RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 FGFR1OPO95684 399 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 GTF2F1P35269 517 aaKnown RBP eCLIP20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 FBF1Q8TES7 1133 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 NAA15Q9BXJ9 866 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 ESPNB1AK53 854 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 PSMC4P43686 418 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 TOP1P11387 765 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 ALS2CR12Q96Q35 445 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 CCDC6Q16204 474 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 FERMT1Q9BQL6 677 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 MYL6BP14649 208 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 BBXQ8WY36 941 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 TDRD12Q587J7 1177 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 JAKMIP1Q96N16 626 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 CCDC96Q2M329 555 aa20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 CEP112Q8N8E3 955 aa20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 SUDS3Q9H7L9 328 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 NOL3O60936 208 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 GCC1Q96CN9 775 aa20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 AACSQ86V21 672 aa20.02■□□□□ 0.8
CACNA1A-201ENST00000360228 LRP2BPQ9P2M1 347 aa20.02■□□□□ 0.8
CACNA1A-201ENST00000360228 HSPA4P34932 840 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 SOGA1O94964 1423 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 CLIP2Q9UDT6 1046 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 CEP83Q9Y592 693 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 C16orf45Q96MC5 204 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 ATP2C2O75185 946 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 NOP2P46087 812 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 ABTB2Q8N961 1025 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 JADE2Q9NQC1 790 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 STRN4Q9NRL3 753 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 TRMT1Q9NXH9 659 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 PUF60Q9UHX1 559 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 CTNNA3Q9UI47 895 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 LIG1P18858 919 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ANKS4BQ8N8V4 417 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 HSF2BPO75031 334 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 IQCGQ9H095 443 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 IVLP07476 585 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 TPD52P55327 224 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 POTEB2H3BUK9 544 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 MAP7D1Q3KQU3 841 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 SPTY2D1Q68D10 685 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 RGS22Q8NE09 1264 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZSCAN30Q86W11 494 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZNF287Q9HBT7 754 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ODF2LQ9ULJ1 636 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CETN1Q12798 172 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZNF354CQ86Y25 554 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 YEATS4O95619 227 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CCT4P50991 539 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 KRT32Q14532 448 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CA8P35219 290 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ACTN2P35609 894 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 OTUD6BQ8N6M0 293 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ANO10Q9NW15 660 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ANAPC4Q9UJX5 808 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 KIF4AO95239 1232 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 RAB34Q9BZG1 259 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 CCDC183Q5T5S1 534 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 GTPBP4Q9BZE4 634 aaKnown RBP19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TTC36A6NLP5 189 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CABP4P57796 275 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CCDC155Q8N6L0 562 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 MIPOL1Q8TD10 442 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TMEM266Q2M3C6 531 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CPLX3Q8WVH0 158 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 NSRP1Q9H0G5 558 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 SARNPP82979 210 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 HDGFL1Q5TGJ6 251 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 FAM184BQ9ULE4 1060 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 SYNCQ9H7C4 482 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 FEZ2Q9UHY8 353 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms