RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 FGFR1OPO95684 399 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 GTF2F1P35269 517 aaKnown RBP eCLIP20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 FBF1Q8TES7 1133 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 NAA15Q9BXJ9 866 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 ESPNB1AK53 854 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 PSMC4P43686 418 aa20.06■□□□□ 0.8
CACNA1A-201ENST00000360228 TOP1P11387 765 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 ALS2CR12Q96Q35 445 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 CCDC6Q16204 474 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 FERMT1Q9BQL6 677 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 MYL6BP14649 208 aa20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 BBXQ8WY36 941 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-201ENST00000360228 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 TDRD12Q587J7 1177 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 JAKMIP1Q96N16 626 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 CCDC96Q2M329 555 aa20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-201ENST00000360228 CEP112Q8N8E3 955 aa20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 SUDS3Q9H7L9 328 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 NOL3O60936 208 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 GCC1Q96CN9 775 aa20.03■□□□□ 0.8
CACNA1A-201ENST00000360228 AACSQ86V21 672 aa20.02■□□□□ 0.8
CACNA1A-201ENST00000360228 LRP2BPQ9P2M1 347 aa20.02■□□□□ 0.8
CACNA1A-201ENST00000360228 HSPA4P34932 840 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 SOGA1O94964 1423 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 CLIP2Q9UDT6 1046 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 CEP83Q9Y592 693 aa20.02■□□□□ 0.79
CACNA1A-201ENST00000360228 C16orf45Q96MC5 204 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 ATP2C2O75185 946 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
CACNA1A-201ENST00000360228 NOP2P46087 812 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 ABTB2Q8N961 1025 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 JADE2Q9NQC1 790 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 STRN4Q9NRL3 753 aa20■□□□□ 0.79
CACNA1A-201ENST00000360228 TRMT1Q9NXH9 659 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 PUF60Q9UHX1 559 aaKnown RBP20■□□□□ 0.79
CACNA1A-201ENST00000360228 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 CTNNA3Q9UI47 895 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 LIG1P18858 919 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ANKS4BQ8N8V4 417 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 HSF2BPO75031 334 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
CACNA1A-201ENST00000360228 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 IQCGQ9H095 443 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 IVLP07476 585 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 TPD52P55327 224 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
CACNA1A-201ENST00000360228 POTEB2H3BUK9 544 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 MAP7D1Q3KQU3 841 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 SPTY2D1Q68D10 685 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 RGS22Q8NE09 1264 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZSCAN30Q86W11 494 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZNF287Q9HBT7 754 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ODF2LQ9ULJ1 636 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CETN1Q12798 172 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 ZNF354CQ86Y25 554 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 YEATS4O95619 227 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CCT4P50991 539 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 KRT32Q14532 448 aa19.97■□□□□ 0.79
CACNA1A-201ENST00000360228 CA8P35219 290 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ACTN2P35609 894 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 OTUD6BQ8N6M0 293 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ANO10Q9NW15 660 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 ANAPC4Q9UJX5 808 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 KIF4AO95239 1232 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 RAB34Q9BZG1 259 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 CCDC183Q5T5S1 534 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
CACNA1A-201ENST00000360228 GTPBP4Q9BZE4 634 aaKnown RBP19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TTC36A6NLP5 189 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CABP4P57796 275 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CCDC155Q8N6L0 562 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 MIPOL1Q8TD10 442 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TMEM266Q2M3C6 531 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 CPLX3Q8WVH0 158 aa19.95■□□□□ 0.78
CACNA1A-201ENST00000360228 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 NSRP1Q9H0G5 558 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 SARNPP82979 210 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 HDGFL1Q5TGJ6 251 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 FAM184BQ9ULE4 1060 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 SYNCQ9H7C4 482 aa19.94■□□□□ 0.78
CACNA1A-201ENST00000360228 FEZ2Q9UHY8 353 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms