360688 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
GDPD3-201ENST00000360688 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
GDPD3-201ENST00000360688 HSPA6P17066 643 aa20.48■□□□□ 0.87
GDPD3-201ENST00000360688 FCHSD2O94868 740 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 KCNA3P22001 575 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 FKBP8Q14318 412 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 INTS5Q6P9B9 1019 aaKnown RBP20.47■□□□□ 0.87
GDPD3-201ENST00000360688 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
GDPD3-201ENST00000360688 KIF7Q2M1P5 1343 aa20.46■□□□□ 0.87
GDPD3-201ENST00000360688 MRC1P22897 1456 aa20.45■□□□□ 0.86
GDPD3-201ENST00000360688 HMOX1P09601 288 aa20.45■□□□□ 0.86
GDPD3-201ENST00000360688 DDR1Q08345 913 aa20.45■□□□□ 0.86
GDPD3-201ENST00000360688 DNAJC10Q8IXB1 793 aa20.45■□□□□ 0.86
GDPD3-201ENST00000360688 RNMTO43148 476 aaKnown RBP20.43■□□□□ 0.86
GDPD3-201ENST00000360688 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
GDPD3-201ENST00000360688 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
GDPD3-201ENST00000360688 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
GDPD3-201ENST00000360688 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
GDPD3-201ENST00000360688 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
GDPD3-201ENST00000360688 CYP19A1P11511 503 aaPredicted RBP20.41■□□□□ 0.86
GDPD3-201ENST00000360688 TM4SF1P30408 202 aa20.41■□□□□ 0.86
GDPD3-201ENST00000360688 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
GDPD3-201ENST00000360688 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
GDPD3-201ENST00000360688 AFDNP55196 1824 aaKnown RBP20.4■□□□□ 0.86
GDPD3-201ENST00000360688 ZPR1O75312 459 aa20.4■□□□□ 0.86
GDPD3-201ENST00000360688 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
GDPD3-201ENST00000360688 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.85
GDPD3-201ENST00000360688 DIAPH1O60610 1272 aaKnown RBP20.39■□□□□ 0.85
GDPD3-201ENST00000360688 SBF1O95248 1867 aa20.39■□□□□ 0.85
GDPD3-201ENST00000360688 CHRNA5P30532 468 aa20.38■□□□□ 0.85
GDPD3-201ENST00000360688 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms