RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 IKBKGQ9Y6K9 419 aa20.27■□□□□ 0.84
ARID1B-202ENST00000346085 FLIIQ13045 1269 aa20.27■□□□□ 0.84
ARID1B-202ENST00000346085 CAVIN2O95810 425 aa20.27■□□□□ 0.83
ARID1B-202ENST00000346085 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.83
ARID1B-202ENST00000346085 TRIM4Q9C037 500 aa20.26■□□□□ 0.83
ARID1B-202ENST00000346085 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
ARID1B-202ENST00000346085 MVPQ14764 893 aaKnown RBP20.26■□□□□ 0.83
ARID1B-202ENST00000346085 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
ARID1B-202ENST00000346085 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
ARID1B-202ENST00000346085 PHLDB2Q86SQ0 1253 aa20.26■□□□□ 0.83
ARID1B-202ENST00000346085 RLBP1P12271 317 aa20.26■□□□□ 0.83
ARID1B-202ENST00000346085 ARHGAP25P42331 645 aa20.26■□□□□ 0.83
ARID1B-202ENST00000346085 TPD52P55327 224 aaPredicted RBP20.26■□□□□ 0.83
ARID1B-202ENST00000346085 SAMD15Q9P1V8 674 aa20.26■□□□□ 0.83
ARID1B-202ENST00000346085 MCM6Q14566 821 aa20.25■□□□□ 0.83
ARID1B-202ENST00000346085 GBP5Q96PP8 586 aa20.25■□□□□ 0.83
ARID1B-202ENST00000346085 LUC7L3O95232 432 aaKnown RBP20.25■□□□□ 0.83
ARID1B-202ENST00000346085 CIB2O75838 187 aa20.25■□□□□ 0.83
ARID1B-202ENST00000346085 CCDC150Q8NCX0 1101 aa20.25■□□□□ 0.83
ARID1B-202ENST00000346085 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
ARID1B-202ENST00000346085 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
ARID1B-202ENST00000346085 SETDB1Q15047 1291 aa20.24■□□□□ 0.83
ARID1B-202ENST00000346085 ANO10Q9NW15 660 aa20.24■□□□□ 0.83
ARID1B-202ENST00000346085 TTC36A6NLP5 189 aa20.24■□□□□ 0.83
ARID1B-202ENST00000346085 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
ARID1B-202ENST00000346085 ZBTB16Q05516 673 aa20.24■□□□□ 0.83
ARID1B-202ENST00000346085 CTCFLQ8NI51 663 aaPredicted RBP20.24■□□□□ 0.83
ARID1B-202ENST00000346085 SOX12O15370 315 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 CEP104O60308 925 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 TUBBP07437 444 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 VPS18Q9P253 973 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 RAD21O60216 631 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 PPP1R12CQ9BZL4 782 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 SATB2Q9UPW6 733 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 TRIM7Q9C029 511 aa20.23■□□□□ 0.83
ARID1B-202ENST00000346085 CTAGE5O15320 804 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 G3BP1Q13283 466 aaKnown RBP eCLIP20.22■□□□□ 0.834e-8■□□□□ 9.8
ARID1B-202ENST00000346085 FAM76AQ8TAV0 307 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 INPP5BP32019 993 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 CPLX4Q7Z7G2 160 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 TSNARE1Q96NA8 513 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 MAP7D1Q3KQU3 841 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 TERF2IPQ9NYB0 399 aa20.22■□□□□ 0.83
ARID1B-202ENST00000346085 CCDC129Q6ZRS4 1044 aa20.21■□□□□ 0.83
ARID1B-202ENST00000346085 NUTM1Q86Y26 1132 aa20.21■□□□□ 0.83
ARID1B-202ENST00000346085 HS1BP3Q53T59 392 aa20.21■□□□□ 0.83
ARID1B-202ENST00000346085 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 LARP1Q6PKG0 1096 aaKnown RBP20.2■□□□□ 0.82
ARID1B-202ENST00000346085 RUFY3Q7L099 469 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 MGEA5O60502 916 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 USP6NLQ92738 828 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 IQCGQ9H095 443 aaKnown RBP20.2■□□□□ 0.82
ARID1B-202ENST00000346085 FKBP15Q5T1M5 1219 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
ARID1B-202ENST00000346085 GMNNO75496 209 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 PRPF31Q8WWY3 499 aaKnown RBP20.2■□□□□ 0.82
ARID1B-202ENST00000346085 DNAI2Q9GZS0 605 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 GOLGA1Q92805 767 aa20.2■□□□□ 0.82
ARID1B-202ENST00000346085 MTUS1Q9ULD2 1270 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
ARID1B-202ENST00000346085 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 SEPT8Q92599 483 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 YEATS4O95619 227 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 LARP1BQ659C4 914 aaKnown RBP20.19■□□□□ 0.82
ARID1B-202ENST00000346085 CYP46A1Q9Y6A2 500 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 ADCY5O95622 1261 aa20.19■□□□□ 0.82
ARID1B-202ENST00000346085 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
ARID1B-202ENST00000346085 TRMT1Q9NXH9 659 aaKnown RBP20.18■□□□□ 0.82
ARID1B-202ENST00000346085 NUF2Q9BZD4 464 aa20.18■□□□□ 0.82
ARID1B-202ENST00000346085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■■■ 35.5
ARID1B-202ENST00000346085 CCDC92Q53HC0 331 aaPredicted RBP20.18■□□□□ 0.82
ARID1B-202ENST00000346085 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
ARID1B-202ENST00000346085 HDXQ7Z353 690 aa20.18■□□□□ 0.82
ARID1B-202ENST00000346085 RASAL2Q9UJF2 1139 aa20.18■□□□□ 0.82
ARID1B-202ENST00000346085 CDKL5O76039 1030 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 TMEM132AQ24JP5 1023 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 ARFGAP2Q8N6H7 521 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 FGFR1OPO95684 399 aaKnown RBP20.17■□□□□ 0.82
ARID1B-202ENST00000346085 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 JADE2Q9NQC1 790 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 CCDC172P0C7W6 258 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 LRRC45Q96CN5 670 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
ARID1B-202ENST00000346085 LRRC23Q53EV4 343 aaPredicted RBP20.16■□□□□ 0.82
ARID1B-202ENST00000346085 PSMC4P43686 418 aa20.16■□□□□ 0.82
ARID1B-202ENST00000346085 MORC4Q8TE76 937 aa20.16■□□□□ 0.82
ARID1B-202ENST00000346085 KIF5AQ12840 1032 aa20.16■□□□□ 0.82
ARID1B-202ENST00000346085 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
ARID1B-202ENST00000346085 CCDC170Q8IYT3 715 aa20.16■□□□□ 0.82
ARID1B-202ENST00000346085 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
ARID1B-202ENST00000346085 ALDH3A1P30838 453 aa20.15■□□□□ 0.82
ARID1B-202ENST00000346085 ERCC3P19447 782 aa20.15■□□□□ 0.82
ARID1B-202ENST00000346085 CCDC65Q8IXS2 484 aa20.15■□□□□ 0.82
ARID1B-202ENST00000346085 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
ARID1B-202ENST00000346085 CTNNBL1Q8WYA6 563 aaPredicted RBP20.15■□□□□ 0.82
ARID1B-202ENST00000346085 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms