RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 SMARCE1Q969G3 411 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 A0A087WZG4 1122 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 PDILTQ8N807 584 aa12.22□□□□□ -0.45
SPTAN1-201ENST00000358161 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-201ENST00000358161 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.45
SPTAN1-201ENST00000358161 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
SPTAN1-201ENST00000358161 WDR62O43379 1518 aa12.21□□□□□ -0.45
SPTAN1-201ENST00000358161 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
SPTAN1-201ENST00000358161 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.46
SPTAN1-201ENST00000358161 USP5P45974 858 aa12.21□□□□□ -0.46
SPTAN1-201ENST00000358161 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.46
SPTAN1-201ENST00000358161 AK7Q96M32 723 aa12.21□□□□□ -0.46
SPTAN1-201ENST00000358161 MX1P20591 662 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 KRT85P78386 507 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 SYCP1Q15431 976 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 LARP1BQ659C4 914 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 FIBPO43427 364 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 DZIP1Q86YF9 867 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 DHX8Q14562 1220 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
SPTAN1-201ENST00000358161 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 ME1P48163 572 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 NASPP49321 788 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 POLR3DP05423 398 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 CCP110O43303 1012 aa12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-201ENST00000358161 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 PRPF40AO75400 957 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 CAVIN1Q6NZI2 390 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 TRIM5Q9C035 493 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 SMC2O95347 1197 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 IL16Q14005 1332 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 CWC25Q9NXE8 425 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 MRE11P49959 708 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 TRAK2O60296 914 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 ZNF76P36508 570 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 CDR1P51861 262 aa12.18□□□□□ -0.46
SPTAN1-201ENST00000358161 MNS1Q8NEH6 495 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 RUFY1Q96T51 708 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 SHANK2Q9UPX8 1470 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 ABCC2Q92887 1545 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 FLIIQ13045 1269 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 NAPBQ9H115 298 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.17□□□□□ -0.462e-7■■■■■ 86.5
SPTAN1-201ENST00000358161 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 ACBD3Q9H3P7 528 aa12.17□□□□□ -0.46
SPTAN1-201ENST00000358161 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 ARGLU1Q9NWB6 273 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 CCDC192P0DO97 292 aa12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 CASTP20810 708 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 HMGB1P09429 215 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 RFC4P35249 363 aa12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 LUC7LQ9NQ29 371 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-201ENST00000358161 ST5P78524 1137 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 TNMDQ9H2S6 317 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 TRAPPC8Q9Y2L5 1435 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 BOLA2Q9H3K6 86 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 TNIP1Q15025 636 aa12.15□□□□□ -0.46
SPTAN1-201ENST00000358161 BACH2Q9BYV9 841 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms