RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ATG3Q9NT62 314 aa24.29■■□□□ 1.48
USF2-202ENST00000343550 PHF14O94880 888 aa24.28■■□□□ 1.48
USF2-202ENST00000343550 PPP2R1AP30153 589 aa24.28■■□□□ 1.48
USF2-202ENST00000343550 PLEKHO1Q53GL0 409 aaPredicted RBP24.28■■□□□ 1.48
USF2-202ENST00000343550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.27■■□□□ 1.48
USF2-202ENST00000343550 ATP6V1AP38606 617 aa24.27■■□□□ 1.48
USF2-202ENST00000343550 SMIM5Q71RC9 77 aa24.27■■□□□ 1.48
USF2-202ENST00000343550 DIAPH1O60610 1272 aaKnown RBP24.26■■□□□ 1.47
USF2-202ENST00000343550 HSP90AB1P08238 724 aaKnown RBP24.26■■□□□ 1.47
USF2-202ENST00000343550 ITPK1Q13572 414 aa24.26■■□□□ 1.47
USF2-202ENST00000343550 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
USF2-202ENST00000343550 CHD4Q14839 1912 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 SSFA2P28290 1259 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 CD2APQ9Y5K6 639 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 SULT6B1Q6IMI4 303 aa24.25■■□□□ 1.47
USF2-202ENST00000343550 AEBP1Q8IUX7 1158 aa24.24■■□□□ 1.47
USF2-202ENST00000343550 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
USF2-202ENST00000343550 ZNF530Q6P9A1 599 aaPredicted RBP24.23■■□□□ 1.47
USF2-202ENST00000343550 GNPATO15228 680 aa24.22■■□□□ 1.47
USF2-202ENST00000343550 YBX3P16989 372 aaKnown RBP eCLIP24.22■■□□□ 1.471e-9■□□□□ 10
USF2-202ENST00000343550 UBR3Q6ZT12 1888 aa24.21■■□□□ 1.47
USF2-202ENST00000343550 GRIN3BO60391 1043 aa24.21■■□□□ 1.47
USF2-202ENST00000343550 KDRP35968 1356 aa24.2■■□□□ 1.47
USF2-202ENST00000343550 COL3A1P02461 1466 aaPredicted RBP24.2■■□□□ 1.46
USF2-202ENST00000343550 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
USF2-202ENST00000343550 RBM42Q9BTD8 480 aaKnown RBP24.2■■□□□ 1.46
USF2-202ENST00000343550 CABP4P57796 275 aa24.19■■□□□ 1.46
USF2-202ENST00000343550 C1orf141Q5JVX7 400 aa24.19■■□□□ 1.46
USF2-202ENST00000343550 SLC4A9Q96Q91 983 aa24.19■■□□□ 1.46
USF2-202ENST00000343550 RALBP1Q15311 655 aa24.18■■□□□ 1.46
USF2-202ENST00000343550 KDM6AO15550 1401 aaPredicted RBP24.18■■□□□ 1.46
USF2-202ENST00000343550 HMOX1P09601 288 aa24.17■■□□□ 1.46
USF2-202ENST00000343550 U2SURPO15042 1029 aaKnown RBP24.15■■□□□ 1.46
USF2-202ENST00000343550 RTCBQ9Y3I0 505 aaKnown RBP24.15■■□□□ 1.46
USF2-202ENST00000343550 TRAPPC3LQ5T215 181 aa24.15■■□□□ 1.46
USF2-202ENST00000343550 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
USF2-202ENST00000343550 NFATC2IPQ8NCF5 419 aa24.14■■□□□ 1.45
USF2-202ENST00000343550 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
USF2-202ENST00000343550 PTCD1O75127 700 aaKnown RBP24.1■■□□□ 1.45
USF2-202ENST00000343550 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
USF2-202ENST00000343550 ZNF831Q5JPB2 1677 aa24.1■■□□□ 1.45
USF2-202ENST00000343550 MMP10P09238 476 aa24.1■■□□□ 1.45
USF2-202ENST00000343550 ADRA2BP18089 450 aa24.1■■□□□ 1.45
USF2-202ENST00000343550 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
USF2-202ENST00000343550 RPS6KA4O75676 772 aa24.09■■□□□ 1.45
USF2-202ENST00000343550 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
USF2-202ENST00000343550 NLGN1Q8N2Q7 840 aa24.09■■□□□ 1.45
USF2-202ENST00000343550 C1QTNF8P60827 252 aa24.08■■□□□ 1.45
USF2-202ENST00000343550 PRKRIP1Q9H875 184 aaPredicted RBP24.07■■□□□ 1.44
USF2-202ENST00000343550 U2AF1L5P0DN76 240 aaPredicted RBP24.06■■□□□ 1.44
USF2-202ENST00000343550 RFC4P35249 363 aa24.06■■□□□ 1.44
USF2-202ENST00000343550 U2AF1Q01081 240 aaKnown RBP eCLIP24.06■■□□□ 1.44
USF2-202ENST00000343550 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
USF2-202ENST00000343550 MYBBP1AQ9BQG0 1328 aaKnown RBP24.06■■□□□ 1.44
USF2-202ENST00000343550 MTHFSDQ2M296 383 aaKnown RBP24.05■■□□□ 1.44
USF2-202ENST00000343550 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
USF2-202ENST00000343550 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
USF2-202ENST00000343550 COL5A3P25940 1745 aaPredicted RBP24.04■■□□□ 1.44
USF2-202ENST00000343550 GIGYF1O75420 1035 aaPredicted RBP24.04■■□□□ 1.44
USF2-202ENST00000343550 GYS1P13807 737 aa24.04■■□□□ 1.44
USF2-202ENST00000343550 CRKLP46109 303 aaKnown RBP24.04■■□□□ 1.44
USF2-202ENST00000343550 SLC52A2Q9HAB3 445 aa24.04■■□□□ 1.44
USF2-202ENST00000343550 FCHSD2O94868 740 aa24.03■■□□□ 1.44
USF2-202ENST00000343550 PRKAR2BP31323 418 aa24.01■■□□□ 1.43
USF2-202ENST00000343550 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
USF2-202ENST00000343550 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
USF2-202ENST00000343550 TGFB2P61812 414 aa24■■□□□ 1.43
USF2-202ENST00000343550 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
USF2-202ENST00000343550 MYH14Q7Z406 1995 aaKnown RBP23.99■■□□□ 1.43
USF2-202ENST00000343550 PARP3Q9Y6F1 533 aa23.99■■□□□ 1.43
USF2-202ENST00000343550 CICQ96RK0 1608 aaPredicted RBP23.98■■□□□ 1.43
USF2-202ENST00000343550 INTS5Q6P9B9 1019 aaKnown RBP23.98■■□□□ 1.43
USF2-202ENST00000343550 CCDC87Q9NVE4 849 aa23.98■■□□□ 1.43
USF2-202ENST00000343550 ATP10DQ9P241 1426 aa23.98■■□□□ 1.43
USF2-202ENST00000343550 SENP3-EIF4A1A0A087X0R7 540 aa23.97■■□□□ 1.43
USF2-202ENST00000343550 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
USF2-202ENST00000343550 A0A0G2JLW4 131 aa23.96■■□□□ 1.43
USF2-202ENST00000343550 SLC39A6Q13433 755 aa23.96■■□□□ 1.43
USF2-202ENST00000343550 DNAJC10Q8IXB1 793 aa23.96■■□□□ 1.43
USF2-202ENST00000343550 GAS2L2Q8NHY3 880 aa23.96■■□□□ 1.43
USF2-202ENST00000343550 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
USF2-202ENST00000343550 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
USF2-202ENST00000343550 USP42Q9H9J4 1324 aaKnown RBP23.95■■□□□ 1.42
USF2-202ENST00000343550 MRC1P22897 1456 aa23.94■■□□□ 1.42
USF2-202ENST00000343550 ADCY9O60503 1353 aa23.94■■□□□ 1.42
USF2-202ENST00000343550 TJP1Q07157 1748 aa23.94■■□□□ 1.42
USF2-202ENST00000343550 FKBP8Q14318 412 aa23.94■■□□□ 1.42
USF2-202ENST00000343550 GPBP1L1Q9HC44 474 aaPredicted RBP23.94■■□□□ 1.42
USF2-202ENST00000343550 KIF13BQ9NQT8 1826 aa23.93■■□□□ 1.42
USF2-202ENST00000343550 GNAT3A8MTJ3 354 aa23.93■■□□□ 1.42
USF2-202ENST00000343550 CYP19A1P11511 503 aaPredicted RBP23.93■■□□□ 1.42
USF2-202ENST00000343550 C4AP0C0L4 1744 aa23.93■■□□□ 1.42
USF2-202ENST00000343550 DPEP1P16444 411 aa23.92■■□□□ 1.42
USF2-202ENST00000343550 PLEKHF1Q96S99 279 aa23.92■■□□□ 1.42
USF2-202ENST00000343550 BCS1LQ9Y276 419 aa23.92■■□□□ 1.42
USF2-202ENST00000343550 IL17REQ8NFR9 667 aa23.91■■□□□ 1.42
USF2-202ENST00000343550 ZNF526Q8TF50 670 aaPredicted RBP23.9■■□□□ 1.42
USF2-202ENST00000343550 ZPR1O75312 459 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms